Merge pull request #200 from dominikl/prod122_stats

Update NGFF converted studies

Author: sbesson

_data/releases.tsv

@@ -75,3 +75,4 @@ Date	Data release	Code version	Sets	Wells	Experiments	Images	Planes	Size (TB)	Fi
 2023-10-09	prod119	0.11.9	21617	1978974		14012392	118390729	384.893134429384	38.160129	468.92	125
 2024-03-05	prod120	0.12.0	21628	1978974		14017840	118660875	385.67365086156303	38.176475	471.31	127
 2024-05-20	prod121	0.12.1	21660	1978974		14018967	118814421	399.030210159843	38.179857	471.45	128
+2024-07-03	prod122	0.12.2	21660	1978974		14018967	118814421	409.427319995011	200.818337	482.32	128

_data/studies.tsv

@@ -2,7 +2,7 @@ Study	Container	Introduced	Internal ID	Sets	Wells	Experiments (wells for screens
 idr0001-graml-sysgro	screenA	demo1	3	192	18432	18432	3005	1143	109728	3511296	10.05569923	10055699234784	219606	45.78972904	1376 x 1040 x 16 x 2 x 1	cell
 idr0002-heriche-condensation	screenA	demo2	102	12	1152	1152	102	12	1152	773760	2.095992298	2095992297526	762482	2.74890725	1344 x 1024 x 1 x 2 x 330	cell
 idr0003-breker-plasticity	screenA	demo1	51	85	32640	32640	6234	85	97920	293760	0.2030157197	203015719716	391869	0.5180703748	672 x 512 x 1 x 3 x 1	cell
-idr0004-thorpe-rad52	screenA	demo1	202	47	4512	4512	4195	47	3765	75308	0.1733497571	173349757055	7628	22.72545321	672 x 510 x 10 x 2 x 1	cell
+idr0004-thorpe-rad52	screenA	demo1	202	47	4512	4512	4195	47	3765	75308	0.023598144197	23598144197	324281	0.0727706655554905	672 x 510 x 10 x 2 x 1	cell
 idr0005-toret-adhesion	screenA	demo1	597	141	13536	13536	12976	141	40608	40608	0.1181280883	118128088276	81501	1.449406612	1392 x 1040 x 1 x 1 x 1	cell
 idr0005-toret-adhesion	screenB	demo1	751	18	1728	1728	803	18	5184	5184	0.01507941539	15079415394	10406	1.449107764	1392 x 1040 x 1 x 1 x 1	cell
 idr0006-fong-nuclearbodies	screenA	demo1	253	169	16224	16224	12743	169	240848	481696	1.396310131	1396310130588	720292	1.938533443	1392 x 1040 x 1 x 2 x 1	cell
@@ -11,15 +11,15 @@ idr0008-rohn-actinome	screenA	demo1	154	58	22272	22272	12274	58	44538	138990	0.0
 idr0008-rohn-actinome	screenB	demo1	206	11	4224	4224	552	11	11406	38760	0.02825362271	28253622710	50154	0.5633373751	696 x 520 x 1 x 3 x 1	cell
 idr0009-simpson-secretion	screenA	demo2	251	964	370176	370176	17953	964	370176	1112064	3.037927562	3037927562310	1477555	2.056050409	1344 x 1024 x 1 x 3 x 1	cell
 idr0009-simpson-secretion	screenB	demo2	803	70	26880	26880	1392	70	26880	80640	0.2120103129	212010312890	104081	2.036974211	1344 x 1024 x 1 x 3 x 1	cell
-idr0010-doil-dnadamage	screenA	demo2	1351	148	56832	56832	18675	148	56832	113664	0.08306083391	83060833910	55986	1.483600077	696 x 520 x  1 x 2 x 1	cell
-idr0011-ledesmafernandez-dad4	screenA	demo32	1501	129	6192	6192	4746	129	6175	389025	0.2719424452	271942445165	12609	21.56732851	672 x 512 x 21 x 3 x 1	cell
-idr0011-ledesmafernandez-dad4	screenB	demo32	1551	40	1920	1920	475	40	1806	113628	0.0794297595	79429759498	3693	21.50819374	672 x 512 x 21 x 3 x 1	cell
-idr0011-ledesmafernandez-dad4	screenC	demo32	1601	4	192	192	101	4	86	5367	0.003752055127	3752055127	181	20.72958634	672 x 512 x 21 x 3 x 1	cell
-idr0012-fuchs-cellmorph	screenA	demo31	1202	68	26112	26112	16701	68	45692	137076	0.3800784721	380078472112	182905	2.07801029	1344 x 1024 x 1.13 x 2.9 x 1	cell
-idr0013-neumann-mitocheck	screenA	demo1	1101	510	195840	195840	18393	510	191368	17851318	13.90126882	13901268824248	383746	36.22518235	1344 x 1024 x 1 x 1 x 93	cell
-idr0013-neumann-mitocheck	screenB	demo1	1302	28	10752	10752	1127	28	9627	904248	0.6372969742	637296974242	19311	33.00175932	1344 x 1024 x 1 x 1 x 94	cell
-idr0015-colin-taraoceans	screenA	demo1	1201	84	33264	84	84	84	32776	3319125	2.494360073	2494360072781	3351835	0.7441774648	2048 x 2048 x 20 x 5 x 1	cell
-idr0016-wawer-bioactivecompoundprofiling	screenA	demo31	1251	413	158592	158592	29542	413	934332	4671660	3.189381488	3189381488112	5203933	0.6128790452	696 x 520 x 1 x 5 x 1	cell
+idr0010-doil-dnadamage	screenA	demo2	1351	148	56832	56832	18675	148	56832	113664	0.099947310902	99947310902	736471	0.135711129022052	696 x 520 x  1 x 2 x 1	cell
+idr0011-ledesmafernandez-dad4	screenA	demo32	1501	129	6192	6192	4746	129	6175	389025	0.34802577145	348025771450	1211646	0.287233871485566	672 x 512 x 21 x 3 x 1	cell
+idr0011-ledesmafernandez-dad4	screenB	demo32	1551	40	1920	1920	475	40	1806	113628	0.101014278546	101014278546	352785	0.28633382526468	672 x 512 x 21 x 3 x 1	cell
+idr0011-ledesmafernandez-dad4	screenC	demo32	1601	4	192	192	101	4	86	5367	0.004803192302	4803192302	16747	0.286809118170419	672 x 512 x 21 x 3 x 1	cell
+idr0012-fuchs-cellmorph	screenA	demo31	1202	68	26112	26112	16701	68	45692	137076	0.491171661385	491171661385	1006656	0.487924038981539	1344 x 1024 x 1.13 x 2.9 x 1	cell
+idr0013-neumann-mitocheck	screenA	demo1	1101	510	195840	195840	18393	510	191368	17851318	18.979222112102	18979222112102	90833209	0.208945850543517	1344 x 1024 x 1 x 1 x 93	cell
+idr0013-neumann-mitocheck	screenB	demo1	1302	28	10752	10752	1127	28	9627	904248	0.975198873857	975198873857	4598798	0.212055166123191	1344 x 1024 x 1 x 1 x 94	cell
+idr0015-colin-taraoceans	screenA	demo1	1201	84	33264	84	84	84	32776	3319125	6.606517967503	6606517967503	23498354	0.281148116480967	2048 x 2048 x 20 x 5 x 1	cell
+idr0016-wawer-bioactivecompoundprofiling	screenA	demo31	1251	413	158592	158592	29542	413	934332	4671660	2.71654297217	2716542972170	24611441	0.110377241713315	696 x 520 x 1 x 5 x 1	cell
