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getpapers-eupmc-queries.md

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Official Documentation, Appendix 1

Restrict search by bibliographic metadata

Field Description Example
PMCID: Search for a publication by its PubMed Central ID, where applicable (i.e. available as full text) PMCID:PMC1287967
TITLE: Search for a term or terms in publication titles TITLE:aspirin, TITLE:”protein knowledgebase”
ABSTRACT: Search for a term or terms in publication abstracts ABSTRACT:malaria, ABSTRACT:”chicken pox”
AUTH: Search for a surname and (optionally) initial(s) in publication author lists AUTH:einstein, AUTH:”Smith AB”
JOURNAL: Journal title – searchable either in full or abbreviated form JOURNAL:”biology letters”, JOURNAL:”biol lett”
LICENSE: Search for content according to the assigned Creative Commons license (where provided). LICENSE:"cc by" OR LICENSE:"cc-by", LICENSE:cc
PUB_YEAR: Search by year of publication in YYYY format; note syntax for range searching. PUB_YEAR:2000, PUB_YEAR:[2000 TO 2001]
E_PDATE: Electronic publication date, when an article was first published online. E_PDATE:2013-12-15, E_PDATE:20070930, E_PDATE:[2000-12-18 TO 2014-12-30], E_PDATE:[20040101 TO 20140101]
FIRST_PDATE: The date of first publication, whichever is first, electronic or print publication. Where a date is not fully available e.g. year only, an algorithm is applied to determine the value. FIRST_PDATE:1995-02-01, FIRST_PDATE:20000101, FIRST_PDATE:[2000-10-14 TO 2010-11-15], FIRST_PDATE:[20040101 TO 20140101]
P_PDATE: Print publication date of journal issue, when an article appeared in print format. P_PDATE:1982-10-01, P_PDATE:20140101, P_PDATE:[2000-12-18 TO 2014-12-30], P_PDATE:[20031114 TO 20141115]

Restrict by article metadata

Field Description Example
DISEASE: Search for mined diseases DISEASE:dysthymias
GENE_PROTEIN: Search for records that have GENE_PROTEINS mined GENE_PROTEIN:gng11
GOTERM: Search for records that have GOTERM mined GOTERM:apoptosis
CHEM: Limit your search by MeSH substance CHEM:propantheline, CHEM:”protein kinases”
ORGANISM: Search for mined organisms ORGANISM:terebratulide
PUB_TYPE: Limit your search by publication type PUB_TYPE:review, PUB_TYPE:”retraction of publication”

Section-level search

Field Description Example
INTRO: Find articles with a phrase in the Introduction & Background section INTRO:“protein interactions”
METHODS: Find articles with a phrase in the Materials & Methods section METHODS:“yeast two-hybrid”
RESULTS: Find articles with a phrase in the Results section RESULTS:"in vivo"
DISCUSS: Find articles with a phrase in the Discussion seciton DISCUSS:cardivascular
ACK_FUND: Find articles with a phrase in the Acknowledgements & Funding section ACK_FUND:ERC