Demo_PyRice.ipynb

{
 "cells": [
  {
   "cell_type": "code",
   "execution_count": 3,
   "metadata": {},
   "outputs": [],
   "source": [
    "from pyrice.multi_query import MultiQuery\n",
    "import time\n",
    "import csv\n",
    "from pyrice.utils import search\n",
    "from pyrice import utils\n",
    "from multiprocessing import cpu_count\n",
    "from argparse import ArgumentParser\n",
    "from pyrice.build_dictionary import update_gene_dictionary, update_local_database\n",
    "import pandas as pd\n",
    "from pandasql import sqldf\n",
    "\n",
    "utils.chrome_path = \"/Users/mac/Downloads/chromedriver\""
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 4,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "Output database: {'OsNippo01g010050': {'msu7Name': {'LOC_Os01g01010'}, 'raprepName': {'Os01g0100100'}, 'contig': 'chr01', 'fmin': 2982, 'fmax': 10815}, 'OsNippo01g010150': {'msu7Name': {'LOC_Os01g01019'}, 'raprepName': {'Os01g0100200'}, 'contig': 'chr01', 'fmin': 11217, 'fmax': 12435}, 'OsNippo01g010100': {'msu7Name': set(), 'raprepName': {'Os01g0100300'}, 'contig': 'chr01', 'fmin': 11371, 'fmax': 12284}, 'OsNippo01g010200': {'msu7Name': {'LOC_Os01g01030'}, 'raprepName': {'Os01g0100400'}, 'contig': 'chr01', 'fmin': 12720, 'fmax': 15685}, 'OsNippo01g010250': {'msu7Name': set(), 'raprepName': {'Os01g0100466'}, 'contig': 'chr01', 'fmin': 12807, 'fmax': 13978}, 'OsNippo01g010300': {'msu7Name': {'LOC_Os01g01040'}, 'raprepName': {'Os01g0100500'}, 'contig': 'chr01', 'fmin': 16398, 'fmax': 20144}}\n"
     ]
    }
   ],
   "source": [
    "# Search gene and query loc\n",
    "query = MultiQuery()\n",
    "result = query.search_on_chromosome(chro=\"chr01\", start_pos=\"1\",\n",
    "                           end_pos=\"20000\", number_process = 4, dbs=\"all\", save_path=\"./result/\")\n",
    "print(\"Output database:\", result)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 5,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "Query iricname: OsNippo01g010300 --- Gene 1/5\n",
      "Query iricname: OsNippo10g010050 --- Gene 2/5\n",
      "Query iricname: OsNippo07g234650 --- Gene 3/5\n",
      "Query iricname: OsNippo01g010050 --- Gene 4/5\n",
      "Query iricname: OsNippo08g047400 --- Gene 5/5\n",
      "Message: \n",
      "\n",
      "Output database: {'OsNippo01g010300': {'rapdb': {'Transcript_ID': 'Os01t0100500-01', 'Locus_ID': 'Os01g0100500', 'Description': 'Immunoglobulin-like domain containing protein.', 'Transcript evidence': 'AK067316 (DDBJ, Best hit)', 'ORF evidence': 'A2WJL2 (UniProt)', 'FLcDNA clone ID': 'J013104J17'}, 'gramene': {'_id': 'Os01g0100500', 'name': 'Os01g0100500', 'description': 'Immunoglobulin-like domain containing protein. (Os01t0100500-01)', 'biotype': 'protein_coding', 'taxon_id': 39947, 'system_name': 'oryza_sativa', 'db_type': 'core', 'gene_idx': 5, 'location': {'region': '1', 'start': 16399, 'end': 20144, 'strand': 1, 'map': 'GCA_001433935.1'}, 