Cleanup Serialbox CMake config + add arolla env (#217)

- Removes some boost settings which are hopefully outdated (as we are not using any compiled boost libraries by default).
- Adds arolla to the testing

Author: havogt

Diff for: cmake/SerialboxConfig.cmake.in

@@ -2,7 +2,7 @@
 ##
 ##                                   S E R I A L B O X
 ##
-## This file is distributed under terms of BSD license. 
+## This file is distributed under terms of BSD license.
 ## See LICENSE.txt for more information.
 ##
 ##===------------------------------------------------------------------------------------------===##
@@ -71,7 +71,7 @@ function( serialbox_alias_targets )
   # serialbox_alias_targets( alias target_shared target_static align )
   #
   #    Creates ALIAS target for given targets. Prefer target_shared if availabe
-  # 
+  #
   set( _alias ${ARGV0} )
   set( _target_shared ${ARGV1} )
   set( _target_static ${ARGV2} )
@@ -107,7 +107,7 @@ endfunction()
 #   Find Serialbox libraries
 #====--------------------------------------------------------------------------------------------===
 
-# Import library targets 
+# Import library targets
 if( NOT @PROJECT_NAME@_TARGETS_EXPORTED )
   include("${CMAKE_CURRENT_LIST_DIR}/SerialboxTargets.cmake")
   set( ${PROJECT_NAME}_TARGETS_EXPORTED TRUE )
@@ -151,57 +151,46 @@ if(NOT(DEFINED SERIALBOX_NO_EXTERNAL_LIBS))
   #
   # Pthreads
   #
-  message( STATUS "Serialbox: find_depencency( Threads )" )
+  message( STATUS "Serialbox: find_dependency(Threads)" )
   find_dependency(Threads)
 
-  #
-  # Boost (Serialbox always uses the shared Boost libraries)
-  #
-  get_property(SHARED_LIB_SUPPORT GLOBAL PROPERTY TARGET_SUPPORTS_SHARED_LIBS)
-  if (SHARED_LIB_SUPPORT)
-      set(Boost_USE_STATIC_LIBS OFF)
-      set(Boost_USE_STATIC_RUNTIME OFF)
-      set(Boost_USE_MULTITHREADED ON)
-  endif()
-  
   set(BOOST_LIBRARYDIR "${SERIALBOX_BOOST_LIBRARY_DIRS}")
   set(BOOST_INCLUDEDIR "${SERIALBOX_BOOST_INCLUDE_DIRS}")
   set(Boost_NO_SYSTEM_PATHS "ON") # Force boost to search locations specified above
 
-  message( STATUS "Serialbox: find_depencency( Boost ${SERIALBOX_BOOST_VERSION} EXACT COMPONENTS ${SERIALBOX_REQUIRED_BOOST_COMPONENTS}}")
-  find_dependency(Boost 
-               ${SERIALBOX_BOOST_VERSION} EXACT COMPONENTS ${SERIALBOX_REQUIRED_BOOST_COMPONENTS})
+  message( STATUS "Serialbox: find_dependency(Boost ${SERIALBOX_BOOST_VERSION} COMPONENTS ${SERIALBOX_REQUIRED_BOOST_COMPONENTS})")
+  find_dependency(Boost
+               ${SERIALBOX_BOOST_VERSION} COMPONENTS ${SERIALBOX_REQUIRED_BOOST_COMPONENTS})
   if(Boost_FOUND)
     list(APPEND SERIALBOX_INCLUDE_DIRS ${Boost_INCLUDE_DIRS})
   else()
-  
     # Give some diagnostic infos
     set(WARN_STR "Serialbox: Boost (${SERIALBOX_BOOST_VERSION}) NOT found!")
-  
+
     if(DEFINED Boost_LIB_VERSION)
       string(REPLACE "_" "." FOUND_BOOST_VERSION ${Boost_LIB_VERSION})
-      list(APPEND WARN_STR " (Found Boost ${FOUND_BOOST_VERSION})")  
+      list(APPEND WARN_STR " (Found Boost ${FOUND_BOOST_VERSION})")
     endif()
-    
+
     list(APPEND WARN_STR "\nRequired components:")
-    
+
     foreach(component ${SERIALBOX_REQUIRED_BOOST_COMPONENTS})
       list(APPEND WARN_STR "\n - ${component}")
     endforeach()
-    
+
     message(WARNING ${WARN_STR} "\n")
   endif()
-  
+
   #
   # OpenSSL
   #
   if(SERIALBOX_HAS_OPENSSL)
     find_package(OpenSSL QUIET)
-    if(NOT OpenSSL_FOUND)  
+    if(NOT OpenSSL_FOUND)
       message(WARNING "Serialbox depends on the OpenSSL libraries")
     endif()
   endif()
-  
+
   #
   # NetCDF
   #
@@ -210,7 +199,7 @@ if(NOT(DEFINED SERIALBOX_NO_EXTERNAL_LIBS))
     if(NETCDF_ROOT_ENV)
       set(NETCDF_ROOT ${NETCDF_ROOT_ENV} CACHE PATH "NetCDF install path.")
     endif()
-    
+
     if(NOT(DEFINED NETCDF_ROOT))
       find_path(NETCDF_ROOT NAMES include/netcdf.h)
     else()
@@ -222,7 +211,7 @@ if(NOT(DEFINED SERIALBOX_NO_EXTERNAL_LIBS))
     if(NETCDF_LIBRARIES)
       mark_as_advanced(NETCDF_LIBRARIES)
     else()
-      message(WARNING 
+      message(WARNING
               "Serialbox depends on the NetCDF-4 libraries. (Try setting NETCDF_ROOT in the env)")
     endif()
   endif()
@@ -233,4 +222,3 @@ endif()
 #====--------------------------------------------------------------------------------------------===
 find_file(SERIALBOX_PPSER pp_ser.py @PACKAGE_PYTHON_INSTALL_DIR@/pp_ser)
 include(@PACKAGE_CMAKE_INSTALL_DIR@/SerialboxTooling.cmake)
-

