tools_path.yaml

## BUILD SINGULARITY IMAGES PATH
SINGULARITY:
    REPORT : '/path/to/Containers/Singularity.report.sif'
    TOOLS : '/path/to/Containers/Singularity.culebront_tools.sif'

ENVMODULE:
    R : "bioinfo/R/4.0.2"
    QUAST : "bioinfo/quast/5.0.2"
    MAUVE : "bioinfo/mauve/2.4.0"
    SHASTA : "bioinfo/shasta/0.1.0"
    ASSEMBLYTICS : "bioinfo/Assemblytics/1.0"
    MEDAKA : "bioinfo/medaka-gpu/0.10.0"
    KAT : "bioinfo/kat/2.4.1"
    BLOBTOOLS : "bioinfo/blobtools/1.0.1"
    BUSCO : "bioinfo/BUSCO/3.0.2"
    PILON : "bioinfo/pilon/1.23"
    FLYE : "bioinfo/Flye/2.4.1"
    CANU : "bioinfo/canu/1.8"
    MINIPOLISH : "bioinfo/Minipolish/0.1.2"
    RAVEN : "bioinfo/raven-assembler/0.0.1"
    SMARTDENOVO : "bioinfo/SMARTdenovo/1.0"
    CIRCLATOR : "bioinfo/circlator/1.5.5"
    DIAMOND : "bioinfo/diamond/0.9.30"
    MUMMER : "bioinfo/MUMmer/4.0.0beta2"
    MINIASM : "bioinfo/miniasm/0.3"
    MINIMAP2 : "bioinfo/minimap2/2.17"
    SAMTOOLS : "bioinfo/samtools/1.10"
    RACON : "bioinfo/racon-gpu/1.4.10"
    NANOPOLISH : "bioinfo/nanopolish/0.11.1"
    SEQTK : "bioinfo/seqtk/1.3-r106"
    BWA: "bioinfo/bwa/0.7.17"