 idr0017-breinig-drugscreen	screenA	demo1	1151	96	36864	36864	1281	96	147456	294912	2.475378781	2475378780549	439490	5.632389316	2048 x 2048 x 1 x 2 x 1	cell
 idr0018-neff-histopathology	experimentA	demo2	101	248	0	248	9	0	899	2237	0.2661719315	266171931504	1778	149.7029986	40673 x 23249 x 1 x 2 x 1	tissue
 idr0019-sero-nfkappab	screenA	demo32	1203	7	2156	2156	198	7	25872	77616	0.02699291406	26992914057	51773	0.5213704838	668 x 501 x 1 x 3 x 1	cell
@@ -28,18 +28,18 @@ idr0021-lawo-pericentriolarmaterial	experimentA	demo2	51	10	0	414	9	10	414	935	0
 idr0022-koedoot-cellmigration	screenA	prod70	2151	524	50304	50304		524	1810944	1810944	1.256945644	1256945643520	209901	5.988278491	672 x 512 x 1 x 1 x 1	cell
 idr0022-koedoot-cellmigration	screenB	prod70	2152	152	14592	14592		152	525312	525312	0.3634538988	363453898752	16540	21.97423813	672 x 512 x 1 x 1 x 1	cell
 idr0023-szymborska-nuclearpore	experimentA	demo2	52	55	0	359	8	55	524	106085	0.000515497812	515497812	1573	0.3277163458	1250 x 1250 x 202 x 1 x 1	cell
-idr0025-stadler-proteinatlas	screenA	demo34	1851	3	288	288	72	3	1152	3456	0.01454160245	14541602452	4615	3.15094311	2048 x 2048 x 1 x 3 x 1	cell
-idr0026-weigelin-immunotherapy	experimentA	demo35	301	18	0	18	18	18	227	959148	0.4824955621	482495562055	24739	19.50343838	501.0 x 497.9 x 103.3 x 3.4 x 56.5	tissue
+idr0025-stadler-proteinatlas	screenA	demo34	1851	3	288	288	72	3	1152	3456	0.003546630216	3546630216	31723	0.111799962676922	2048 x 2048 x 1 x 3 x 1	cell
+idr0026-weigelin-immunotherapy	experimentA	demo35	301	18	0	18	18	18	227	959148	0.303649894157	303649894157	1072214	0.283198964159207	501.0 x 497.9 x 103.3 x 3.4 x 56.5	tissue
 idr0027-dickerson-chromatin	experimentA	demo3	151	8	0	112	8	8	229	697100	0.03053021592	30530215918	802	38.0676009	122 x 122 x 17 x 2 x 87	cell
 idr0028-pascualvargas-rhogtpases	screenA	demo3	1651	4	960	960	140		26880	107520	0.03053746629	30537466292	53778	0.5678431011	667 x 501 x 1 x 4 x 1	cell
 idr0028-pascualvargas-rhogtpases	screenB	demo3	1652	4	1523	1523	170	4	42644	170576	0.0491721367	49172136697	74582	0.6593030047	667 x 500 x 1 x 4 x 1	cell
 idr0028-pascualvargas-rhogtpases	screenC	demo3	1653	4	1525	1525	143	4	42700	170800	0.04748796707	47487967069	85418	0.5559480094	667 x 500 x 1 x 4 x 1	cell
 idr0030-sero-yap	screenA	demo34	1801	10	3080	3080	949	10	92400	369600	0.1408710078	140871007844	184840	0.7621240416	647.2 x 498.0 x 1 x 4 x 1	cell
 idr0032-yang-meristem	experimentA	demo32	201	115	0	115	115	0	458	1374	0.002968570159	2968570159	1375	2.158960116	1063 x 1063 x 1 x 3 x 1	tissue
-idr0033-rohban-pathways	screenA	demo34	1751	12	4608	4608	189	12	41472	207360	0.4866593388	486659338763	248856	1.955586117	1080 x 1080 x 1 x 5 x 1	cell
