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Just noticed that the V4 primers being used in the weight assembly scripts are using the old EMP primers (ex here). A few years back these were modified slightly and degeneracy added (as described here). I'm not sure if this would have any real significant effect but might be worth updating nevertheless.
Primers currently being used in weight assembly:
FWD: GTGCCAGCMGCCGCGGTAA
REV: GGACTACHVGGGTWTCTAAT
Recommended update to new EMP primers:
FWD: GTGYCAGCMGCCGCGGTAA;
REV: GGACTACNVGGGTWTCTAAT
The text was updated successfully, but these errors were encountered:
Just noticed that the V4 primers being used in the weight assembly scripts are using the old EMP primers (ex here). A few years back these were modified slightly and degeneracy added (as described here). I'm not sure if this would have any real significant effect but might be worth updating nevertheless.
Primers currently being used in weight assembly:
FWD: GTGCCAGCMGCCGCGGTAA
REV: GGACTACHVGGGTWTCTAAT
Recommended update to new EMP primers:
FWD: GTGYCAGCMGCCGCGGTAA;
REV: GGACTACNVGGGTWTCTAAT
The text was updated successfully, but these errors were encountered: