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Auto remove obsoleted GO terms #138

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afg1 opened this issue Oct 19, 2022 · 0 comments
Open

Auto remove obsoleted GO terms #138

afg1 opened this issue Oct 19, 2022 · 0 comments

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@afg1
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afg1 commented Oct 19, 2022

We should automatically check for obsoloete GO terms and remove them.

I did this manually for the last release, with some sed commands around here:
https://github.com/RNAcentral/rnacentral-import-pipeline/blob/dev/workflows/lookup-ontology-info.nf#L13

Example command: sed -i '/GO:0000512/d' unique-terms.txt
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