Update validate.yaml (#1536)

* Update validate.yaml

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Update validate.yaml

---------

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

Author: lkstrp

.github/workflows/validate.yaml

@@ -14,19 +14,33 @@ jobs:
     name: Run validation
     if: github.event.pull_request.head.repo.full_name == github.repository
     runs-on: self-hosted
+    outputs:
+      validation_failed: ${{ steps.check_validation.outputs.failed }}
     steps:
     - uses: lkstrp/[email protected]
+      id: validation
+      continue-on-error: true
       with:
         step: run-self-hosted-validation
         env_file: envs/environment.yaml
         snakemake_config: config/test/config.validator.yaml
       env:
         GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+    - name: Check validation status
+      id: check_validation
+      run: |
+        if [[ "${{ steps.validation.outcome }}" == "failure" ]]; then
+          echo "failed=true" >> $GITHUB_OUTPUT
+        else
+          echo "failed=false" >> $GITHUB_OUTPUT
+        fi
 
   create-report:
     name: Create report
-    if: github.event.pull_request.head.repo.full_name == github.repository
     needs: run-validation
+    if: |
+      github.event.pull_request.head.repo.full_name == github.repository && 
+      needs.run-validation.outputs.validation_failed != 'true'
     runs-on: ubuntu-latest
     steps:
     - uses: lkstrp/[email protected]