diff --git a/docs/src/examples/07-loopless-models.jl b/docs/src/examples/07-loopless-models.jl index 1dd71143b..84eedcde5 100644 --- a/docs/src/examples/07-loopless-models.jl +++ b/docs/src/examples/07-loopless-models.jl @@ -43,4 +43,3 @@ sol.pseudo_gibbs_free_energy_reaction 0.8739215069684292, atol = TEST_TOLERANCE, ) #src - diff --git a/docs/src/examples/08-community-models.jl b/docs/src/examples/08-community-models.jl index 88e8016cb..22a23eb9a 100644 --- a/docs/src/examples/08-community-models.jl +++ b/docs/src/examples/08-community-models.jl @@ -26,9 +26,9 @@ model = load_model("e_coli_core.json") # are then linked to an environmental exchange. For more theoretical details, # see "Gottstein, et al, 2016, Constraint-based stoichiometric modelling from # single organisms to microbial communities, Journal of the Royal Society -# Interface". +# Interface". -# ## Building a community of two *E. coli*s +# ## Building a community of two *E. coli*s # Here we will construct a simple community of two interacting microbes. To do # this, we need to import the models. We import the models are ConstraintTrees, @@ -100,7 +100,7 @@ sol = optimized_constraints( @test isapprox(sol.:objective, 0.66686196344, atol = TEST_TOLERANCE) #src # At the moment the members cannot really exchange any metabolites. We can -# change this by changing their individual exchange bounds. +# change this by changing their individual exchange bounds. mets = [:EX_akg_e, :EX_succ_e, :EX_pyr_e, :EX_acald_e, :EX_fum_e, :EX_mal__L_e] for met in mets m.bug1.fluxes[met].bound = (-1000.0, 1000.0) diff --git a/src/analysis/loopless_flux_balance.jl b/src/analysis/loopless_flux_balance.jl index 8b1378917..e69de29bb 100644 --- a/src/analysis/loopless_flux_balance.jl +++ b/src/analysis/loopless_flux_balance.jl @@ -1 +0,0 @@ -