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Dockerfile failed to build #76

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mapostolides opened this issue Jul 13, 2022 · 2 comments
Open

Dockerfile failed to build #76

mapostolides opened this issue Jul 13, 2022 · 2 comments

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@mapostolides
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It seems python 3.7 isn't being downloaded. As a result, the docker image does not build

#8 2.890 E: Couldn't find any package by glob 'python3.7'
#8 2.890 E: Couldn't find any package by regex 'python3.7'
#8 2.890 E: Unable to locate package python3.7-dev
#8 2.890 E: Couldn't find any package by glob 'python3.7-dev'
#8 2.890 E: Couldn't find any package by regex 'python3.7-dev'```
@mapostolides
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I added the following code to install python3.7 :

https://hackthestuff.com/article/how-to-install-python-3-7-in-ubuntu

# Install python3.7
RUN sudo apt update
RUN sudo apt install build-essential zlib1g-dev libncurses5-dev libgdbm-dev libnss3-dev libssl-dev libreadline-dev libffi-dev wget && wget https://www.python.org/ftp/python/3.7.4/Python-3.7.4.tgz && sudo tar xzf Python-3.7.4.tgz && cd Python-3.7.4 && sudo ./configure && sudo make && sudo make install && cd ..

@mapostolides
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I found this prebuilt docker image which I'm going to use instead:

https://quay.io/repository/encode-dcc/long-read-rna-pipeline

docker pull quay.io/encode-dcc/long-read-rna-pipeline:PIP-1234-pytest-wf_ac698810-5e1a-47c6-ac59-f1e98ee5974b

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