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Thanks for releasing this method for multiome data analysis.
Is there any easy way to use ChromatinHD pred to get predictivity of a given locus with respect to a given gene, for a specific cell type? Right now, I could train individual cell type models, but that would not share information across cell types. I also see that chd.models.pred.interpret.GeneMultiWindow().score() leverages get_prediction_censored() and I could play with passing different cells to cell_ixs.
Please advise,
Kipper
The text was updated successfully, but these errors were encountered:
Thanks for releasing this method for multiome data analysis.
Is there any easy way to use ChromatinHD pred to get predictivity of a given locus with respect to a given gene, for a specific cell type? Right now, I could train individual cell type models, but that would not share information across cell types. I also see that chd.models.pred.interpret.GeneMultiWindow().score() leverages get_prediction_censored() and I could play with passing different cells to
cell_ixs
.Please advise,
Kipper
The text was updated successfully, but these errors were encountered: