updating docs

Author: carsen-stringer

docs/api.rst

@@ -9,6 +9,8 @@ Cellpose class
 .. autoclass:: cellpose.models.Cellpose
    :members:
 
+.. _cpmclass:
+
 CellposeModel
 ~~~~~~~~~~~~~~~~~~
 

docs/benchmark.rst

@@ -2,9 +2,8 @@ Timing + memory usage
 ------------------------------------
 
 The algorithm runtime and memory usage increases with the data size. The runtimes 
-shown below are for a single image run for the first time on an A100 with a batch_size of 32 
- - this timing includes warm-up of GPU, thus runtimes 
-will be faster for subsequent images. It will also be faster if you run many images of the same size 
+shown below are for a single image run once on an A100 with a batch_size of 32.
+This timing includes warm-up of GPU, thus runtimes will be faster for subsequent images. It will also be faster if you run many images of the same size 
 input as an array into Cellpose with a large batch_size. The runtimes will also be 
 slightly faster if you have fewer cells/cell pixels.
 
@@ -14,12 +13,12 @@ slightly faster if you have fewer cells/cell pixels.
 Table for 2D:
 
 .. image:: https://www.cellpose.org/static/images/benchmark_2d.png
-    :width: 400
+    :width: 800
 
 Table for 3D:
 
 .. image:: https://www.cellpose.org/static/images/benchmark_3d.png
-    :width: 400
+    :width: 800
 
 If you are running out of GPU memory for your images, you can reduce the 
 ``batch_size`` parameter in the ``model.eval`` function or in the CLI (default is 8).

docs/settings.rst

@@ -4,11 +4,13 @@ Settings
 --------------------------
 
 The important settings are described on this page. 
-See the :ref:`cpclass` for all run options.
+See the :ref:`cpmclass` for all run options.
 
 Here is an example of calling the Cellpose class and
 running a list of images for reference:
-::code-block::
+
+::
+
     from cellpose import models
     from cellpose.io import imread