Diff for: cmake/modules/Fortran/Cray.cmake

@@ -2,14 +2,18 @@
 ##
 ##                                   S E R I A L B O X
 ##
-## This file is distributed under terms of BSD license. 
+## This file is distributed under terms of BSD license.
 ## See LICENSE.txt for more information.
 ##
 ##===------------------------------------------------------------------------------------------===##
 
 # General Flags (add to default)
-set(CMAKE_Fortran_FLAGS 
-    "${CMAKE_Fortran_FLAGS} -ffree -N255 -ec -eC -eI -eF -hnosecond_underscore -hflex_mp=conservative -Ofp1 -hadd_paren -ra")
+set(CMAKE_Fortran_FLAGS
+    "${CMAKE_Fortran_FLAGS} -ffree -N255 -ec -eC -eI -eF -hflex_mp=conservative -Ofp1 -hadd_paren -ra")
+
+if(CMAKE_Fortran_COMPILER_VERSION VERSION_LESS 9.0.0)
+    set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -hnosecond_underscore ")
+endif()
 
 # OpenACC flags
 set(OpenACC_FLAGS "-hnoacc")

Diff for: tools/cscs-scripts/build.sh

@@ -70,6 +70,8 @@ elif [ "$(hostname | grep kesch)" != "" ] ; then
     MYHOST="kesch"
 elif [ "$(hostname | grep daint)" != "" ] ; then
     MYHOST="daint"
+elif [ "$(hostname | grep arolla)" != "" ] ; then
+    MYHOST="arolla"
 elif [ "$(hostname | grep tave)" != "" ] ; then
     MYHOST="tave"
 else
@@ -193,7 +195,7 @@ fi
 
 #NetCDF
 SERIALBOX_USE_NETCDF=OFF
-if [ "${FC_COMPILER}" = "gfortran" ]; then
+if [ "${FC_COMPILER}" = "gfortran" ] && [ "$MYHOST" != "arolla" ]; then
     SERIALBOX_USE_NETCDF=ON
 fi
 

Diff for: tools/cscs-scripts/env_arolla.sh

@@ -0,0 +1,99 @@
+#!/bin/bash
+##===-----------------------------------------------------------*- bash -*-===##
+##
+##                           S E R I A L B O X
+##
+## This file is distributed under terms of BSD license.
+## See LICENSE.txt for more information.
+##
+##===----------------------------------------------------------------------===##
+
+## Print help statement and exit.
+print_help()
+{
+    printf "Usage: $0 [options]\n\n"
+    printf "Options:\n"
+
+    # --fc-compiler
+    printf "  %-35s %s\n" \
+           "-f, --fc-compiler FORTRAN_COMPILER" \
+           "Fortran compiler to use (set to "
+    printf "  %-35s %s\n" "" "environment variable FC)."
+
+    # --help
+    printf "  %-35s %s\n" "-h, --help" "Print this help statement."
+    printf "\n"
+    exit 0
+}
+
+## Convert to lower case and remove all whitespaces
+to_lower_and_trim()
+{
+    if [ $# -ne 1 ]; then
+        echo "$0: internal error." ; exit 1
+    fi
+
+    local to_lower=$(echo "$1" | tr '[:upper:]' '[:lower:]')
+    local trim_whitespaces=${to_lower// /}
+    echo "${trim_whitespaces}"
+}
+
+#------------------------------ Parse options ----------------------------------
+ENV_ARGS=$(getopt -o f:h:: -l fc-compiler,help:: -n 'env_kesch' -- "$@");
+
+if [ $? -ne 0 ]; then
+  exit 1
+fi
+
+eval set -- "$ENV_ARGS"
+
+while true; do
+    case "$1" in
+        -h|--h*) print_help; exit 0;;
+        -f|--fc-compiler) ARG_FC_COMPILER=$(to_lower_and_trim $2); shift 2;;
+        --) shift; break ;;
+        *) echo "$0: internal error." ; exit 1 ;;
+    esac
+done
+
+# Fortran Compiler
+if [ -z ${ARG_FC_COMPILER+x} ]; then
+  echo "$0: error: fortran compiler is not set"
+  exit 1
+else
+  FC_COMPILER=${ARG_FC_COMPILER}
+fi
+
+#------------------------------ Set environment --------------------------------
+
+module load craype-x86-skylake
+module load craype-network-infiniband
+module load slurm
+module load cmake/3.14.3
+
+if [ "$FC_COMPILER" = "pgfortran" ]; then
+    module load PrgEnv-pgi/19.4
+    module load gcc
+elif [ "$FC_COMPILER" = "ftn" ]; then
+    module load PrgEnv-cray
+    module load gcc
+elif [ "$FC_COMPILER" = "ifort" ]; then
+    echo "not defined"
+    exit 1
+else
+    module load PrgEnv-gnu
+fi
+
+#module load netcdf-c++/4.3.0-gmvolf-18.12
+#module load hdf5/1.10.5-gmvolf-18.12
+#export NETCDF_ROOT=${EBROOTNETCDF}
+
+export CXX=$(which g++)
+export CC=$(which gcc)
+export FC=$(which $FC_COMPILER)
+
+export Boost_NO_SYSTEM_PATHS=true
+export Boost_NO_BOOST_CMAKE=true
+
+export BOOST_ROOT=/project/c14/install/daint/boost/boost_1_67_0
+