log minor

Author: aleksejs-fomins

mesostat/metric/dim3d/partialcorr.py

@@ -37,7 +37,11 @@ def partial_corr(x, y, covar, eta=1.0E-6):
     if np.isnan(rez):
         raise ValueError("Sth Went wrong")
 
-    return np.clip(rez, eta, None)  # Crop very small values
+    # Crop very small values, but allow for negative partial correlation
+    if np.abs(rez) > eta:
+        return rez
+    else:
+        return eta
 
 
 def partial_corr_3D(dataRPS: np.array, settings: dict):

mesostat/utils/decorators.py

@@ -57,7 +57,7 @@ def inner(*args, **kwargs):
 
         orig_stdout = sys.stdout
         fname = 'log_' + str(procId) + '.txt'
-        with open(fname, 'w+') as f:
+        with open(fname, 'a') as f:
             #print("Redirecting STDOUT to", fname, flush=True)
             sys.stdout = f
             rez = func(*args, **kwargs)
@@ -80,4 +80,4 @@ def inner(*args, **kwargs):
         print(time_now_as_str(), "proc:", procId, "mem:", mem_now_as_str(), "arg:", args[0], "finished")
         return rez
 
-    return inner
+    return inner