bibliography.bib

@article{Reynolds:1987:FHS:37402.37406,
 author = {Reynolds, Craig W.},
 title = {Flocks, Herds and Schools: A Distributed Behavioral Model},
 journal = {SIGGRAPH Comput. Graph.},
 issue_date = {July 1987},
 volume = {21},
 number = {4},
 month = aug,
 year = {1987},
 issn = {0097-8930},
 pages = {25--34},
 numpages = {10},
 url = {http://doi.acm.org/10.1145/37402.37406},
 doi = {10.1145/37402.37406},
 acmid = {37406},
 publisher = {ACM},
 address = {New York, NY, USA}
} 

@article{Balanescu:jucs_5_9:communicating_stream_x_machines,
  author =     "Tudor Balanescu and Anthony J. Cowling and Horia Georgescu and Marian Gheorghe and Mike Holcombe and Cristina Vertan",
  title =      "Communicating Stream X-Machines Systems are no more than X-Machines",
  abstract =   "A version of the communicating stream X-machine model is proposed, which gives a precise representation of the operation of transferring data from one X-machine to another. For this model it is shown that systems of communicating X-machines have the same computational power as single stream X-machines. This enable existing methods for deriving test strategies for stream X-machines to be extended to communicating stream X-machines.",
  journal =    "Journal of Universal Computer Science",
  year =       "1999",
  volume =     "5",
  number =     "9",
  pages =      "494--507",
  date =       "1999-09-28",
  month =      "sep"
  }
 
@MISC{Nyland_chapter31,
    author = {Lars Nyland and Mark Harris},
    title = {{Chapter 31 Fast N-Body Simulation with CUDA}},
    booktitle = "Gpu Gems 3",
    year = {2007}
}

@Inbook{Coakley2016,
author="Coakley, Simon
and Richmond, Paul
and Gheorghe, Marian
and Chin, Shawn
and Worth, David
and Holcombe, Mike
and Greenough, Chris",
editor="Ko{\l}odziej, Joanna
and Correia, Lu{\'i}s
and Manuel Molina, Jos{\'e}",
title={{Large-Scale Simulations with FLAME}},
bookTitle="Intelligent Agents in Data-intensive Computing",
year="2016",
publisher="Springer International Publishing",
address="Cham",
pages="123--142"
}


@article{rob_circles,
   author  = {Robert Chisholm, Paul Richmond, Steve Maddock}, 
   title = {A Standardised Benchmark for Assessing the Performance of Fixed Radius Near Neighbours},
   year    = {in press}
   
}

@article{pete,
   author  = {Peter Heywood, Paul Richmond, Steve Maddock, Mark Brackstone, Jordi Casas, David Garcia}, 
   title = {White paper: Accelerating Transport Microsimulation: Demonstrating the Impact of Future Many-Core Simulations},
   year    = {in press},
   publisher = {Department for Transport new technology},
   editor = {Department for Transport new technology}
}

@incollection{RichmondRomano2011,
    author = {Richmond, Paul and Romano, Daniela},
    booktitle = {GPU Computing Gems Emerald Edition},
    chapter = {21},
    citeulike-article-id = {9172728},
    day = {7},
    edition = {1},
    editor = {Hwu, Wen-mei W.},
    isbn = {978-0123849885},
    month = feb,
    pages = {313--324},
    posted-at = {2011-04-19 14:01:58},
    priority = {2},
    publisher = {Morgan Kaufmann},
    series = {Applications of GPU Computing Series},
    title = {{Template-Driven Agent-Based Modeling and Simulation with CUDA}},
    year = {2011}
}

@misc{Thrust,
    author = {Hoberock, Jared and Bell, Nathan},
    citeulike-article-id = {8715631},
    citeulike-linkout-0 = {http://www.meganewtons.com/},
    comment = {Version 1.3.0},
    keywords = {da},
    posted-at = {2011-01-31 13:30:48},
    priority = {0},
    title = {{Thrust: A Parallel Template Library}},
    url = {http://www.meganewtons.com/},
    year = {2010}
}

@article{harris2007parallel,
   title={{Parallel prefix sum (scan) with CUDA}},
   author={Harris, M. and Sengupta, S. and Owens, J.D.},
   journal={GPU Gems},
   volume={3},
   number={39},
   pages={851–876},
   year={2007},
}

@article{33,
    author = {Richmond, Paul and Walker, Dawn and Coakley, Simon and Romano, Daniela},
    day = {01},
    doi = {10.1093/bib/bbp073},
    issn = {1477-4054},
    journal = {Briefings in Bioinformatics},
    keywords = {abm-tools, proposal},
    month = may,
    number = {3},
    pages = {334--347},
    pmid = {20123941},
    posted-at = {2016-04-20 21:48:24},
    priority = {2},
    publisher = {Oxford University Press},
    title = {{High performance cellular level agent-based simulation with FLAME for the GPU}},
    url = {http://dx.doi.org/10.1093/bib/bbp073},
    volume = {11},
    year = {2010}
}

@INPROCEEDINGS{Richmond_agentbased,
    author = {Paul Richmond and Daniela Romano},
    title = {Agent Based GPU, a Real-time 3D Simulation and Interactive Visualisation Framework for Massive Agent Based Modelling on the GPU},
    booktitle = {In Proceedings International Workshop on Super Visualisation (IWSV08) 2008. In},
    year = {2008},
    publisher = {Press}
}
@MISC{Kiran_flame:simulating,
    author = {Mariam Kiran and Lee Shawn Chin and Paul Richmond and Mike Holcombe and David Worth and Chris Greenough},
    title = {FLAME: Simulating Large Populations of Agents on Parallel Hardware Architectures},
    year = {2010}
}

@inproceedings{Richmond:2009:HPA:1558109.1558172,
 author = {Richmond, Paul and Coakley, Simon and Romano, Daniela M.},
 title = {A High Performance Agent Based Modelling Framework on Graphics Card Hardware with CUDA},
 booktitle = {Proceedings of The 8th International Conference on Autonomous Agents and Multiagent Systems - Volume 2},
 series = {AAMAS '09},
 year = {2009},
 isbn = {978-0-9817381-7-8},
 location = {Budapest, Hungary},
 pages = {1125--1126},
 numpages = {2},
 url = {http://dl.acm.org/citation.cfm?id=1558109.1558172},
 acmid = {1558172},
 publisher = {International Foundation for Autonomous Agents and Multiagent Systems},
 address = {Richland, SC},
 keywords = {CUDA, agent based modelling, graphics processing unit, parallel algorithms, performance},
} 

@INPROCEEDINGS{5298704, 
author={P. Richmond and S. Coakley and D. Romano}, 
booktitle={2009 International Workshop on High Performance Computational Systems Biology}, 
title={Cellular Level Agent Based Modelling on the Graphics Processing Unit}, 
year={2009}, 
pages={43-50}, 
keywords={coprocessors;formal specification;parallel processing;C language scripting;Keratinocyte model;PC grids;XML model specification;cellular level agent based modelling;compute unified device architecture;data parallel architecture;graphics processing unit;limited range message communication;nonlinear time simulation;sequential processing environment;template driven agent architecture;Biological system modeling;Biology computing;Computational modeling;Computer architecture;Graphics;Hardware;Parallel processing;Power system modeling;Visualization;XML;Agent Based Modelling;CUDA;GPU Computing;Parallel Computing;Scientific Visualization}, 
doi={10.1109/HiBi.2009.12}, 
month={Oct},}

@inproceedings{KarmakhamRR10,
  author = {Karmakharm, Twin and Richmond, Paul and Romano, Daniela M.},
  booktitle = {TPCG},
  editor = {Collomosse, John P. and Grimstead, Ian J.},
  pages = {67-74},
  publisher = {Eurographics Association},
  timestamp = {2015-12-02T11:42:05.000+0100},
  title = {Agent-based Large Scale Simulation of Pedestrians With Adaptive Realistic Navigation Vector Fields},
  year = 2010
}

@article{FLAIRS1612797,
	author = {Alcione Oliveira and Paul Richmond},
	title = {Feasibility Study of Multi-Agent Simulation at the Cellular Level with FLAME GPU},
	conference = {Florida Artificial Intelligence Research Society Conference},
	year = {2016}
}

@article{doi:10.1177/0037549716673724,
author = {Shailesh Tamrakar and Paul Richmond and Roshan M D’Souza},
title = {PI-FLAME: A parallel immune system simulator using the FLAME graphic processing unit environment},
journal = {SIMULATION},
volume = {93},
number = {1},
pages = {69-84},
year = {2017}
}

@techreport{richmond11b,
    author = {Richmond, Paul},
    citeulike-article-id = {10314729},
    institution = {Department of Computer Science, University of Sheffield},
    posted-at = {2012-02-04 21:31:55},
    priority = {0},
    title = {{FLAME GPU Technical Report and User Guide (CS-11-03)}},
    year = {2011}
}

@inproceedings {LocalChapterEvents:TPCG:TPCG12:041-044,
booktitle = {Theory and Practice of Computer Graphics},
editor = {Hamish Carr and Silvester Czanner},
title = {{Large Scale Pedestrian Multi-Simulation for a Decision Support Tool}},
author = {Karmakharm, Twin and Richmond, Paul},
year = {2012},
publisher = {The Eurographics Association},
ISBN = {978-3-905673-93-7},
DOI = {10.2312/LocalChapterEvents/TPCG/TPCG12/041-044}
}

@ONLINE{netlogo,
author = {Wilensky, U.},
title = {NetLogo Wolf Sheep Predation model.},
year = {1997},
url = {http://ccl.northwestern.edu/netlogo/models/WolfSheepPredation},
publisher = {Center for Connected Learning and Computer-Based Modeling, Northwestern University, Evanston, IL}
}

@techreport{poulter,
author = {Poulter, G L and Greenough, C and Oxford, Harwell},
file = {:media/mozhgan/Mozhgan-Sheff/Dropbox/mozhgan-UoS/Papers (Reading Materials)/2014 - Poulter, Greenough, Oxford - FLAME Tutorial Examples Predation - a simple predator-prey model.pdf:pdf},
keywords = {FLAME,agent-based modelling,tutorial example},
title = {{FLAME Tutorial Examples : Predation - a simple predator-prey model}},
year = {2014}
}