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DESCRIPTION
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Package: FlowSorted.BloodExtended.EPIC
Type: Package
Title: Illumina EPIC data on extended immunomagnetic sorted blood populations
Version: 0.99.0
Date: 2021-03-18
Authors@R: c( person(c("Lucas", "A."), "Salas", role = c("cre", "aut"),
email = "[email protected]"),
person(c("Ze"),"Zhang", role = c("aut"),
email = "[email protected]"),
person(c("Devin", "C."), "Koestler", role = c("ctb")),
person(c("Rondi", "A."), "Butler", role = c("ctb")),
person(c("Helen", "M."), "Hansen", role = c("ctb")),
person(c("Annette"),"Molinaro",role = c("ctb")),
person(c("John", "K."), "Wiencke", role = c("ctb")),
person(c("Karl", "T."), "Kelsey", role = c("ctb")),
person(c("Brock", "C."), "Christensen", role = c("ctb"))
)
Description: Raw data objects to be used for extended blood cell proportion
estimation in minfi and similar packages.
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE167998.
License: file LICENSE
Depends: R (>= 4.0), minfi (>= 1.21.2), FlowSorted.Blood.EPIC,
SummarizedExperiment, genefilter,
quadprog, nlme, S4Vectors, graphics, stats, utils,
IlluminaHumanMethylationEPICanno.ilm10b4.hg19, ExperimentHub
biocViews: ExperimentData, Homo_sapiens_Data, Tissue, MicroarrayData, Genome,
TissueMicroarrayData, MethylationArrayData, ExperimentHub
NeedsCompilation: no
LazyData: yes
Packaged: 2021-03-18 17:00:00 UTC; biocbuild
Suggests: knitr,
rmarkdown, EpiDISH, FlowSorted.CordBloodCombined.450k,
FlowSorted.Blood.450k(>= 1.0.1),
testthat, IlluminaHumanMethylation450kmanifest(>= 0.2.0),
IlluminaHumanMethylation450kanno.ilmn12.hg19(>= 0.2.1),
IlluminaHumanMethylationEPICanno.ilm10b2.hg19
VignetteBuilder: knitr
Encoding: UTF-8
RoxygenNote: 7.1.1
URL: https://github.com/immunomethylomics/FlowSorted.BloodExtended.EPIC
BugReports: https://github.com/immunomethylomics/FlowSorted.BloodExtended.EPIC/issues.