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MikkoVihtakariMikkoVihtakari
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Finish AI bug fixes and update documentation
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‎R/plot_catchcurve.R‎

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@@ -383,7 +383,7 @@ plot_catchcurve <- function(
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} else {
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"L"
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},
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"longevity = ",
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"ongevity = ",
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round(-modf$estimate_a / modf$estimate_b, 1),
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" years (",
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round(-modf$conf.low_a / modf$conf.low_b, 1),
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} else {
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"L"
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},
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"longevity = ",
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"ongevity = ",
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round(-modm$estimate_a / modm$estimate_b, 1),
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" years (",
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round(-modm$conf.low_a / modm$conf.low_b, 1),
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} else {
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"L"
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},
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"longevity = ",
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"ongevity = ",
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round(-modb$estimate_a / modb$estimate_b, 1),
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" years (",
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round(-modb$conf.low_a / modb$conf.low_b, 1),

‎README.md‎

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# ggFishPlots
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**Visualise and calculate life history parameters for fisheries science
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using ggplot2. R package version 0.4.0**
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using ggplot2. R package version 0.4.1**
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<!-- badges: start -->
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#>
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#> $text
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#> [1] "50% maturity at length (L50) based on logit regressions:\n54.763 cm. 95% confidence intervals: 54.661 - 54.886\n Number of specimens: 64265\n\n Confidence intervals estimated using 10 bootstrap replicates."
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#> [1] "50% maturity at length (L50) based on logit regressions:\n54.808 cm. 95% confidence intervals: 54.645 - 54.974\n Number of specimens: 64265\n\n Confidence intervals estimated using 10 bootstrap replicates."
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#>
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#> $params
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#> mean ci.min ci.max sex intercept slope n
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#> 1 54.76276 54.6609 54.8858 both -5.755492 0.1050587 64265
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#> mean ci.min ci.max sex intercept slope n
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#> 1 54.80834 54.64512 54.97355 both -5.755492 0.1050587 64265
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#### Split by sex
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#>
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#> Vihtakari M (2026). _ggFishPlots: Visualise and Calculate Life
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#> History Parameters for Fisheries Science using 'ggplot2'_. R package
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#> version 0.4.0, <https://deepwaterimr.github.io/ggFishPlots/>.
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#> version 0.4.1, <https://deepwaterimr.github.io/ggFishPlots/>.
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#>
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#> A BibTeX entry for LaTeX users is
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#>
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#> @Manual{,
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#> title = {ggFishPlots: Visualise and Calculate Life History Parameters for Fisheries Science using 'ggplot2'},
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#> author = {Mikko Vihtakari},
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#> year = {2026},
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#> note = {R package version 0.4.0},
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#> note = {R package version 0.4.1},
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#> url = {https://deepwaterimr.github.io/ggFishPlots/},
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#> }
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```

‎docs/404.html‎

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‎docs/LICENSE-text.html‎

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‎docs/authors.html‎

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‎docs/authors.md‎

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Vihtakari M (2026). *ggFishPlots: Visualise and Calculate Life History
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Parameters for Fisheries Science using 'ggplot2'*. R package version
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0.4.0, <https://deepwaterimr.github.io/ggFishPlots/>.
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0.4.1, <https://deepwaterimr.github.io/ggFishPlots/>.
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@Manual{,
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title = {ggFishPlots: Visualise and Calculate Life History Parameters for Fisheries Science using 'ggplot2'},
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author = {Mikko Vihtakari},
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year = {2026},
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note = {R package version 0.4.0},
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note = {R package version 0.4.1},
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url = {https://deepwaterimr.github.io/ggFishPlots/},
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}

‎docs/index.html‎

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‎docs/index.md‎

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# ggFishPlots
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**Visualise and calculate life history parameters for fisheries science
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using ggplot2. R package version 0.4.0**
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using ggplot2. R package version 0.4.1**
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## Overview
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``` R
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#>
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#> $text
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#> [1] "50% maturity at length (L50) based on logit regressions:\n54.763 cm. 95% confidence intervals: 54.661 - 54.886\n Number of specimens: 64265\n\n Confidence intervals estimated using 10 bootstrap replicates."
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#> [1] "50% maturity at length (L50) based on logit regressions:\n54.808 cm. 95% confidence intervals: 54.645 - 54.974\n Number of specimens: 64265\n\n Confidence intervals estimated using 10 bootstrap replicates."
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#>
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#> $params
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#> mean ci.min ci.max sex intercept slope n
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#> 1 54.76276 54.6609 54.8858 both -5.755492 0.1050587 64265
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#> mean ci.min ci.max sex intercept slope n
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#> 1 54.80834 54.64512 54.97355 both -5.755492 0.1050587 64265
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```
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#>
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#> Vihtakari M (2026). _ggFishPlots: Visualise and Calculate Life
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#> History Parameters for Fisheries Science using 'ggplot2'_. R package
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#> version 0.4.0, <https://deepwaterimr.github.io/ggFishPlots/>.
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#> version 0.4.1, <https://deepwaterimr.github.io/ggFishPlots/>.
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#>
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#> A BibTeX entry for LaTeX users is
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#>
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#> @Manual{,
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#> title = {ggFishPlots: Visualise and Calculate Life History Parameters for Fisheries Science using 'ggplot2'},
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#> author = {Mikko Vihtakari},
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#> year = {2026},
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#> note = {R package version 0.4.0},
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#> note = {R package version 0.4.1},
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#> url = {https://deepwaterimr.github.io/ggFishPlots/},
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#> }
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```

‎docs/llms.txt‎

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# ggFishPlots
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**Visualise and calculate life history parameters for fisheries science
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using ggplot2. R package version 0.4.0**
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using ggplot2. R package version 0.4.1**
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## Overview
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``` R
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#>
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#> $text
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#> [1] "50% maturity at length (L50) based on logit regressions:\n54.763 cm. 95% confidence intervals: 54.661 - 54.886\n Number of specimens: 64265\n\n Confidence intervals estimated using 10 bootstrap replicates."
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#> [1] "50% maturity at length (L50) based on logit regressions:\n54.808 cm. 95% confidence intervals: 54.645 - 54.974\n Number of specimens: 64265\n\n Confidence intervals estimated using 10 bootstrap replicates."
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#>
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#> $params
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#> mean ci.min ci.max sex intercept slope n
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#> 1 54.76276 54.6609 54.8858 both -5.755492 0.1050587 64265
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#> mean ci.min ci.max sex intercept slope n
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#> 1 54.80834 54.64512 54.97355 both -5.755492 0.1050587 64265
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```
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#>
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#> Vihtakari M (2026). _ggFishPlots: Visualise and Calculate Life
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#> History Parameters for Fisheries Science using 'ggplot2'_. R package
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#> version 0.4.0, <https://deepwaterimr.github.io/ggFishPlots/>.
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#> version 0.4.1, <https://deepwaterimr.github.io/ggFishPlots/>.
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#>
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#> A BibTeX entry for LaTeX users is
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#>
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#> @Manual{,
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#> title = {ggFishPlots: Visualise and Calculate Life History Parameters for Fisheries Science using 'ggplot2'},
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#> author = {Mikko Vihtakari},
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#> year = {2026},
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#> note = {R package version 0.4.0},
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#> note = {R package version 0.4.1},
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#> url = {https://deepwaterimr.github.io/ggFishPlots/},
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#> }
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```

‎docs/pkgdown.yml‎

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pkgdown: 2.2.0
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pkgdown_sha: ~
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articles: {}
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last_built: 2026-02-09T15:46Z
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last_built: 2026-02-10T09:42Z

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