Fixes multiple issues with dependencies (#2241)

* "Fix"

* bump version

* (wip)

* (wip)

* add regresion test ( will fail )

* Add readme

* Add readme

* Missing file not added

* readme crashing the test

* adding doc tests

* adding doc tests

* improve output

* Automatic tests working, some failing as expected

* Better test

* improve test

* add more test cases

* Lint + rollback to 4.1.10

* Lint + rollback to 4.1.10

* re-added the fix for monarch with tests passing

* added script to anon a configuration

* Auto keyword readded

* added more tests cases

* Moved unused regression tests to another folder

Normalized the new regression test

* Trying to add regression into the git actions

* Trying to add regression into the git actions

* using absolute paths

* using absolute paths

* changelog

* Modify readme

* Modify readme

* Modify readme

* Added a flag to add new tests

* Added a flag to add new tests

* lint

* typo

Author: dbeltrankyl

.github/workflows/ci.yaml

@@ -75,6 +75,15 @@ jobs:
             test/integration \
             -m ''
 
+      # Run regression tests
+      - name: Regression tests
+        run: |
+          pytest \
+            --cov=autosubmit --cov-config=.coveragerc \
+            --cov-report=xml:test/coverage.xml --cov-append \
+            test/regression \
+            -m ''
+
       - name: Coverage report
         run: |
           coverage xml

CHANGELOG.md

@@ -1,3 +1,8 @@
+### 4.1.13: Dependencies bug fixes, regression tests
+
+- Fixed issues with dependencies not being correctly set or not being pruned. [#2184](https://github.com/BSC-ES/autosubmit/issues/2184) [PR](https://github.com/BSC-ES/autosubmit/pull/2241)
+- Added dependencies regression test [PR](https://github.com/BSC-ES/autosubmit/pull/2241)
+
 ### 4.1.12: Logs, Memory, DB fixes. Enhancements, new features, and overall bug fixes.
 
 **Mem fixes:** [PR](https://github.com/BSC-ES/autosubmit/pull/2130)

VERSION

@@ -1 +1 @@
-4.1.12
+4.1.13

autosubmit/autosubmit.py

@@ -4648,7 +4648,7 @@ def detail(job_list):
                     current_length) + " jobs.")
         else:
             Log.info(job_list.print_with_status())
-            Log.status(job_list.print_with_status())
+            Log.status(job_list.print_with_status(nocolor=True))
 
 
     @staticmethod

autosubmit/job/job_list.py

@@ -1,6 +1,6 @@
 [pytest]
 addopts =
-    --verbose --ignore=regression
+    --verbose
     --strict-markers
     --doctest-modules
     -n auto --max-worker-restart 0 --dist loadgroup