From 052963cef9383b46c91a0072bb71da5993945215 Mon Sep 17 00:00:00 2001 From: saquino0827 Date: Thu, 5 Dec 2024 09:45:51 -0600 Subject: [PATCH 1/2] Update LA example files --- ...hl7_translation_final_obr_flatten_ex_1.hl7 | 56 - ...R01_NBS_obr_flatten_0_initial_message.hl7} | 0 ...R01_NBS_obr_flatten_1_hl7_translation.fhir | 11487 ++++++++++++++++ ...NBS_obr_flatten_2_fhir_transformation.fhir | 8702 ++++++++++++ ...BS_obr_flatten_3_hl7_translation_final.hl7 | 1 + ...1_NBS_obr_flatten_2_0_initial_message.hl7} | 0 ...1_NBS_obr_flatten_2_1_hl7_translation.fhir | 11411 +++++++++++++++ ...S_obr_flatten_2_2_fhir_transformation.fhir | 8626 ++++++++++++ ...obr_flatten_2_3_hl7_translation_final.hl7} | 0 9 files changed, 40227 insertions(+), 56 deletions(-) delete mode 100644 examples/LA/003_LA_ORU_R01_NBS_3_hl7_translation_final_obr_flatten_ex_1.hl7 rename examples/LA/{003_LA_ORU_R01_NBS_0_initial_obr_flatten_example_1.hl7 => 003_LA_ORU_R01_NBS_obr_flatten_0_initial_message.hl7} (100%) create mode 100644 examples/LA/003_LA_ORU_R01_NBS_obr_flatten_1_hl7_translation.fhir create mode 100644 examples/LA/003_LA_ORU_R01_NBS_obr_flatten_2_fhir_transformation.fhir create mode 100644 examples/LA/003_LA_ORU_R01_NBS_obr_flatten_3_hl7_translation_final.hl7 rename examples/LA/{004_LA_ORU_R01_NBS_0_initial_obr_flatten_example_2.hl7 => 004_LA_ORU_R01_NBS_obr_flatten_2_0_initial_message.hl7} (100%) create mode 100644 examples/LA/004_LA_ORU_R01_NBS_obr_flatten_2_1_hl7_translation.fhir create mode 100644 examples/LA/004_LA_ORU_R01_NBS_obr_flatten_2_2_fhir_transformation.fhir rename examples/LA/{004_LA_ORU_R01_NBS_3_hl7_translation_final_obr_flatten_example_2.hl7 => 004_LA_ORU_R01_NBS_obr_flatten_2_3_hl7_translation_final.hl7} (100%) diff --git a/examples/LA/003_LA_ORU_R01_NBS_3_hl7_translation_final_obr_flatten_ex_1.hl7 b/examples/LA/003_LA_ORU_R01_NBS_3_hl7_translation_final_obr_flatten_ex_1.hl7 deleted file mode 100644 index 3fb50e61c..000000000 --- a/examples/LA/003_LA_ORU_R01_NBS_3_hl7_translation_final_obr_flatten_ex_1.hl7 +++ /dev/null @@ -1,56 +0,0 @@ -MSH|^~\&|Natus^natus.health.state.la.us^DNS|Louisiana Office of Public Health Laboratory^2.16.840.1.114222.4.3.26.3.1^ISO|Test Department of tests^1.2.840.114350.1.13.286.2.7.2.695071^ISO|^simulated-hospital-id^L,M,N|20240101050000+0000||ORU^R01^ORU_R01|20240101050000_0001|T|2.5.1|||AL|AL|||||LRI_NG_FRN_PROFILE^^2.16.840.1.113883.9.195.3.4^ISO~LRI_NDBS_COMPONENT^^2.16.840.1.113883.9.195.3.6^ISO~LAB_PRN_Component^^2.16.840.1.113883.9.81^ISO~LAB_TO_COMPONENT^^2.16.840.1.113883.9.22^ISO -PID|1||1234567^^^^MR||TEST^BABY^ISO^^^^L||20240101011300||||123 TEST ST^^TESTVILLE^LA^12345^^H|||||||||||||||||||N -NK1|1|TEST^PARENT^^^^^L|MTH^Mother^HL70063|123 TEST ST^^TESTVILLE^LA^12345^^H|^^PH^^^111^2223333^^^^^1112223333 -ORC|RE||20243334444^Louisiana Office of Public Health Laboratory^2.16.840.1.114222.4.3.26.3.1^ISO||||||||||||||||||||||||||||54089-8^Newborn screening panel American Health Information Community (AHIC)^LN -OBR|1||20243334444^Louisiana Office of Public Health Laboratory^2.16.840.1.114222.4.3.26.3.1^ISO|54089-8^Newborn Screening Report summary panel^LN|||20240101050000||||O||||||||||||||P||||^20243334444&Louisiana Office of Public Health Laboratory&2.16.840.1.114222.4.3.26.3.1&ISO|||||||||||||||||||||54089-8^Newborn screening panel American Health Information Community (AHIC)^LN -OBX|1|CWE|57718-9^Sample quality of Dried blood spot^LN||LA12432-3^Acceptable^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP -OBX|2|CWE|57130-7^Newborn screening report - overall interpretation^LN||LA12428-1^All screening is in range for the conditions tested^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP -OBX|3|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12532-0^BIO^LN||||||P|||20240101050000|||||||||LDH - Office of Public OBX|3|CWE|57719-7|^3^1|LA12538-7^CH^LN -OBX|4|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12520-5^PKU^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|5|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12513-0^MSUD^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|6|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12496-8^HCY^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|7|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12482-8^CIT-I^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|8|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12529-6^TYR-II^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|9|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12470-3^ARG^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|10|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12528-8^TYR-1^