diff --git a/index.html b/index.html new file mode 100644 index 0000000..561a498 --- /dev/null +++ b/index.html @@ -0,0 +1,96 @@ + + + + + + + + + Safety Graphics + + + +
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+

Interactive Safety Graphics

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+

Overview

+

Welcome to the Interactive Safety Graphics home page. We make open source interactive graphics for monitoring + clinical trial safety. Check out a sample graphic along with + its paired clinical + workflow based on the medical literature, or explore your own data using the safetyGraphics R package shown below.

+ Safety Graphics Example +
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+

Background

+

The Interactive Safety Graphics (ISG) subteam of the ASA Biopharm-DIA Safety Working Group is an + interdisciplinary effort that, amongst other things, seeks to provide a clinical safety workflow for + monitoring during clinical development in an open source model. For more details see:

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  • About Page - learn more about our team's motivation and see a full list of team + members
    • +
  • Road Map - learn more about our active and planned projects
    • +
  • Contribution + guidelines - learn about how to contribute code to the project
    • +
+
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+

SafetyGraphics R Package

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The safetyGraphics R package makes it easy for users to evaluate their own clinical trial safety data in R. + The package provides a simple workflow to load lab data from clinical trials (AdAM or SDTM preferred).

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To learn more you can:

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+
+ + + + \ No newline at end of file diff --git a/index_raw.html b/index_raw.html new file mode 100644 index 0000000..b7672ab --- /dev/null +++ b/index_raw.html @@ -0,0 +1,90 @@ + + + + + + + + Safety Graphics + + + +
+
+

Interactive Safety Graphics

+
+ +
+
+ +
+ + +
+
+

Overview

+

Welcome to the Interactive Safety Graphics home page. We make open source interactive graphics for monitoring + clinical trial safety. Check out a sample graphic along with + its paired clinical + workflow based on the medical literature, or explore your own data using the safetyGraphics R package shown below.

+ Safety Graphics Example +
+
+

Background

+

The Interactive Safety Graphics (ISG) subteam of the ASA Biopharm-DIA Safety Working Group is an + interdisciplinary effort that, amongst other things, seeks to provide a clinical safety workflow for + monitoring during clinical development in an open source model. For more details see:

+
    +
  • About Page - learn more about our team's motivation and see a full list of team + members
    • +
  • Road Map - learn more about our active and planned projects
    • +
  • Contribution + guidelines - learn about how to contribute code to the project
    • +
+
+
+

SafetyGraphics R Package

+

The safetyGraphics R package makes it easy for users to evaluate their own clinical trial safety data in R. + The package provides a simple workflow to load lab data from clinical trials (AdAM or SDTM preferred).

+

To learn more you can:

