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Commit 4991aa3

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Daniel Cameron
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Added rfPred to Dockerfile
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DESCRIPTION

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@@ -21,7 +21,8 @@ Depends:
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BSgenome.Hsapiens.UCSC.hg19,
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PolyPhen.Hsapiens.dbSNP131,
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COSMIC.67,
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org.Hs.eg.db
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org.Hs.eg.db,
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rfPred
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Suggests:
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knitr,
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rmarkdown,

Dockerfile

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@@ -30,7 +30,7 @@ RUN wget http://www.sbim.fr/rfPred/all_chr_rfPred.txtz && \
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WORKDIR /home/rstudio
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RUN Rscript -e "options(repos = c(CRAN = 'https://cran.r-project.org')); BiocManager::install(c('TxDb.Hsapiens.UCSC.hg19.knownGene', 'BSgenome.Hsapiens.UCSC.hg19', 'PolyPhen.Hsapiens.dbSNP131', 'VariantAnnotation', 'BioBase', 'tidyverse'), ask=FALSE)"
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RUN Rscript -e "options(repos = c(CRAN = 'https://cran.r-project.org')); BiocManager::install(c('TxDb.Hsapiens.UCSC.hg19.knownGene', 'BSgenome.Hsapiens.UCSC.hg19', 'PolyPhen.Hsapiens.dbSNP131', 'VariantAnnotation', 'BioBase', 'tidyverse', 'rfPred'), ask=FALSE)"
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COPY --chown=rstudio:rstudio . /home/rstudio/
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