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|11|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12482-8^CIT-I^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|12|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12509-8^MCAD^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|13|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12531-2^VLCAD^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|14|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12507-2^LCHAD^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|15|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12524-7^SCAD^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|16|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12524-7^SCAD^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|17|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12485-1^CPT-Ia^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|18|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12533-8^CAH^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|19|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12578-3^IVA or 2MBG or GA-2 or EMA^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|20|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12493-5^GA-1^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|21|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12495-0^GA-2^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|22|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12466-1^3-MCC^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|23|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12474-5^BKT^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|24|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12508-0^MAL^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|25|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12543-7^GALT^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|26|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12537-9^CF^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|27|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA16207-5^Hemoglobinopathies^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP -OBX|28|NM|8339-4^Body weight\S\at birth^LN||3050|g^Grams^UCUM|||||O||||||||||||||||||QST|AOE -OBX|29|CWE|57721-3^Reason for lab test^LN||LA16473-3^Subsequent screen - reason unknown^LN||||||O||||||||||||||||||QST|AOE -OBX|30|TX|57723-9^Unique bar code number^LN||1234567||||||O||||||||||||||||||QST|AOE -OBX|31|NM|57714-8^Obstetric estimation of gestational age^LN||38|wk^Week^UCUM|||||O||||||||||||||||||QST|AOE -OBX|32|TX|62326-4^Post-discharge provider practice name^LN||8802||||||O||||||||||||||||||QST|AOE -OBX|33|CWE|46762-1^Congenital hypothyroidism newborn screen interpretation^LN^THYROID^Congenital Hypothyroidism (CH)^99LDH||LA18592-8^In range^LN^N^Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP -OBX|34|FT|57705-6^Congenital hypothyroidism newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP -OBX|35|CWE|46761-3^Biotinidase deficiency newborn screen interpretation^LN^BTD^Biotinidase^99LDH||LA18592-8^In range^LN^N^Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP -OBX|36|FT|57699-1^Biotinidase deficiency newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP -OBX|37|CWE|46733-2^Amino acidemias newborn screen interpretation^LN^AA^Amino Acid Profile**^99LDH||LA18592-8^In range^LN^N^No Elevations Detected Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP -OBX|38|FT|57710-6^Amino acidemias newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP -OBX|39|CWE|46736-5^Fatty acid oxidation defects newborn screen interpretation^LN^FA^Fatty Acid Profile*^99LDH||LA18592-8^In range^LN^N^No Elevations Detected Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP -OBX|40|FT|57709-8^Fatty acid oxidation defects newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP -OBX|41|CWE|46758-9^Congenital adrenal hyperplasia newborn screen interpretation^LN^CAH^Congenital Adrenal Hyperplasia (CAH)^99LDH||LA18592-8^In range^LN^N^Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP -OBX|42|FT|57706-4^Congenital adrenal hyperplasia newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP -OBX|43|CWE|46744-9^Organic acidemias newborn screen interpretation^LN^OA^Organic Acid Profile***^99LDH||LA18592-8^In range^LN^N^No Elevations Detected Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP -OBX|44|FT|57708-0^Organic acidemias defects newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP -OBX|45|CWE|46737-3^Galactosemias newborn screen interpretation^LN^GALT^Galactosemia^99LDH||LA18592-8^In range^LN^N^Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP -OBX|46|FT|57704-9^Galactosemias newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP -OBX|47|CWE|46769-6^Cystic fibrosis newborn screen interpretation^LN^CF^Cystic Fibrosis^99LDH||LA18592-8^In range^LN^N^Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP -OBX|48|FT|57707-2^Cystic fibrosis newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP -OBX|49|CWE|46740-7^Hemoglobin disorders newborn screen interpretation^LN^HGB^Hemoglobinopathy^99LDH||LA18592-8^In range^LN^FA^FA Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP -OBX|50|FT|57703-1^Hemoglobin disorders newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP -SPM|1|^20243334444&Louisiana Office of Public Health Laboratory&2.16.840.1.114222.4.3.26.3.1&ISO||440500007^Blood spot specimen^SCT|||||||||||||20240101050000^20240101050000|20240102050000 diff --git a/examples/LA/003_LA_ORU_R01_NBS_0_initial_obr_flatten_example_1.hl7 b/examples/LA/003_LA_ORU_R01_NBS_obr_flatten_0_initial_message.hl7 similarity index 100% rename from examples/LA/003_LA_ORU_R01_NBS_0_initial_obr_flatten_example_1.hl7 rename to examples/LA/003_LA_ORU_R01_NBS_obr_flatten_0_initial_message.hl7 diff --git a/examples/LA/003_LA_ORU_R01_NBS_obr_flatten_1_hl7_translation.fhir b/examples/LA/003_LA_ORU_R01_NBS_obr_flatten_1_hl7_translation.fhir new file mode 100644 index 000000000..5c561da2d --- /dev/null +++ b/examples/LA/003_LA_ORU_R01_NBS_obr_flatten_1_hl7_translation.fhir @@ -0,0 +1,11487 @@ +{ + "resourceType": "Bundle", + "id": "1733355126873395012.9d4541e2-f35d-42ad-a68b-d1dd64799e09", + "meta": { + "lastUpdated": "2024-12-04T23:32:06.874+00:00" + }, + "identifier": { + "system": "https://reportstream.cdc.gov/prime-router", + "value": "20240101050000_0001" + }, + "type": "message", + "timestamp": "2024-01-01T05:00:00.000+00:00", + "entry": [ + { + "fullUrl": "MessageHeader/1733355126888626591.39df71de-c20a-4fe0-b23e-13de04300b80", + "resource": { + "resourceType": "MessageHeader", + "id": "1733355126888626591.39df71de-c20a-4fe0-b23e-13de04300b80", + "meta": { + "tag": [ + { + "system": "http://terminology.hl7.org/CodeSystem/v2-0103", + "code": "T" + } + ] + }, + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/msh-message-header", + "extension": [ + { + "url": "MSH.7", + "valueString": "20240101050000+0000" + }, + { + "url": "MSH.15", + "valueString": "AL" + }, + { + "url": "MSH.16", + "valueString": "AL" + }, + { + "url": "MSH.21", + "valueIdentifier": { + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "2.16.840.1.113883.9.195.3.4" + }, + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueCode": "ISO" + } + ] + } + ], + "value": "LRI_NG_FRN_PROFILE" + } + }, + { + "url": "MSH.21", + "valueIdentifier": { + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "2.16.840.1.113883.9.195.3.6" + }, + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueCode": "ISO" + } + ] + } + ], + "value": "LRI_NDBS_COMPONENT" + } + }, + { + "url": "MSH.21", + "valueIdentifier": { + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "2.16.840.1.113883.9.81" + }, + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueCode": "ISO" + } + ] + } + ], + "value": "LAB_PRN_Component" + } + }, + { + "url": "MSH.21", + "valueIdentifier": { + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/assigning-authority", + "extension": [ + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id", + "valueString": "2.16.840.1.113883.9.22" + }, + { + "url": "https://reportstream.cdc.gov/fhir/StructureDefinition/universal-id-type", + "valueCode": "ISO" + } + ] + } + ], + "value": "LAB_TO_COMPONENT" + } + } + ] + } + ], + "eventCoding": { + 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example files with MSH.11 D value Co-authored-by: pluckyswan <96704946+pluckyswan@users.noreply.github.com> Co-authored-by: James Herr --- .../LA/003_LA_ORU_R01_NBS_obr_flatten_0_initial_message.hl7 | 2 +- .../LA/003_LA_ORU_R01_NBS_obr_flatten_1_hl7_translation.fhir | 2 +- .../003_LA_ORU_R01_NBS_obr_flatten_2_fhir_transformation.fhir | 2 +- .../003_LA_ORU_R01_NBS_obr_flatten_3_hl7_translation_final.hl7 | 2 +- .../LA/004_LA_ORU_R01_NBS_obr_flatten_2_0_initial_message.hl7 | 2 +- .../LA/004_LA_ORU_R01_NBS_obr_flatten_2_1_hl7_translation.fhir | 2 +- .../004_LA_ORU_R01_NBS_obr_flatten_2_2_fhir_transformation.fhir | 2 +- ...004_LA_ORU_R01_NBS_obr_flatten_2_3_hl7_translation_final.hl7 | 2 +- 8 files changed, 8 insertions(+), 8 deletions(-) diff --git a/examples/LA/003_LA_ORU_R01_NBS_obr_flatten_0_initial_message.hl7 b/examples/LA/003_LA_ORU_R01_NBS_obr_flatten_0_initial_message.hl7 index 7a64c1795..55b7d4c0b 100644 --- a/examples/LA/003_LA_ORU_R01_NBS_obr_flatten_0_initial_message.hl7 +++ b/examples/LA/003_LA_ORU_R01_NBS_obr_flatten_0_initial_message.hl7 @@ -1,4 +1,4 @@ -MSH|^~\&|Natus^natus.health.state.la.us^DNS|Louisiana Office of Public Health Laboratory^2.16.840.1.114222.4.3.26.3.1^ISO|Test Department of tests^1.2.840.114350.1.13.286.2.7.2.695071^ISO|^simulated-hospital-id^L,M,N|20240101050000+0000||ORU^R01^ORU_R01|20240101050000_0001|T|2.5.1|||AL|AL|||||LRI_NG_FRN_PROFILE^^2.16.840.1.113883.9.195.3.4^ISO~LRI_NDBS_COMPONENT^^2.16.840.1.113883.9.195.3.6^ISO~LAB_PRN_Component^^2.16.840.1.113883.9.81^ISO~LAB_TO_COMPONENT^^2.16.840.1.113883.9.22^ISO| +MSH|^~\&|Natus^natus.health.state.la.us^DNS|Louisiana Office of Public Health Laboratory^2.16.840.1.114222.4.3.26.3.1^ISO|Test Department of tests^1.2.840.114350.1.13.286.2.7.2.695071^ISO|^simulated-hospital-id^L,M,N|20240101050000+0000||ORU^R01^ORU_R01|20240101050000_0001|D|2.5.1|||AL|AL|||||LRI_NG_FRN_PROFILE^^2.16.840.1.113883.9.195.3.4^ISO~LRI_NDBS_COMPONENT^^2.16.840.1.113883.9.195.3.6^ISO~LAB_PRN_Component^^2.16.840.1.113883.9.81^ISO~LAB_TO_COMPONENT^^2.16.840.1.113883.9.22^ISO| PID|1||1234567^^^^MR||TEST^BABY^ISO^^^^L||20240101011300||||123 TEST ST^^TESTVILLE^LA^12345^^H^^|||||||||||||||||||N| NK1|1|TEST^PARENT^^^^^L|MTH^Mother^HL70063|123 TEST ST^^TESTVILLE^LA^12345^^H^^|^^PH^^^111^2223333^^^^^1112223333| ORC|RE||20243334444^Louisiana Office of Public Health Laboratory^2.16.840.1.114222.4.3.26.3.1^ISO||||||||||||||||||||||||||||54089-8^Newborn screening panel American Health Information Community (AHIC)^LN| diff --git a/examples/LA/003_LA_ORU_R01_NBS_obr_flatten_1_hl7_translation.fhir b/examples/LA/003_LA_ORU_R01_NBS_obr_flatten_1_hl7_translation.fhir index 5c561da2d..0eedb37d3 100644 --- a/examples/LA/003_LA_ORU_R01_NBS_obr_flatten_1_hl7_translation.fhir +++ b/examples/LA/003_LA_ORU_R01_NBS_obr_flatten_1_hl7_translation.fhir @@ -20,7 +20,7 @@ "tag": [ { "system": "http://terminology.hl7.org/CodeSystem/v2-0103", - "code": "T" + "code": "D" } ] }, diff --git a/examples/LA/003_LA_ORU_R01_NBS_obr_flatten_2_fhir_transformation.fhir b/examples/LA/003_LA_ORU_R01_NBS_obr_flatten_2_fhir_transformation.fhir index ecb2e910e..d312abf37 100644 --- a/examples/LA/003_LA_ORU_R01_NBS_obr_flatten_2_fhir_transformation.fhir +++ b/examples/LA/003_LA_ORU_R01_NBS_obr_flatten_2_fhir_transformation.fhir @@ -20,7 +20,7 @@ "tag": [ { "system": "http://terminology.hl7.org/CodeSystem/v2-0103", - "code": "T" + "code": "D" }, { "system": "http://localcodes.org/ETOR", diff --git a/examples/LA/003_LA_ORU_R01_NBS_obr_flatten_3_hl7_translation_final.hl7 b/examples/LA/003_LA_ORU_R01_NBS_obr_flatten_3_hl7_translation_final.hl7 index d0dba31ea..5869237bc 100644 --- a/examples/LA/003_LA_ORU_R01_NBS_obr_flatten_3_hl7_translation_final.hl7 +++ b/examples/LA/003_LA_ORU_R01_NBS_obr_flatten_3_hl7_translation_final.hl7 @@ -1 +1 @@ -MSH|^~\&|Natus^natus.health.state.la.us^DNS|Louisiana Office of Public Health Laboratory^2.16.840.1.114222.4.3.26.3.1^ISO|Test Department of tests^1.2.840.114350.1.13.286.2.7.2.695071^ISO|^simulated-hospital-id^L,M,N|20240101050000+0000||ORU^R01^ORU_R01|20240101050000_0001|T|2.5.1|||AL|AL|||||LRI_NG_FRN_PROFILE^^2.16.840.1.113883.9.195.3.4^ISO~LRI_NDBS_COMPONENT^^2.16.840.1.113883.9.195.3.6^ISO~LAB_PRN_Component^^2.16.840.1.113883.9.81^ISO~LAB_TO_COMPONENT^^2.16.840.1.113883.9.22^ISO PID|1||1234567^^^^MR||TEST^BABY^ISO^^^^L||20240101011300||||123 TEST ST^^TESTVILLE^LA^12345^^H|||||||||||||||||||N NK1|1|TEST^PARENT^^^^^L|MTH^Mother^HL70063|123 TEST ST^^TESTVILLE^LA^12345^^H|^^PH^^^111^2223333^^^^^1112223333 ORC|RE||20243334444^Louisiana Office of Public Health Laboratory^2.16.840.1.114222.4.3.26.3.1^ISO||||||||||||||||||||||||||||54089-8^Newborn screening panel American Health Information Community (AHIC)^LN OBR|1||20243334444^Louisiana Office of Public Health Laboratory^2.16.840.1.114222.4.3.26.3.1^ISO|54089-8^Newborn Screening Report summary panel^LN|||20240101050000||||O||||||||||||||P||||^20243334444&Louisiana Office of Public Health Laboratory&2.16.840.1.114222.4.3.26.3.1&ISO|||||||||||||||||||||54089-8^Newborn screening panel American Health Information Community (AHIC)^LN OBX|1|CWE|57718-9^Sample quality of Dried blood spot^LN||LA12432-3^Acceptable^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|2|CWE|57130-7^Newborn screening report - overall interpretation^LN||LA12428-1^All screening is in range for the conditions tested^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|3|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12532-0^BIO^LN||||||P|||20240101050000|||||||||LDH - Office of Public OBX|3|CWE|57719-7|^3^1|LA12538-7^CH^LN