+ +
+
+ + + + + + + \ No newline at end of file diff --git a/.gitignore b/old/.gitignore similarity index 100% rename from .gitignore rename to old/.gitignore diff --git a/CONTRIBUTING.md b/old/CONTRIBUTING.md similarity index 100% rename from CONTRIBUTING.md rename to old/CONTRIBUTING.md diff --git a/ISG Hepatic Safety Explorer User's Manual & Workflow v1.0.pdf b/old/ISG Hepatic Safety Explorer User's Manual & Workflow v1.0.pdf similarity index 100% rename from ISG Hepatic Safety Explorer User's Manual & Workflow v1.0.pdf rename to old/ISG Hepatic Safety Explorer User's Manual & Workflow v1.0.pdf diff --git a/LICENSE b/old/LICENSE similarity index 100% rename from LICENSE rename to old/LICENSE diff --git a/README.md b/old/README.md similarity index 100% rename from README.md rename to old/README.md diff --git a/_config.yml b/old/_config.yml similarity index 100% rename from _config.yml rename to old/_config.yml diff --git a/about.md b/old/about.md similarity index 100% rename from about.md rename to old/about.md diff --git a/guide/HepExplorerWorkflow_v1_0.pdf b/old/guide/HepExplorerWorkflow_v1_0.pdf similarity index 100% rename from guide/HepExplorerWorkflow_v1_0.pdf rename to old/guide/HepExplorerWorkflow_v1_0.pdf diff --git a/guide/HepExplorerWorkflow_v1_1.pdf b/old/guide/HepExplorerWorkflow_v1_1.pdf similarity index 100% rename from guide/HepExplorerWorkflow_v1_1.pdf rename to old/guide/HepExplorerWorkflow_v1_1.pdf diff --git a/guide/HepExplorerWorkflow_v1_2.pdf b/old/guide/HepExplorerWorkflow_v1_2.pdf similarity index 100% rename from guide/HepExplorerWorkflow_v1_2.pdf rename to old/guide/HepExplorerWorkflow_v1_2.pdf diff --git a/guide/HepExplorerWorkflow_v1_2_1.pdf b/old/guide/HepExplorerWorkflow_v1_2_1.pdf similarity index 100% rename from guide/HepExplorerWorkflow_v1_2_1.pdf rename to old/guide/HepExplorerWorkflow_v1_2_1.pdf diff --git a/pilot/SampleData_NoStandard.csv b/old/pilot/SampleData_NoStandard.csv similarity index 100% rename from pilot/SampleData_NoStandard.csv rename to old/pilot/SampleData_NoStandard.csv diff --git a/pilot/SampleData_PartialADaM.csv b/old/pilot/SampleData_PartialADaM.csv similarity index 100% rename from pilot/SampleData_PartialADaM.csv rename to old/pilot/SampleData_PartialADaM.csv diff --git a/pilot/SampleData_PartialSDTM.csv b/old/pilot/SampleData_PartialSDTM.csv similarity index 100% rename from pilot/SampleData_PartialSDTM.csv rename to old/pilot/SampleData_PartialSDTM.csv diff --git a/pilot/SampleData_SDTM.csv b/old/pilot/SampleData_SDTM.csv similarity index 100% rename from pilot/SampleData_SDTM.csv rename to old/pilot/SampleData_SDTM.csv diff --git a/pilot/introEmail.md b/old/pilot/introEmail.md similarity index 100% rename from pilot/introEmail.md rename to old/pilot/introEmail.md diff --git a/pilot/testerGuide.md b/old/pilot/testerGuide.md similarity index 100% rename from pilot/testerGuide.md rename to old/pilot/testerGuide.md diff --git a/presentations/SafetyGraphics_RPharma2020.pdf b/old/presentations/SafetyGraphics_RPharma2020.pdf similarity index 100% rename from presentations/SafetyGraphics_RPharma2020.pdf rename to old/presentations/SafetyGraphics_RPharma2020.pdf diff --git a/presentations/TechIntro.pdf b/old/presentations/TechIntro.pdf similarity index 100% rename from presentations/TechIntro.pdf rename to old/presentations/TechIntro.pdf diff --git a/roadmap.md b/old/roadmap.md similarity index 100% rename from roadmap.md rename to old/roadmap.md diff --git a/training/ex.csv b/old/training/ex.csv similarity index 100% rename from training/ex.csv rename to old/training/ex.csv diff --git a/training/index.css b/old/training/index.css similarity index 100% rename from training/index.css rename to old/training/index.css diff --git a/training/index.html b/old/training/index.html similarity index 100% rename from training/index.html rename to old/training/index.html diff --git a/training/index.js b/old/training/index.js similarity index 100% rename from training/index.js rename to old/training/index.js diff --git a/styles.css b/styles.css new file mode 100644 index 0000000..aaadb43 --- /dev/null +++ b/styles.css @@ -0,0 +1,22 @@ +.header-container { + background-color: #4CAF50; +} + +.nav-container .nav-link { + color: #333; +} + +.nav-container .nav-link:hover { + color: #4CAF50; + text-decoration: none; +} + +.header-logo { + width: 100px; + padding: 10px; +} + +.footer-container { + background-color: #f8f9fa; + border-top: 1px solid #e5e5e5; +} \ No newline at end of file diff --git a/styles_raw.css b/styles_raw.css new file mode 100644 index 0000000..8dfe50b --- /dev/null +++ b/styles_raw.css @@ -0,0 +1,85 @@ +body { + font-family: Arial, sans-serif; + line-height: 1.6; + margin: 0; + padding: 0; + color: #333; +} + +header { + background: #4CAF50; + padding: 20px; +} + +header h1 { + color: #fff; + margin: 0; +} + +nav { + display: flex; + justify-content: space-around; + background: #333; + padding: 15px 0; +} + +nav ul { + list-style: none; + padding: 0; +} + +nav ul li { + display: inline; + margin-left: 10px; +} + +nav ul li a { + text-decoration: none; + color: #fff; + font-weight: bold; +} + +main { + padding: 20px; +} + +main h2 { + border-bottom: 1px solid #ccc; + padding-bottom: 10px; +} + +section { + margin-bottom: 20px; +} + +footer { + background: #4CAF50; + padding: 20px; + text-align: center; + color: #fff; +} + +@media (max-width: 768px) { + nav { + flex-direction: column; + align-items: center; + } + + nav ul li { + display: block; + margin-bottom: 5px; + } +} + +/* header stuff */ +.header-container { + background-color: #4CAF50; + display: flex; + justify-content: space-between; + align-items: center; +} + +.header-logo { + width: 70px; + padding: 10px; +} \ No newline at end of file