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VindeeRVindeeR
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first commit letting just the linters to work just focusing on the changes at hand
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‎.github/workflows/ci.yaml‎

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‎.github/workflows/codeql.yml‎

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# For most projects, this workflow file will not need changing; you simply need
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# to commit it to your repository.
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## For most projects, this workflow file will not need changing; you simply need
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## to commit it to your repository.
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##
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## You may wish to alter this file to override the set of languages analyzed,
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## or to provide custom queries or build logic.
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##
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## ******** NOTE ********
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## We have attempted to detect the languages in your repository. Please check
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## the `language` matrix defined below to confirm you have the correct set of
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## supported CodeQL languages.
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##
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#name: "CodeQL Advanced"
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#
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# You may wish to alter this file to override the set of languages analyzed,
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# or to provide custom queries or build logic.
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#on:
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# push:
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# branches: [ "master" ]
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# pull_request:
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# branches: [ "master" ]
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# schedule:
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# - cron: '36 11 * * 6'
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#permissions:
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# contents: read
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#
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# ******** NOTE ********
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# We have attempted to detect the languages in your repository. Please check
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# the `language` matrix defined below to confirm you have the correct set of
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# supported CodeQL languages.
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#jobs:
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# analyze:
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# name: Analyze (${{ matrix.language }})
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# # Runner size impacts CodeQL analysis time. To learn more, please see:
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# # - https://gh.io/recommended-hardware-resources-for-running-codeql
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# # - https://gh.io/supported-runners-and-hardware-resources
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# # - https://gh.io/using-larger-runners (GitHub.com only)
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# # Consider using larger runners or machines with greater resources for possible analysis time improvements.
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# runs-on: ${{ (matrix.language == 'swift' && 'macos-latest') || 'ubuntu-latest' }}
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# permissions:
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# # required for all workflows
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# security-events: write
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#
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name: "CodeQL Advanced"
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on:
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push:
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branches: [ "master" ]
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pull_request:
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branches: [ "master" ]
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schedule:
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- cron: '36 11 * * 6'
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permissions:
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contents: read
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jobs:
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analyze:
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name: Analyze (${{ matrix.language }})
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# Runner size impacts CodeQL analysis time. To learn more, please see:
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# - https://gh.io/recommended-hardware-resources-for-running-codeql
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# - https://gh.io/supported-runners-and-hardware-resources
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# - https://gh.io/using-larger-runners (GitHub.com only)
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# Consider using larger runners or machines with greater resources for possible analysis time improvements.
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runs-on: ${{ (matrix.language == 'swift' && 'macos-latest') || 'ubuntu-latest' }}
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permissions:
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# required for all workflows
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security-events: write
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# required to fetch internal or private CodeQL packs
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packages: read
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# only required for workflows in private repositories
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actions: read
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contents: read
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strategy:
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fail-fast: false
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matrix:
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include:
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- language: python
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build-mode: none
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# CodeQL supports the following values keywords for 'language': 'c-cpp', 'csharp', 'go', 'java-kotlin', 'javascript-typescript', 'python', 'ruby', 'swift'
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# Use `c-cpp` to analyze code written in C, C++ or both
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# Use 'java-kotlin' to analyze code written in Java, Kotlin or both
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# Use 'javascript-typescript' to analyze code written in JavaScript, TypeScript or both
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# To learn more about changing the languages that are analyzed or customizing the build mode for your analysis,
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# see https://docs.github.com/en/code-security/code-scanning/creating-an-advanced-setup-for-code-scanning/customizing-your-advanced-setup-for-code-scanning.
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# If you are analyzing a compiled language, you can modify the 'build-mode' for that language to customize how
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# your codebase is analyzed, see https://docs.github.com/en/code-security/code-scanning/creating-an-advanced-setup-for-code-scanning/codeql-code-scanning-for-compiled-languages
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steps:
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- name: Checkout repository
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uses: actions/checkout@v5
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# Initializes the CodeQL tools for scanning.
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- name: Initialize CodeQL
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uses: github/codeql-action/init@v3