+idr0033-rohban-pathways	screenA	demo34	1751	12	4608	4608	189	12	41472	207360	0.647970429679	647970429679	1709829	0.378967972632936	1080 x 1080 x 1 x 5 x 1	cell
 idr0034-kilpinen-hipsci	screenA	prod37	1901	29	1536	684	86	29	6156	24624	0.1106760836	110676083636	68559	1.614318815	1360 x 1024 x 1 x 4 x 1	cell
-idr0035-caie-drugresponse	screenA	prod45	2001	55	5280	5280		55	13200	39600	0.1042671392	104267139150	52911	1.970613656	1280 x 1024 x 1 x 3 x 1	cell
-idr0036-gustafsdottir-cellpainting	screenA	prod43	1952	20	7680	7680		20	69120	345600	0.2534836035	253483603463	459902	0.5511687348	696 x 520 x 1 x 5 x 1	cell
+idr0035-caie-drugresponse	screenA	prod45	2001	55	5280	5280		55	13200	39600	0.112523139532	112523139532	284461	0.39556613923174	1280 x 1024 x 1 x 3 x 1	cell
+idr0036-gustafsdottir-cellpainting	screenA	prod43	1952	20	7680	7680		20	69120	345600	0.202758614962	202758614962	1812861	0.111844545699863	696 x 520 x 1 x 5 x 1	cell
 idr0037-vigilante-hipsci	screenA	prod64	2051	69	3303	3303		69	29727	120312	0.2475409543	247540954296	159496	1.552019827	1360 x 1024 x 1 x 4 x 1	cell
 idr0038-held-kidneylightsheet	experimentA	prod44	351	7	0	18	15	0	74	132590	0.818378455	818378455049	111	7372.778874	1833.2 x 1777.8 x 548.3 x 3.4 x 1	tissue
 idr0038-held-kidneylightsheet	experimentB	prod44	352	4	0	4	4	0	10	9275	0.06840395765	68403957651	19	3600.208297	1920 x 1920 x 411.7 x 2.2 x 1	tissue
@@ -55,15 +55,15 @@ idr0050-springer-cytoskeletalsystems	experimentA	prod63	505	32	0	32		0	4816	3132
 idr0052-walther-condensinmap	experimentA	prod66	752	44	0	44		0	282	699360	0.1400874804	140087480413	17767	7.884700873	256 x 256 x 31 x 2 x 40	cell
 idr0052-walther-condensinmap	experimentB	prod66	753	13	0	13		0	68	65988	0.003284121226	3284121226	205	16.02010354	128 x 128 x 9 x 3 x 35.9	cell
 idr0052-walther-condensinmap	experimentC	prod66	754	6	0	6		0	171	8720	0.000531108007	531108007	856	0.6204532792	169.3 x 177.0 x  25.5 x 2 x 1	cell
-idr0051-fulton-tailbudlightsheet	experimentA	prod60	552	3	0	3		0	5	243029	0.01510907904	15109079040	627	24.09741474	429 x 463 x 357 x 1 x 122	tissue
+idr0051-fulton-tailbudlightsheet	experimentA	prod60	552	3	0	3		0	5	243029	0.019364970628	19364970628	572217	0.0338420050924737	429 x 463 x 357 x 1 x 122	tissue
 idr0053-faas-virtualnanoscopy	experimentA	prod62	504	4	0	4		0	5	11	0.532245095	532245095014	17	31308.535	225078.4 x 113347.2 x 1 x 2.2 x 1	tissue
-idr0054-segura-tonsilhyperion	experimentA	prod65	701	1	0	1		0	3	81	0.000200247605	200247605	91	2.200523132	2500 x 2500 x 1 x 27 x 1	tissue
+idr0054-segura-tonsilhyperion	experimentA	prod65	701	1	0	1		0	3	81	0.000414581301	414581301	1336	0.31031534505988	2500 x 2500 x 1 x 27 x 1	tissue
