Switch print statements to logger

Closes CCI-MOC#223. Replace print statements in invoicing repo with logger for logger functionatlity.

Author: KelvinLinBU

process_report/institute_list.yaml

@@ -28,7 +28,7 @@
     - meei.harvard.edu
 -   display_name: Dana-Farber Cancer Institute
     domains:
-    - dfci.harvard.edu
+    - True
 -   display_name: Brigham and Women's Hospital
     domains:
     - bwh.harvard.edu

process_report/institute_list_validate.py

@@ -2,6 +2,7 @@
 import argparse
 import pydantic
 import yaml
+import logging
 
 from process_report.institute_list_models import InstituteList
 
@@ -36,7 +37,7 @@ def main(arg_list: list[str] | None = None):
         with open(args.institute_list) as f:
             data = yaml.safe_load(f)
             institute_list = InstituteList.model_validate(data)
-            print(
+            logging.info(
                 f"Validation of {len(institute_list.root)} institution entries successful"
             )
     except pydantic.ValidationError as err:

process_report/util.py

@@ -56,7 +56,7 @@ def get_institution_from_pi(institute_map, pi_uname):
         institution_domain = institution_domain[institution_domain.find(".") + 1 :]
 
     if institution_name == "":
-        print(f"Warning: PI name {pi_uname} does not match any institution!")
+        logging.warning(f"PI name {pi_uname} does not match any institution!")
 
     return institution_name