OBX|4|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12520-5^PKU^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|5|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12513-0^MSUD^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|6|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12496-8^HCY^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|7|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12482-8^CIT-I^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|8|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12529-6^TYR-II^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|9|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12470-3^ARG^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|10|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12528-8^TYR-1^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|11|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12482-8^CIT-I^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|12|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12509-8^MCAD^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|13|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12531-2^VLCAD^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|14|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12507-2^LCHAD^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|15|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12524-7^SCAD^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|16|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12524-7^SCAD^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|17|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12485-1^CPT-Ia^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|18|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12533-8^CAH^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|19|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12578-3^IVA or 2MBG or GA-2 or EMA^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|20|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12493-5^GA-1^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|21|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12495-0^GA-2^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|22|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12466-1^3-MCC^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|23|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12474-5^BKT^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|24|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12508-0^MAL^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|25|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12543-7^GALT^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|26|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12537-9^CF^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|27|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA16207-5^Hemoglobinopathies^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|28|NM|8339-4^Body weight\S\at birth^LN||3050|g^Grams^UCUM|||||O||||||||||||||||||QST|AOE OBX|29|CWE|57721-3^Reason for lab test^LN||LA16473-3^Subsequent screen - reason unknown^LN||||||O||||||||||||||||||QST|AOE OBX|30|TX|57723-9^Unique bar code number^LN||1234567||||||O||||||||||||||||||QST|AOE OBX|31|NM|57714-8^Obstetric estimation of gestational age^LN||38|wk^Week^UCUM|||||O||||||||||||||||||QST|AOE OBX|32|TX|62326-4^Post-discharge provider practice name^LN||8802||||||O||||||||||||||||||QST|AOE OBX|33|CWE|46762-1^Congenital hypothyroidism newborn screen interpretation^LN^THYROID^Congenital Hypothyroidism (CH)^99LDH||LA18592-8^In range^LN^N^Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|34|FT|57705-6^Congenital hypothyroidism newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|35|CWE|46761-3^Biotinidase deficiency newborn screen interpretation^LN^BTD^Biotinidase^99LDH||LA18592-8^In range^LN^N^Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|36|FT|57699-1^Biotinidase deficiency newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|37|CWE|46733-2^Amino acidemias newborn screen interpretation^LN^AA^Amino Acid Profile**^99LDH||LA18592-8^In range^LN^N^No Elevations Detected Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|38|FT|57710-6^Amino acidemias newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|39|CWE|46736-5^Fatty acid oxidation defects newborn screen interpretation^LN^FA^Fatty Acid Profile*^99LDH||LA18592-8^In range^LN^N^No Elevations Detected Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|40|FT|57709-8^Fatty acid oxidation defects newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|41|CWE|46758-9^Congenital adrenal hyperplasia newborn screen interpretation^LN^CAH^Congenital Adrenal Hyperplasia (CAH)^99LDH||LA18592-8^In