Add initial spack.yaml and config (#5)

* Added initial spack.yaml and config

* Deleted versions.schema.json, added $schema property

* spack.yaml: Changed `spack.config.source_cache` to a string rather than array

* Changed spack-packages to 2024.05.21 and intel compiler to [email protected]

* Added newline

* Reformatting spack.yaml

* spack.yaml: Updated gcom4 to 2024.05.22 (HEAD of dev branch rather than master)

* spack.yaml: Added extra comments around the use of branches

* spack.yaml: Explicitly include cice4, um7, mom5

* spack.yaml: Added associated projections for cice4, um7, mom5, git attributes for mom5 and oasis3-mct

* spack.yaml: Removed git attributes on mom5, oasis3-mct

* spack.yaml: Updating the version of the overall model to 2024.05.1

* Changed to '@git.TAG=VERSION' syntax in spack.yaml, updated spack-packages to 2024.05.28

* Modified overall version of package to `2024.05.0`

* spack.yaml: Updated GCOM4 to 2024.05.28

* spack.yaml: Changed require versions back to branch

* spack.yaml: Modified the other requirements to use the @git.TAG=VERSION syntax

* spack.yaml: Constrained netcdf-*, hdf5 versions

netcdf-c @4.7.4 (same as ACCESS-OM2 MOM5)
netcdf-fortran @4.5.1
hdf5 @1.10.5

* spack.yaml: Updated netcdf-fortran to @4.6.1

* spack.yaml: Updating dependencies to be in line with ACCESS-NRI/spack-packages#121
netcdf-c uses gcc compiler
target updated to x86_64_v4
multiple updates to dependency versions

* Updated spack-packages/config, put spack.yaml versions in line with reproducible pre-industrial output

* spack.yaml: Update netcdf-fortran to 4.5.2

* spack.yaml: put um7 on access-esm1.5 branch, tagged new mom5 commit

* spack.yaml: Update modulefile version in line with package version

* spack.yaml: Update netcdf-c to 4.7.4

* spack.yaml: Updated comments

* spack.yaml: Updated um7 to 2024.07.03

* versions.json: Reverted to 2024.07.01 spack-config

* versions.json: spack-packages version to 2024.07.03, spack-config back to 2024.07.02

* versions.json: Updated to spack 0.22

* spack.yaml: hide_implicits: false and autoload: run

* spack-config 2024.07.05 using exclude_implicits: true

* versions.json: spack-packages 2024.07.05

* versions.json: Updated spack-packages 2024.07.07, rebuilding with ACCESS-NRI/spack@42e3100

* versions.json: Update spack-packages 2024.07.08

* versions.json: Update spack-packages 2024.07.10 (updated um7 spd)

Author: CodeGat

config/versions.json

@@ -0,0 +1,6 @@
+{
+    "$schema": "https://github.com/ACCESS-NRI/schema/blob/main/au.org.access-nri/model/deployment/config/versions/2-0-0.json",
+    "spack": "0.22",
+    "spack-packages": "2024.07.10",
+    "spack-config": "2024.07.05"
+}

spack.yaml

@@ -0,0 +1,84 @@
+# This is a Spack Environment file.
+#
+# It describes a set of packages to be installed, along with
+# configuration settings.
+spack:
+  specs:
+    - [email protected]
+  packages:
+    # Direct ACCESS-NRI dependencies
+    # Note: some packages have branch-specific logic and hence can't use
+    # the usual '@git.DATE' calver (https://calver.org) format, instead
+    # requiring a `@git.DATE=BRANCH` version.
+    mom5:
+      require:
+        - '@git.access-esm1.5_2024.06.20=access-esm1.5'
+    cice4:
+      require:
+        - '@git.2024.05.21=access-esm1.5'
+    um7:
+      require:
+        - '@git.2024.07.03=access-esm1.5'
+    # Lower-level ACCESS-NRI dependencies
+    gcom4:
+      require:
+        - '@git.2024.05.28=access-esm1.5'
+    oasis3-mct:
+      require:
+        - '@git.access-esm1.5_2024.05.24=access-esm1.5'
+    # Other dependencies
+    openmpi:
+      require:
+        - '@4.0.2'
+    netcdf-c:
+      require:
+        - '@4.7.4'
+    netcdf-fortran:
+      require:
+        - '@4.5.2'
+    hdf5:
+      require:
+        - '@1.10.11'
+
+    # Preferences for all packages
+    all:
+      require:
+        - '%[email protected]'
+        - 'target=x86_64_v4'
+  view: true
+  concretizer:
+    unify: true
+  modules:
+    default:
+      enable:
+        - tcl
+      roots:
+        tcl: $spack/../release/modules
+        lmod: $spack/../release/lmod
+      tcl:
+        hash_length: 0
+        include:
+          - access-esm1p5
+          - cice4
+          - um7
+          - mom5
+        exclude_implicits: true
+        all:
+          autoload: run
+          conflict:
+            - '{name}'
+          environment:
+            set:
+              'SPACK_{name}_ROOT': '{prefix}'
+        projections:
+          all: '{name}/{version}'
+          access-esm1p5: '{name}/2024.05.0'
+          cice4: '{name}/2024.05.21'
+          um7: '{name}/2024.07.03'
+          mom5: '{name}/access-esm1.5_2024.06.20'
+  config:
+    install_tree:
+      root: $spack/../restricted/ukmo/release
+    source_cache: $spack/../restricted/ukmo/source_cache
+    build_stage:
+    - $TMPDIR/restricted/spack-stage