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PIPE-94-release210
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long-read-rna-pipeline.wdl

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@@ -12,9 +12,9 @@ import "wdl/tasks/transcriptclean.wdl"
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workflow long_read_rna_pipeline {
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meta {
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author: "Otto Jolanki"
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version: "v2.0.0"
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caper_docker: "encodedcc/long-read-rna-pipeline:v2.0.0"
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caper_singularity: "docker://encodedcc/long-read-rna-pipeline:v2.0.0"
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version: "v2.1.0"
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caper_docker: "encodedcc/long-read-rna-pipeline:v2.1.0"
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caper_singularity: "docker://encodedcc/long-read-rna-pipeline:v2.1.0"
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croo_out_def: "https://storage.googleapis.com/encode-pipeline-output-definition/longreadrna.output_definition.json"
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description: "ENCODE Long-read-rna pipeline, see https://github.com/ENCODE-DCC/long-read-rna-pipeline for details."
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}
@@ -45,8 +45,8 @@ workflow long_read_rna_pipeline {
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# or that contain annotated noncanonical junctions to the clean SAM and Fasta files at the end
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# of the run.
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Boolean canonical_only = true
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String docker = "encodedcc/long-read-rna-pipeline:v2.0.0"
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String singularity = "docker://encodedcc/long-read-rna-pipeline:v2.0.0"
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String docker = "encodedcc/long-read-rna-pipeline:v2.1.0"
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String singularity = "docker://encodedcc/long-read-rna-pipeline:v2.1.0"
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# Resouces
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Resources small_task_resources = {

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