range^LN^N^Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|42|FT|57706-4^Congenital adrenal hyperplasia newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|43|CWE|46744-9^Organic acidemias newborn screen interpretation^LN^OA^Organic Acid Profile***^99LDH||LA18592-8^In range^LN^N^No Elevations Detected Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|44|FT|57708-0^Organic acidemias defects newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|45|CWE|46737-3^Galactosemias newborn screen interpretation^LN^GALT^Galactosemia^99LDH||LA18592-8^In range^LN^N^Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|46|FT|57704-9^Galactosemias newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|47|CWE|46769-6^Cystic fibrosis newborn screen interpretation^LN^CF^Cystic Fibrosis^99LDH||LA18592-8^In range^LN^N^Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|48|FT|57707-2^Cystic fibrosis newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|49|CWE|46740-7^Hemoglobin disorders newborn screen interpretation^LN^HGB^Hemoglobinopathy^99LDH||LA18592-8^In range^LN^FA^FA Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|50|FT|57703-1^Hemoglobin disorders newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP SPM|1|^20243334444&Louisiana Office of Public Health Laboratory&2.16.840.1.114222.4.3.26.3.1&ISO||440500007^Blood spot specimen^SCT|||||||||||||20240101050000^20240101050000|20240102050000 +MSH|^~\&|Natus^natus.health.state.la.us^DNS|Louisiana Office of Public Health Laboratory^2.16.840.1.114222.4.3.26.3.1^ISO|Test Department of tests^1.2.840.114350.1.13.286.2.7.2.695071^ISO|^simulated-hospital-id^L,M,N|20240101050000+0000||ORU^R01^ORU_R01|20240101050000_0001|D|2.5.1|||AL|AL|||||LRI_NG_FRN_PROFILE^^2.16.840.1.113883.9.195.3.4^ISO~LRI_NDBS_COMPONENT^^2.16.840.1.113883.9.195.3.6^ISO~LAB_PRN_Component^^2.16.840.1.113883.9.81^ISO~LAB_TO_COMPONENT^^2.16.840.1.113883.9.22^ISO PID|1||1234567^^^^MR||TEST^BABY^ISO^^^^L||20240101011300||||123 TEST ST^^TESTVILLE^LA^12345^^H|||||||||||||||||||N NK1|1|TEST^PARENT^^^^^L|MTH^Mother^HL70063|123 TEST ST^^TESTVILLE^LA^12345^^H|^^PH^^^111^2223333^^^^^1112223333 ORC|RE||20243334444^Louisiana Office of Public Health Laboratory^2.16.840.1.114222.4.3.26.3.1^ISO||||||||||||||||||||||||||||54089-8^Newborn screening panel American Health Information Community (AHIC)^LN OBR|1||20243334444^Louisiana Office of Public Health Laboratory^2.16.840.1.114222.4.3.26.3.1^ISO|54089-8^Newborn Screening Report summary panel^LN|||20240101050000||||O||||||||||||||P||||^20243334444&Louisiana Office of Public Health Laboratory&2.16.840.1.114222.4.3.26.3.1&ISO|||||||||||||||||||||54089-8^Newborn screening panel American Health Information Community (AHIC)^LN OBX|1|CWE|57718-9^Sample quality of Dried blood spot^LN||LA12432-3^Acceptable^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|2|CWE|57130-7^Newborn screening report - overall interpretation^LN||LA12428-1^All screening is in range for the conditions tested^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|3|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12532-0^BIO^LN||||||P|||20240101050000|||||||||LDH - Office of Public OBX|3|CWE|57719-7|^3^1|LA12538-7^CH^LN OBX|4|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12520-5^PKU^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|5|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12513-0^MSUD^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|6|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12496-8^HCY^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|7|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12482-8^CIT-I^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|8|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12529-6^TYR-II^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|9|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12470-3^ARG^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|10|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12528-8^TYR-1^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|11|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12482-8^CIT-I^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|12|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12509-8^MCAD^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|13|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12531-2^VLCAD^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|14|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12507-2^LCHAD^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|15|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12524-7^SCAD^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|16|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12524-7^SCAD^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|17|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12485-1^CPT-Ia^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|18|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12533-8^CAH^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|19|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12578-3^IVA