NAMESPACE

# Generated by roxygen2: do not edit by hand

export(checkAndInitPipe)
export(createCatalogueDB)
export(deleteUorfTables)
export(featureAnalysis)
export(find_uORFome)
export(getAll)
export(getAllSequenceFeaturesTable)
export(getCandidateuORFs)
export(getIDsFromUorfs)
export(getLeadersFromCage)
export(getUorfsInDb)
export(listTables)
export(makeORFPredictionData)
export(makeTrainingAndPredictionData)
export(predictUorfs)
export(predictionVsCageHits)
export(readTable)
export(startCodonMetrics)
export(test.artificial)
export(verification.conf.matrix)
import(ORFik)
import(VennDiagram)
import(cowplot)
import(ggplot2)
import(gridExtra)
import(h2o)
import(scales)
importFrom(BiocParallel,bplapply)
importFrom(BiocParallel,bpparam)
importFrom(BiocParallel,register)
importFrom(BiocParallel,registered)
importFrom(DBI,dbConnect)
importFrom(DBI,dbListTables)
importFrom(GenomicRanges,start)
importFrom(RSQLite,SQLite)
importFrom(VennDiagram,venn.diagram)
importFrom(biomaRt,getBM)
importFrom(biomaRt,listDatasets)
importFrom(biomaRt,useEnsembl)
importFrom(biomartr,getGO)
importFrom(data.table,as.data.table)
importFrom(data.table,data.table)
importFrom(data.table,fread)
importFrom(data.table,melt)
importFrom(data.table,rbindlist)
importFrom(data.table,tstrsplit)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,theme_bw)
importFrom(ggpubr,ggscatter)
importFrom(tools,file_ext)