- Unpin bgzip upper bound (#416)
- Pass cloud platform when resolving a DRS URI (#414)
- Remove Martha and Bond References (#411)
- Tell DRSHub its TNU a-knockin (#413)
Removed all references to Martha and Bond, which have been replace by DRSHub and External Credentials Manager, respectively.
Removed DRS_RESOLVER environment variable, instead relying on DRS_RESOLVER_ENDPOINT to let the endpoint version be controlled externally.
Added support for calling DRSHub for DRS resolution
Made DRS Resolver configurable by setting DRS_RESOLVER to martha or drshub
Better error handling. (#387) Update contact info in README.
Raise TypeError if table object is forbidden (#275) Support table cells with dict values (#274) Force string type names for Terra table entities (#273)
Assume False if callCaching not in workflow data (#272) Make table API call chunk size configurable (#271) Fix race condition in async context manager (#270) Include persistent disk in cost estimate (#269) Refactor JMESPath getter, move to utils (#268) Introduce persistent disk cost item (#267) Include subworkflows in cost estimates (#265) Method to get all (sub-)workflows for a submission. (#264) Introduce function to perform concurrent recursion (#266) Don't attempt to estimate subworkflow costs (#263) More descriptive workflow metadata parsing (#262) Simplify cost calculations (#261) Use explicit workspace and namespace args (#260) Clean out cruft (#259) Introduce refactored table unit tests (#258) Introduce table delete convenience methods (#257) Introduce table upload convenience methods (#256) Refactor table.get_row (#255) Remove table.list_entities (#254) Refactor table deletion (#253) Remove table._get_item (#252) Remove table.print_column (#250) CLI tests fixups (#251) Clean up failed local DRS downloads (#248) Refactor table row listing (#249) Refactor list_tables (#247) Ensure thread safety of fiss sessions (#246) Context manager to delete Terra data tables (#245) Context manager to upload Terra data tables (#244) Introduce async context manager utility (#243) Improve cost reporting for call-cached workflows. (#241) Reorganize cost metadata parsing (#240) Use JMESPath to extract cost metadata (#239) Improve cost estimator code quality (#238) Remove outdated testing notes (#237) Remove CLI argument manipulation (#230) Give name of task when estimating costs (#236) Add version information to CLI (#228) Move DRS head stdout to CLI only. (#229)
Refactor for consistent --workspace-namespace (#227)
Rename "drs.drs_info" to "drs.info" (#226)
Use source key basename when copying into bucket (#224)
Use basename of source uri, not drs uri (#223)
Introduce an abbreviated drs_info method (#221)
Add fetch_drs_url CLI command (#218)
Update fetch_drs_url to work with new pfb format (#217)
Refactor table fixture generation (#216)
Output error, not stack trace, for CLI errors (#215)
Bump cli-builder (#214)
Describe upgrade process in readme (#213)
Parallelizable tests (#204)
Refactor gs tests into separate file (#203)
Refactor progress tests into separate file (#202)
Refactor vcf tests into separate file (#201)
Refactor tar_gz tests into separate file (#200)
Refactor drs tests into separate file (#199)
Refactor table tests (#198)
Improve vcf cli tests (#196)
Improve vcf info tests (#195)
Introduce test method to grab a partial VCF (#194)
Fix spelling error (#193)
Fix extract_tar_gz bug (#189)
Bump bgzip (#185) Convert workflow durations to hours (#184) Add CLI command to estimate submission cost (#179) Add method to estimate workflow cost (#178) Bump gs-chunked-io (#177) Bump google-cloud-storage (#176) Introduce workflows CLI (#175) Introduce workflow module (#171) Introduce costs module (#170) Refactor CLI test mixin (#174) Move encoded_bytes_stream into tests infra (#173) Refactor test warning suppression mixin (#172)
Remove prepare_merge_workflow_input (#169) Add support for martha_v3 [WA-320][WA-348] (#117) Update tests for exception raised. (#114) Swap subprocess Popen for subprocess run. (#116) Use absolute paths for tnu head testing. (#115) Fix drs batch copy test (#112) Add batch drs copy instructions to readme (#111) Disallow trailing / in drs batch copy bucket dest (#110) Make tnu drs head compatible with python notebooks. (#109) Add a tnu drs head function. Prevent test cruft from littering repo dir (#105) Improve gs url parser with better output to user (#103) Fix bump gs-chunked-io error in tarball extraction (#102) Bump and fix usage for google-crc32c (#104)
Avoid enabling requester pays before copies (#87) Add info and credentials drs commands (#86) Use DRS file name when copying to local dir (#85) Track DRS info with namedtuple (#84) Propagate workspace/namespace args to drs methods (#82) Consistently order workspace and namespace args (#81) Split drs info resolution into separate method (#77) Improve multipart copy (#76)
CLI usage and expressive errors (#75) Improve test concurrency (#74) CLI config correctly falls back to defaults (#73) Config override for tests (#72)
[IA-1919] Adding requester pays and ENV support. Documentation added as well (#69)
- Added requester pays set-up to drs module
- Added ENV variable for local testing to init
- Added some print messages to drs module to let user know what is happening