or 2MBG or GA-2 or EMA^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|20|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12493-5^GA-1^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|21|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12495-0^GA-2^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|22|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12466-1^3-MCC^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|23|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12474-5^BKT^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|24|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12508-0^MAL^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|25|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12543-7^GALT^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|26|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA12537-9^CF^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|27|CWE|57719-7^Conditions tested for in this newborn screening study [Identifier] in DBS^LN||LA16207-5^Hemoglobinopathies^LN||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||SCI|UNSP OBX|28|NM|8339-4^Body weight\S\at birth^LN||3050|g^Grams^UCUM|||||O||||||||||||||||||QST|AOE OBX|29|CWE|57721-3^Reason for lab test^LN||LA16473-3^Subsequent screen - reason unknown^LN||||||O||||||||||||||||||QST|AOE OBX|30|TX|57723-9^Unique bar code number^LN||1234567||||||O||||||||||||||||||QST|AOE OBX|31|NM|57714-8^Obstetric estimation of gestational age^LN||38|wk^Week^UCUM|||||O||||||||||||||||||QST|AOE OBX|32|TX|62326-4^Post-discharge provider practice name^LN||8802||||||O||||||||||||||||||QST|AOE OBX|33|CWE|46762-1^Congenital hypothyroidism newborn screen interpretation^LN^THYROID^Congenital Hypothyroidism (CH)^99LDH||LA18592-8^In range^LN^N^Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|34|FT|57705-6^Congenital hypothyroidism newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|35|CWE|46761-3^Biotinidase deficiency newborn screen interpretation^LN^BTD^Biotinidase^99LDH||LA18592-8^In range^LN^N^Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|36|FT|57699-1^Biotinidase deficiency newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|37|CWE|46733-2^Amino acidemias newborn screen interpretation^LN^AA^Amino Acid Profile**^99LDH||LA18592-8^In range^LN^N^No Elevations Detected Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|38|FT|57710-6^Amino acidemias newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|39|CWE|46736-5^Fatty acid oxidation defects newborn screen interpretation^LN^FA^Fatty Acid Profile*^99LDH||LA18592-8^In range^LN^N^No Elevations Detected Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|40|FT|57709-8^Fatty acid oxidation defects newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|41|CWE|46758-9^Congenital adrenal hyperplasia newborn screen interpretation^LN^CAH^Congenital Adrenal Hyperplasia (CAH)^99LDH||LA18592-8^In range^LN^N^Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|42|FT|57706-4^Congenital adrenal hyperplasia newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|43|CWE|46744-9^Organic acidemias newborn screen interpretation^LN^OA^Organic Acid Profile***^99LDH||LA18592-8^In range^LN^N^No Elevations Detected Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|44|FT|57708-0^Organic acidemias defects newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|45|CWE|46737-3^Galactosemias newborn screen interpretation^LN^GALT^Galactosemia^99LDH||LA18592-8^In range^LN^N^Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|46|FT|57704-9^Galactosemias newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|47|CWE|46769-6^Cystic fibrosis newborn screen interpretation^LN^CF^Cystic Fibrosis^99LDH||LA18592-8^In range^LN^N^Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|48|FT|57707-2^Cystic fibrosis newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|49|CWE|46740-7^Hemoglobin disorders newborn screen interpretation^LN^HGB^Hemoglobinopathy^99LDH||LA18592-8^In range^LN^FA^FA Normal^99LDH||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP OBX|50|FT|57703-1^Hemoglobin disorders newborn screening comment/discussion^LN||Normal||||||P|||20240101050000|||||||||LDH - Office of