Skip to content
This repository was archived by the owner on Mar 29, 2022. It is now read-only.

Commit c69bc8d

Browse files
committed
streamlining example dockerfile for fastqc
1 parent bf15fda commit c69bc8d

File tree

1 file changed

+10
-10
lines changed

1 file changed

+10
-10
lines changed

docs/create_app_02.md

Lines changed: 10 additions & 10 deletions
Original file line numberDiff line numberDiff line change
@@ -114,16 +114,16 @@ resonable `Dockerfile`. The `Dockerfile` should be located at the root directory
114114
```
115115
FROM sd2e/base:ubuntu16
116116
117-
RUN apt-get update
118-
RUN apt-get upgrade -y
119-
RUN apt-get install wget -y
120-
RUN apt-get install zip -y
121-
RUN apt-get install default-jre -y
122-
123-
RUN wget https://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.11.5.zip
124-
RUN unzip fastqc_v0.11.5.zip
125-
RUN rm fastqc_v0.11.5.zip
126-
RUN chmod +x FastQC/fastqc
117+
RUN apt-get update \
118+
&& apt-get upgrade -y \
119+
&& apt-get install wget -y \
120+
&& apt-get install zip -y \
121+
&& apt-get install default-jre -y
122+
123+
RUN wget https://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.11.5.zip \
124+
&& unzip fastqc_v0.11.5.zip \
125+
&& rm fastqc_v0.11.5.zip \
126+
&& chmod +x FastQC/fastqc
127127
128128
ENV PATH "/FastQC/:$PATH"
129129
```

0 commit comments

Comments
 (0)