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README.md

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## Dataset
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### Offical Dataset
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The offical raw dataset is avaiable here(https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/JNGTDF).
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The offical raw GEOM dataset is avaiable here(https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/JNGTDF).
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We also provide the preprocessed datasets in a dropbox folder(https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/JNGTDF).
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We also provide the preprocessed GEOM datasets in a dropbox folder(https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/JNGTDF).
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### Prepare your own dataset from scratch (optional)
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Download the raw dataset and unpack it.
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### Prepare your own GEOM dataset from scratch (optional)
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Download the raw GEOM dataset and unpack it.
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```bash
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tar xvf ~/rdkit_folder.tar.gz -C ~/GEOM
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```
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Preprocess the raw dataset.
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Preprocess the raw GEOM dataset.
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```bash
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python script/process_GEOM_dataset.py --base_path GEOM --dataset_name qm9 --confmin 50 --confmax 500
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## Training
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* `python script/main.py --config ./config/qm9_50k_expmin.yml --train`
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* `python script/main.py --config ./config/drugs_50k_expmin.yml --train`
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* `python script/main.py --config ./config/iso17.yml --train`
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```bash
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python script/train.py --config ./config/qm9_default.yml
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python script/train.py --config ./config/drugs_default.yml
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python script/train.py --config ./config/iso17_default.yml
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```
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## Generation

setup.py

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import setuptools
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if __name__ == "__main__":
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setuptools.setup(
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name="confgf",
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version="0.1.0",
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packages=setuptools.find_packages(include=["confgf"]),
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python_requires=">=3.5",
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)

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