Public Health Laboratory|1209 Leesville Avenue^^Baton Rouge^LA^70802|||||RSLT|UNSP SPM|1|^20243334444&Louisiana Office of Public Health Laboratory&2.16.840.1.114222.4.3.26.3.1&ISO||440500007^Blood spot specimen^SCT|||||||||||||20240101050000^20240101050000|20240102050000 diff --git a/examples/LA/004_LA_ORU_R01_NBS_obr_flatten_2_0_initial_message.hl7 b/examples/LA/004_LA_ORU_R01_NBS_obr_flatten_2_0_initial_message.hl7 index cf679e454..2e16a3247 100644 --- a/examples/LA/004_LA_ORU_R01_NBS_obr_flatten_2_0_initial_message.hl7 +++ b/examples/LA/004_LA_ORU_R01_NBS_obr_flatten_2_0_initial_message.hl7 @@ -1,4 +1,4 @@ -MSH|^~\&|Natus^natus.health.state.la.us^DNS|Louisiana Office of Public Health Laboratory^2.16.840.1.114222.4.3.26.3.1^ISO|Test Department of tests^1.2.840.114350.1.13.286.2.7.2.695071^ISO||20240101011000+0000||ORU^R01^ORU_R01|20240101011000_0002|T|2.5.1|||AL|AL|||||LRI_NG_FRN_PROFILE^^2.16.840.1.113883.9.195.3.4^ISO~LRI_NDBS_COMPONENT^^2.16.840.1.113883.9.195.3.6^ISO~LAB_PRN_Component^^2.16.840.1.113883.9.81^ISO~LAB_TO_COMPONENT^^2.16.840.1.113883.9.22^ISO| +MSH|^~\&|Natus^natus.health.state.la.us^DNS|Louisiana Office of Public Health Laboratory^2.16.840.1.114222.4.3.26.3.1^ISO|Test Department of tests^1.2.840.114350.1.13.286.2.7.2.695071^ISO||20240101011000+0000||ORU^R01^ORU_R01|20240101011000_0002|D|2.5.1|||AL|AL|||||LRI_NG_FRN_PROFILE^^2.16.840.1.113883.9.195.3.4^ISO~LRI_NDBS_COMPONENT^^2.16.840.1.113883.9.195.3.6^ISO~LAB_PRN_Component^^2.16.840.1.113883.9.81^ISO~LAB_TO_COMPONENT^^2.16.840.1.113883.9.22^ISO| PID|1||01-01-01^^^^MR||TESTPATIENT^BABY^ISO^^^^L||20240101011000||||123 TEST ST^^TEST^LA^12345^^H^^|||||||||||||||||||N| NK1|1|TESTPATIENT^PARENT^^^^^L|MTH^Mother^HL70063|123 TEST ST^^TEST^LA^12345^^H^^|^^PH^^^222^1113333^^^^^2221113333| ORC|RE||01234567890^Louisiana Office of Public Health Laboratory^2.16.840.1.114222.4.3.26.3.1^ISO||||||||||||||||||||||||||||54089-8^Newborn screening panel American Health Information Community (AHIC)^LN| diff --git a/examples/LA/004_LA_ORU_R01_NBS_obr_flatten_2_1_hl7_translation.fhir b/examples/LA/004_LA_ORU_R01_NBS_obr_flatten_2_1_hl7_translation.fhir index 36b3698f5..2666bf239 100644 --- a/examples/LA/004_LA_ORU_R01_NBS_obr_flatten_2_1_hl7_translation.fhir +++ b/examples/LA/004_LA_ORU_R01_NBS_obr_flatten_2_1_hl7_translation.fhir @@ -20,7 +20,7 @@ "tag": [ { "system": "http://terminology.hl7.org/CodeSystem/v2-0103", - "code": "T" + "code": "D" } ] }, diff --git a/examples/LA/004_LA_ORU_R01_NBS_obr_flatten_2_2_fhir_transformation.fhir b/examples/LA/004_LA_ORU_R01_NBS_obr_flatten_2_2_fhir_transformation.fhir index 9162d378d..722e17877 100644 --- a/examples/LA/004_LA_ORU_R01_NBS_obr_flatten_2_2_fhir_transformation.fhir +++ b/examples/LA/004_LA_ORU_R01_NBS_obr_flatten_2_2_fhir_transformation.fhir @@ -20,7 +20,7 @@ "tag": [ { "system": "http://terminology.hl7.org/CodeSystem/v2-0103", - "code": "T" + "code": "D" }, { "system": "http://localcodes.org/ETOR", diff --git a/examples/LA/004_LA_ORU_R01_NBS_obr_flatten_2_3_hl7_translation_final.hl7 b/examples/LA/004_LA_ORU_R01_NBS_obr_flatten_2_3_hl7_translation_final.hl7 index 2e5e45377..b8f59fec7 100644 --- a/examples/LA/004_LA_ORU_R01_NBS_obr_flatten_2_3_hl7_translation_final.hl7 +++ b/examples/LA/004_LA_ORU_R01_NBS_obr_flatten_2_3_hl7_translation_final.hl7 @@ -1,4 +1,4 @@ -MSH|^~\&|Natus^natus.health.state.la.us^DNS|Louisiana Office of Public Health Laboratory^2.16.840.1.114222.4.3.26.3.1^ISO|Test Department of tests^1.2.840.114350.1.13.286.2.7.2.695071^ISO||20240101011000+0000||ORU^R01^ORU_R01|20240101011000_0002|T|2.5.1|||AL|AL|||||LRI_NG_FRN_PROFILE^^2.16.840.1.113883.9.195.3.4^ISO~LRI_NDBS_COMPONENT^^2.16.840.1.113883.9.195.3.6^ISO~LAB_PRN_Component^^2.16.840.1.113883.9.81^ISO~LAB_TO_COMPONENT^^2.16.840.1.113883.9.22^ISO +MSH|^~\&|Natus^natus.health.state.la.us^DNS|Louisiana Office of Public Health Laboratory^2.16.840.1.114222.4.3.26.3.1^ISO|Test Department of tests^1.2.840.114350.1.13.286.2.7.2.695071^ISO||20240101011000+0000||ORU^R01^ORU_R01|20240101011000_0002|D|2.5.1|||AL|AL|||||LRI_NG_FRN_PROFILE^^2.16.840.1.113883.9.195.3.4^ISO~LRI_NDBS_COMPONENT^^2.16.840.1.113883.9.195.3.6^ISO~LAB_PRN_Component^^2.16.840.1.113883.9.81^ISO~LAB_TO_COMPONENT^^2.16.840.1.113883.9.22^ISO PID|1||01-01-01^^^^MR||TESTPATIENT^BABY^ISO^^^^L||20240101011000||||123 TEST ST^^TEST^LA^12345^^H|||||||||||||||||||N NK1|1|TESTPATIENT^PARENT^^^^^L|MTH^Mother^HL70063|123 TEST ST^^TEST^LA^12345^^H|^^PH^^^222^1113333^^^^^2221113333 ORC|RE||01234567890^Louisiana Office of Public Health Laboratory^2.16.840.1.114222.4.3.26.3.1^ISO||||||||||||||||||||||||||||54089-8^Newborn screening panel American Health Information Community (AHIC)^LN