Skip to content

Commit 74b143b

Browse files
authored
Merge pull request #1455 from sebapersson/petab
Re-add PEtab.jl tutorial to docs
2 parents 080e5cb + 4e0157e commit 74b143b

5 files changed

Lines changed: 863 additions & 575 deletions

File tree

docs/Project.toml

Lines changed: 4 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -23,9 +23,9 @@ ModelingToolkitBase = "7771a370-6774-4173-bd38-47e70ca0b839"
2323
NetworkLayout = "46757867-2c16-5918-afeb-47bfcb05e46a"
2424
NonlinearSolve = "8913a72c-1f9b-4ce2-8d82-65094dcecaec"
2525
NonlinearSolveFirstOrder = "5959db7a-ea39-4486-b5fe-2dd0bf03d60d"
26+
Optim = "429524aa-4258-5aef-a3af-852621145aeb"
2627
OptimizationBBO = "3e6eede4-6085-4f62-9a71-46d9bc1eb92b"
2728
OptimizationBase = "bca83a33-5cc9-4baa-983d-23429ab6bcbb"
28-
OptimizationEvolutionary = "cb963754-43f6-435e-8d4b-99009ff27753"
2929
OptimizationNLopt = "4e6fcdb7-1186-4e1f-a706-475e75c168bb"
3030
OptimizationOptimJL = "36348300-93cb-4f02-beb5-3c3902f8871e"
3131
OptimizationOptimisers = "42dfb2eb-d2b4-4451-abcd-913932933ac1"
@@ -35,6 +35,7 @@ OrdinaryDiffEqRosenbrock = "43230ef6-c299-4910-a778-202eb28ce4ce"
3535
OrdinaryDiffEqSDIRK = "2d112036-d095-4a1e-ab9a-08536f3ecdbf"
3636
OrdinaryDiffEqTsit5 = "b1df2697-797e-41e3-8120-5422d3b24e4a"
3737
OrdinaryDiffEqVerner = "79d7bb75-1356-48c1-b8c0-6832512096c2"
38+
PEtab = "48d54b35-e43e-4a66-a5a1-dde6b987cf69"
3839
Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
3940
QuasiMonteCarlo = "8a4e6c94-4038-4cdc-81c3-7e6ffdb2a71b"
4041
ReactionNetworkImporters = "b4db0fb7-de2a-5028-82bf-5021f5cfa881"
@@ -75,9 +76,9 @@ ModelingToolkitBase = "1.17"
7576
NetworkLayout = "0.4"
7677
NonlinearSolve = "4"
7778
NonlinearSolveFirstOrder = "1"
79+
Optim = "2"
7880
OptimizationBBO = "0.4"
7981
OptimizationBase = "4, 5.0"
80-
OptimizationEvolutionary = "0.4"
8182
OptimizationNLopt = "0.3"
8283
OptimizationOptimJL = "0.4"
8384
OptimizationOptimisers = "0.3"
@@ -87,6 +88,7 @@ OrdinaryDiffEqRosenbrock = "1"
8788
OrdinaryDiffEqSDIRK = "1"
8889
OrdinaryDiffEqTsit5 = "1"
8990
OrdinaryDiffEqVerner = "1"
91+
PEtab = "5"
9092
Plots = "1.40"
9193
QuasiMonteCarlo = "0.3"
9294
SciMLBase = "2.46"

0 commit comments

Comments
 (0)