diff --git a/_data/sidebars/main.yml b/_data/sidebars/main.yml index eac2f96..7b87c3f 100644 --- a/_data/sidebars/main.yml +++ b/_data/sidebars/main.yml @@ -53,12 +53,10 @@ subitems: url: /fairdom-in-use/plant-is-and-miappe - title: NFDI4Health url: /fairdom-in-use/nfdi4health + - title: PlaSMo, Plant Systems-biology Modelling + url: /fairdom-in-use/plasmo - title: SARChI, Mechanistic modelling of health and epidemiology url: /fairdom-in-use/sarchi - #- title: Plant Systems-biology Modelling - # url: /fairdom-in-use/plantsysbiomod - #- title: Systems Biology Modelling - # url: /fairdom-in-use/sysbiomod - title: deCYPher url: /fairdom-in-use/decypher #- title: FAIRDOM Hubs diff --git a/images/fairdom_in_use/plasmo-logo.png b/images/fairdom_in_use/plasmo-logo.png new file mode 100644 index 0000000..9b2702d Binary files /dev/null and b/images/fairdom_in_use/plasmo-logo.png differ diff --git a/pages/fairdom_in_use/fairdom_projects/plantsysbiomod.md b/pages/fairdom_in_use/fairdom_projects/plantsysbiomod.md deleted file mode 100644 index 2958342..0000000 --- a/pages/fairdom_in_use/fairdom_projects/plantsysbiomod.md +++ /dev/null @@ -1,7 +0,0 @@ ---- -title: Plant Systems-biology Modelling -description: -#type: project #hide this page for now ---- - -## Introduction diff --git a/pages/fairdom_in_use/fairdom_projects/plasmo.md b/pages/fairdom_in_use/fairdom_projects/plasmo.md new file mode 100644 index 0000000..35e5372 --- /dev/null +++ b/pages/fairdom_in_use/fairdom_projects/plasmo.md @@ -0,0 +1,25 @@ +--- +title: PlaSMo, Plant Systems-biology Modelling +description: Case study of migration as a pragmatic exit strategy for research data preservation. +type: project +toc: false +--- + +{% include image.html file="fairdom_in_use/plasmo-logo.png" alt="PlaSMo Logo" max-width='12em' %} + +FAIRDOM provides an opportunity for research project databases to continue to be available long after their original grants have ended. +By migrating a database to [FAIRDOMHub](/fairdom-in-use/fairdomhub), open research, data sharing and data re-use can continue to be offered. + +PlaSMo stands for ‘Plant Systems-biology Modelling’ and the PlaSMo model repository was envisioned by the plant systems biology community in 2005 with the initial funding lasting until 2010. +The team devised an exit strategy to address the sustainability of the PlaSMo repository and preservation of its data. +Data was migrated to the public FAIRDOMHub repository using secured funding. +The migration became feasible following the introduction of the [FAIRDOM-SEEK](/fairdomseek) write API. + +## More information + +Visit the [PlaSMo model repository](https://fairdomhub.org/projects/129) and the [PlaSMo project description](https://fairdomhub.org/documents/36) on FAIRDOMHub. + +For more details about the migration strategy, please see the paper: +Zielinski T, Hay J, Millar AJ. **The grant is dead, long live the data - migration as a pragmatic exit strategy for research data preservation.** Wellcome Open Res. 2019 Sep 23;4:104. +doi: [10.12688/wellcomeopenres.15341.2.](https://doi.org/10.12688%2Fwellcomeopenres.15341.2) +PMID: 31363499; PMCID: PMC6652102. \ No newline at end of file