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with:
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languages: ${{ matrix.language }}
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build-mode: ${{ matrix.build-mode }}
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# If you wish to specify custom queries, you can do so here or in a config file.
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# By default, queries listed here will override any specified in a config file.
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# Prefix the list here with "+" to use these queries and those in the config file.
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config-file: ./.github/codeql/codeql-config.yml
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# For more details on CodeQL's query packs, refer to: https://docs.github.com/en/code-security/code-scanning/automatically-scanning-your-code-for-vulnerabilities-and-errors/configuring-code-scanning#using-queries-in-ql-packs
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# queries: security-extended,security-and-quality
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# If the analyze step fails for one of the languages you are analyzing with
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# "We were unable to automatically build your code", modify the matrix above
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# to set the build mode to "manual" for that language. Then modify this step
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# to build your code.
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# ℹ️ Command-line programs to run using the OS shell.
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# 📚 See https://docs.github.com/en/actions/using-workflows/workflow-syntax-for-github-actions#jobsjob_idstepsrun
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- if: matrix.build-mode == 'manual'
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shell: bash
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run: |
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echo 'If you are using a "manual" build mode for one or more of the' \
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'languages you are analyzing, replace this with the commands to build' \
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'your code, for example:'
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echo ' make bootstrap'
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echo ' make release'
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exit 1
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- name: Perform CodeQL Analysis
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uses: github/codeql-action/analyze@v3
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with:
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category: "/language:${{matrix.language}}"
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# # required to fetch internal or private CodeQL packs
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# packages: read
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#
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# # only required for workflows in private repositories
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# actions: read
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# contents: read
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#
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# strategy:
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# fail-fast: false
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# matrix:
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# include:
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# - language: python
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# build-mode: none
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# # CodeQL supports the following values keywords for 'language': 'c-cpp', 'csharp', 'go', 'java-kotlin', 'javascript-typescript', 'python', 'ruby', 'swift'
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# # Use `c-cpp` to analyze code written in C, C++ or both
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# # Use 'java-kotlin' to analyze code written in Java, Kotlin or both
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# # Use 'javascript-typescript' to analyze code written in JavaScript, TypeScript or both
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# # To learn more about changing the languages that are analyzed or customizing the build mode for your analysis,
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# # see https://docs.github.com/en/code-security/code-scanning/creating-an-advanced-setup-for-code-scanning/customizing-your-advanced-setup-for-code-scanning.
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# # If you are analyzing a compiled language, you can modify the 'build-mode' for that language to customize how
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# # your codebase is analyzed, see https://docs.github.com/en/code-security/code-scanning/creating-an-advanced-setup-for-code-scanning/codeql-code-scanning-for-compiled-languages
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# steps:
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# - name: Checkout repository
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# uses: actions/checkout@v5
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#
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# # Initializes the CodeQL tools for scanning.
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# - name: Initialize CodeQL
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# uses: github/codeql-action/init@v3
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# with:
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# languages: ${{ matrix.language }}
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# build-mode: ${{ matrix.build-mode }}
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# # If you wish to specify custom queries, you can do so here or in a config file.
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# # By default, queries listed here will override any specified in a config file.
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# # Prefix the list here with "+" to use these queries and those in the config file.
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# config-file: ./.github/codeql/codeql-config.yml
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#
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# # For more details on CodeQL's query packs, refer to: https://docs.github.com/en/code-security/code-scanning/automatically-scanning-your-code-for-vulnerabilities-and-errors/configuring-code-scanning#using-queries-in-ql-packs
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# # queries: security-extended,security-and-quality
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#
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# # If the analyze step fails for one of the languages you are analyzing with
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# # "We were unable to automatically build your code", modify the matrix above
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# # to set the build mode to "manual" for that language. Then modify this step
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# # to build your code.
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# # ℹ️ Command-line programs to run using the OS shell.
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# # 📚 See https://docs.github.com/en/actions/using-workflows/workflow-syntax-for-github-actions#jobsjob_idstepsrun
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# - if: matrix.build-mode == 'manual'
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# shell: bash
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# run: |
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# echo 'If you are using a "manual" build mode for one or more of the' \
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# 'languages you are analyzing, replace this with the commands to build' \
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# 'your code, for example:'
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# echo ' make bootstrap'
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# echo ' make release'
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# exit 1
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#
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# - name: Perform CodeQL Analysis
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# uses: github/codeql-action/analyze@v3
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# with:
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# category: "/language:${{matrix.language}}"

