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| 1 | +==26201== Memcheck, a memory error detector |
| 2 | +==26201== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. |
| 3 | +==26201== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info |
| 4 | +==26201== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info |
| 5 | +==26201== Parent PID: 24005 |
| 6 | +==26201== |
| 7 | +==26201== |
| 8 | +==26201== FILE DESCRIPTORS: 9 open (3 std) at exit. |
| 9 | +==26201== Open file descriptor 12: |
| 10 | +==26201== at 0xF84807D: pipe (pipe.c:29) |
| 11 | +==26201== by 0x196FE07D: ??? |
| 12 | +==26201== by 0x14D0A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) |
| 13 | +==26201== by 0x114A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) |
| 14 | +==26201== by 0x1143DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) |
| 15 | +==26201== by 0x10134D38: PetscInitialize (pinit.c:924) |
| 16 | +==26201== by 0xF14B1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) |
| 17 | +==26201== by 0xF14B227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) |
| 18 | +==26201== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) |
| 19 | +==26201== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) |
| 20 | +==26201== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) |
| 21 | +==26201== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) |
| 22 | +==26201== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) |
| 23 | +==26201== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) |
| 24 | +==26201== |
| 25 | +==26201== Open file descriptor 8: /dev/shm/open_mpi.0000 |
| 26 | +==26201== at 0xF84CA1C: __open_nocancel (open64_nocancel.c:39) |
| 27 | +==26201== by 0xF7D0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) |
| 28 | +==26201== by 0xF180822: ??? |
| 29 | +==26201== by 0xF18096F: ??? |
| 30 | +==26201== by 0x14DAF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) |
| 31 | +==26201== by 0x14DAF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) |
| 32 | +==26201== by 0x14D65922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) |
| 33 | +==26201== by 0x14D0A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) |
| 34 | +==26201== by 0x114A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) |
| 35 | +==26201== by 0x1143DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) |
| 36 | +==26201== by 0x10134D38: PetscInitialize (pinit.c:924) |
| 37 | +==26201== by 0xF14B1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) |
| 38 | +==26201== by 0xF14B227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) |
| 39 | +==26201== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) |
| 40 | +==26201== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) |
| 41 | +==26201== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) |
| 42 | +==26201== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) |
| 43 | +==26201== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) |
| 44 | +==26201== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) |
| 45 | +==26201== |
| 46 | +==26201== Open file descriptor 158: |
| 47 | +==26201== <inherited from parent> |
| 48 | +==26201== |
| 49 | +==26201== Open file descriptor 155: |
| 50 | +==26201== <inherited from parent> |
| 51 | +==26201== |
| 52 | +==26201== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt |
| 53 | +==26201== <inherited from parent> |
| 54 | +==26201== |
| 55 | +==26201== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp |
| 56 | +==26201== <inherited from parent> |
| 57 | +==26201== |
| 58 | +==26201== |
| 59 | +==26201== HEAP SUMMARY: |
| 60 | +==26201== in use at exit: 618,370 bytes in 8,239 blocks |
| 61 | +==26201== total heap usage: 1,124,507 allocs, 1,116,268 frees, 1,415,941,962 bytes allocated |
| 62 | +==26201== |
| 63 | +==26201== LEAK SUMMARY: |
| 64 | +==26201== definitely lost: 0 bytes in 0 blocks |
| 65 | +==26201== indirectly lost: 0 bytes in 0 blocks |
| 66 | +==26201== possibly lost: 0 bytes in 0 blocks |
| 67 | +==26201== still reachable: 56 bytes in 3 blocks |
| 68 | +==26201== suppressed: 618,314 bytes in 8,236 blocks |
| 69 | +==26201== Reachable blocks (those to which a pointer was found) are not shown. |
| 70 | +==26201== To see them, rerun with: --leak-check=full --show-leak-kinds=all |
| 71 | +==26201== |
| 72 | +==26201== For lists of detected and suppressed errors, rerun with: -s |
| 73 | +==26201== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37) |
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