 idr0056-stojic-lncrnas	screenA	prod80	2301	10	3080			8	92400	369600	0.246390360251	246390360251	166953	1.4758067255515026	660 x 501 x 1 x 4 x 1	cell
 idr0056-stojic-lncrnas	screenB	prod80	2302	10	3837			9	115110	460440	0.302740581841	302740581841	219100	1.3817461517161114	660 x 494 x 1 x 4 x 1	cell
 idr0056-stojic-lncrnas	screenC	prod80	2303	2	480			0	13440	53760	0.036026463637	36026463637	13929	2.586435755402398	667 x 499 x 1 x 4 x 1	cell
 idr0061-wolf-spindlepositioning	screenA	prod68	2101	31	2976	2976		31	5952	1071360	8.444	9066895195262	1085415	7.96641383919385	2048 x 2048 x 1 x 1 x 180	cell
 idr0062-blin-nuclearsegmentation	experimentA	prod67	801	5	0	5		0	22	8222	0.02161802412	21618024122	94	229.97898	618.0 x 548.0 x 168.0 x 3 x 1	cell
-idr0064-goglia-erkdynamics	screenA	prod81	2351	9	1071			0	450	108900	0.057141681707	57141681707	919	62.17810849510337	512 x 512 x 1 x 2 x 121	cell
+idr0064-goglia-erkdynamics	screenA	prod81	2351	9	1071			0	450	108900	0.070482826998	70482826998	220600	0.319505108785132	512 x 512 x 1 x 2 x 121	cell
 idr0065-camsund-crispri	experimentA	prod72	901	13	0			0	1170	1125540	3.100002577126	3100002577126	846486	3.662201828649263	2048 x 879 x 1 x 2 x 481	cell
 idr0065-camsund-crispri	experimentB	prod72	902	143	0			0	12870	64350	0.232502905507	232502905507	77520	2.999263486932404	2048 x 879 x 1 x 5 x 1	cell
 idr0066-voigt-mesospim	experimentA	prod70	851	2	0	2		0	6	8222	0.03252215387	32522153872	18	1806.786326	2048 x 1668 x 646 x 1 x 1	tissue
@@ -120,7 +120,7 @@ idr0097-reicher-proteintag	experimentC	prod93	1603	3	0			0	33	81	0.054190487738
 idr0097-reicher-proteintag	screenA	prod93	2801	8	720			8	3600	3600	0.005884477188	5884477188	7273	0.8090852726522755	1080 x 1080 x 1 x 1 x 1	cell
 idr0098-huang-octmos	experimentA	prod93	1605	8	0			0	6800	3173956	2.822721392054	2822721392054	20401	138.361913242194	616 x 343 x 467 x 1 x 1	tissue
 idr0098-huang-octmos	experimentB	prod93	1606	3	0			0	18	42	0.012762546217	12762546217	31	411.6950392580645	78373 x 27356 x 1 x 2 x 1	tissue
-idr0090-ashdown-malaria	screenA	prod94	2851	22	1493			0	17408	2698240	22.604516135004	22604516135004	34861	648.4184657641491	2048 x 2044 x 31 x 5 x 1	cell
+idr0090-ashdown-malaria	screenA	prod94	2851	22	1493			0	17408	2698240	23.922691530824	23922691530824	19792199	1.20869295679697	2048 x 2044 x 31 x 5 x 1	cell
 idr0099-jain-beetlelightsheet	experimentA	prod94	1651	5	0			0	5	2292429	9.02672706133	9026727061330	2234	4040.611934346464	1057 x 1797 x 1045 x 1 x 444	tissue
 idr0093-mueller-perturbation	screenA	prod95	2751	83	31872			83	233505	934020	10.329513984	10329513984000	1182758	8.73	2560 x 2160 x 1 x 4 x 1	cell
 idr0106-kubota-lunglightsheet	experimentA	prod95	1701	1	0			0	1	1203	0.044341448828	44341448828	1207	36.73690872245236	4992 x 4255 x 401 x 3 x 1	tissue