‎.github/workflows/docker.yaml‎

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on:
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pull_request:
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workflow_dispatch:
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push:
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branches:
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- main
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- master
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permissions:
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contents: read
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jobs:
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build-docker-images:
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name: Build Docker images
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env:
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DOCKERHUB_SECRET: ${{ secrets.DOCKERHUB_TOKEN }}
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# NOTE: Secrets are not available for external contributors, so we skip the job.
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if: ${{ secrets.DOCKERHUB_TOKEN }}
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runs-on: ubuntu-latest
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timeout-minutes: 15
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steps:
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- name: Checkout
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uses: actions/checkout@v5
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- name: Login to Docker Hub
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uses: docker/login-action@v3
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with:
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username: ${{ vars.DOCKERHUB_USERNAME }}
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password: ${{ secrets.DOCKERHUB_TOKEN }}
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- name: Set up QEMU
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uses: docker/setup-qemu-action@v3
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- name: Set up Docker Buildx
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uses: docker/setup-buildx-action@v3
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- name: Build and push
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uses: docker/build-push-action@v6
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with:
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context: docker
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# TODO: for a separate issue, try pushing it
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push: false
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load: true
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tags: autosubmit/autosubmit:latest
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- name: Test the image
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run: |
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docker run --rm autosubmit/autosubmit:latest autosubmit --version
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# https://github.com/BSC-ES/autosubmit/issues/2359
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docker run --rm autosubmit/autosubmit:latest /bin/bash -c '[ -n $USER ] || exit 1'
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#on:
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# pull_request:
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# workflow_dispatch:
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# push:
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# branches:
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# - main
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# - master
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#permissions:
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# contents: read
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#
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#jobs:
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# build-docker-images:
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# name: Build Docker images
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# env:
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# DOCKERHUB_SECRET: ${{ secrets.DOCKERHUB_TOKEN }}
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# # NOTE: Secrets are not available for external contributors, so we skip the job.
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# if: ${{ secrets.DOCKERHUB_TOKEN }}
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# runs-on: ubuntu-latest
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# timeout-minutes: 15
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#
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# steps:
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# - name: Checkout
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# uses: actions/checkout@v5
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#
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# - name: Login to Docker Hub
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# uses: docker/login-action@v3
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# with:
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# username: ${{ vars.DOCKERHUB_USERNAME }}
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# password: ${{ secrets.DOCKERHUB_TOKEN }}
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#
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# - name: Set up QEMU
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# uses: docker/setup-qemu-action@v3
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#
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# - name: Set up Docker Buildx
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# uses: docker/setup-buildx-action@v3
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#
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# - name: Build and push
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# uses: docker/build-push-action@v6
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# with:
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# context: docker
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# # TODO: for a separate issue, try pushing it
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# push: false
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# load: true
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# tags: autosubmit/autosubmit:latest
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#
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# - name: Test the image
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# run: |
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# docker run --rm autosubmit/autosubmit:latest autosubmit --version
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# # https://github.com/BSC-ES/autosubmit/issues/2359
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# docker run --rm autosubmit/autosubmit:latest /bin/bash -c '[ -n $USER ] || exit 1'

‎.github/workflows/lint.yml‎

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name: Lint
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on:
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pull_request:
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workflow_dispatch:
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push:
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branches:
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- main
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- master
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permissions:
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contents: read
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jobs:
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mypy:
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runs-on: ubuntu-latest
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steps:
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- name: Checkout code
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uses: actions/checkout@v5
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- name: Set up Python
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uses: actions/setup-python@v6
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with:
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python-version: ${{ matrix.python-version }}
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- name: Install mypy
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run: pip install mypy
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- name: Run mypy
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uses: sasanquaneuf/mypy-github-action@releases/v1
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with:
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checkName: 'mypy'
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env:
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GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
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lint:
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runs-on: ubuntu-latest
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steps:
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- name: Checkout code
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uses: actions/checkout@v5
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- name: Set up Python
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uses: actions/setup-python@v6
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with:
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python-version: ${{ matrix.python-version }}
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- name: Install Ruff
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run: pip install ruff
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- name: Run Ruff
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run: ruff check . --exit-zero

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