CPC2: svm-scale and svm-predict Permission denied

[menegidio-lab]

I installed ezLncPred through Conda pip. All other applications work and I can run CPC2 standalone in the same env. However, when I try to run it from ezLncPred, I see the error below:

Now CPC2 is ready to run ...

[INFO] read file 'fasta/GHCM01000000.fasta'
[INFO] Predicting coding potential, please wait ...
sim path is
/home/menegidio/miniconda3/envs/ezLncPred/lib/python3.6/site-packages/ezLncPred/models/CPC2/bin/../../tools/libsvm/svm-scale /home/menegidio/miniconda3/envs/ezLncPred/lib/python3.6/site-packages/ezLncPred/models/CPC2/bin/../../tools/libsvm/svm-predict
[ERROR] No excutable svm-scale on CPC2 path!
[ERROR] No excutable svm-predict on CPC2 path!
sh: 1: /home/menegidio/miniconda3/envs/ezLncPred/lib/python3.6/site-packages/ezLncPred/models/CPC2/bin/../../tools/libsvm/svm-scale: Permission denied
[ERROR] Prediction error!

File permission is normal and even changing to 755 I keep seeing error.

[menegidio-lab]

Resolution:

chmod -v u+x svm-train svm-predict svm-scale
chmod +x svm-train svm-predict svm-scale