'xrefs': [{'db': 'UniParc', 'ids': ['UPI000009FFD9']}, {'db': 'Uniprot/SPTREMBL', 'ids': ['Q93VG6']}, {'db': 'protein_id', 'ids': ['BAF03650.1', 'BAE79749.1', 'EAZ10179.1', 'BAB64233.1', 'BAS69913.1', 'BAB62620.1']}, {'db': 'RefSeq_dna', 'ids': ['XM_026027108.1', 'XM_026027132.1', 'XM_026027147.1', 'NM_001361326.1', 'XM_026027124.1']}], 'gene_structure': {'exons': [{'id': 'Os01t0100500-01.exon1', 'start': 1, 'end': 578}, {'id': 'Os01t0100500-01.exon2', 'start': 985, 'end': 1076}, {'id': 'Os01t0100500-01.exon3', 'start': 1160, 'end': 1860}, {'id': 'Os01t0100500-01.exon4', 'start': 2103, 'end': 2173}, {'id': 'Os01t0100500-01.exon5', 'start': 2570, 'end': 2659}, {'id': 'Os01t0100500-01.exon6', 'start': 2744, 'end': 2923}, {'id': 'Os01t0100500-01.exon7', 'start': 3133, 'end': 3231}, {'id': 'Os01t0100500-01.exon8', 'start': 3336, 'end': 3746}], 'transcripts': [{'exons': ['Os01t0100500-01.exon1', 'Os01t0100500-01.exon2', 'Os01t0100500-01.exon3', 'Os01t0100500-01.exon4', 'Os01t0100500-01.exon5', 'Os01t0100500-01.exon6', 'Os01t0100500-01.exon7', 'Os01t0100500-01.exon8'], 'length': 2222, 'exon_junctions': [578, 670, 1371, 1442, 1532, 1712, 1811], 'cds': {'start': 201, 'end': 1775}, 'translation': {'id': 'Os01t0100500-01', 'length': 524, 'features': {}}, 'id': 'Os01t0100500-01'}], 'canonical_transcript': 'Os01t0100500-01'}, 'annotations': {'GO': {'entries': [{'id': 'GO:0016021', 'name': 'integral component of membrane', 'namespace': 'cellular_component', 'def': 'The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.', 'subset': ['goslim_chembl'], 'evidence_code': 'IEA'}], 'ancestors': [5575, 16020, 31224, 44425]}, 'taxonomy': {'entries': [{'_id': 39947, 'name': 'Oryza sativa Japonica Group'}], 'ancestors': [1, 2759, 3193, 3398, 4447, 4479, 4527, 4530, 4734, 33090, 35493, 38820, 58023, 58024, 78536, 131221, 131567, 147367, 147380, 359160, 1437183, 1437197, 1648021]}, 'familyRoot': {'entries': [{'_id': 3398, 'name': 'Magnoliophyta'}], 'ancestors': [1, 2759, 3193, 33090, 35493, 58023, 58024, 78536, 131221, 131567]}}, 'homology': {'gene_tree': {'id': 'EPlGT00140000007256', 'root_taxon_id': 3398, 'root_taxon_name': 'Magnoliophyta', 'representative': {'model': {'id': 'Os01g0100500', 'taxon_id': 39947, 'description': 'Immunoglobulin-like domain containing protein. (Os01t0100500-01)'}}}, 'homologous_genes': {'ortholog_one2one': ['BGIOSGA002572', 'OBART01G00050', 'KN538826.1_FG004', 'OPUNC01G00030', 'OB01G10030', 'AET3Gv20187700', 'TRIDC3BG014220', 'TraesCS3D02G086500', 'TraesCS3A02G086200', 'TRIDC3AG010450', 'TraesCS3B02G101600', 'BRADI_2g03770v3', 'TRIUR3_04634', 'Dr07621', 'DCAR_023849', 'PRUPE_6G359100', 'POPTR_013G087400v3', 'Tp57577_TGAC_v2_gene32005', 'MTR_7g079510', 'Bo3g012080', 'TanjilG_25241', 'LR48_Vigan03g041800', 'AT5G16520', 'Solyc04g051310.3', 'Csa_2G074060', 'TCM_025345', 'B456_004G260500', 'fgenesh2_kg.6__1642__AT5G16520.1', 'PHAVU_008G055900g', 'g00123', 'vigra.VC1973A.gnm6.ann1.Vradi04g07590', 'Bra006360', 'VIT_04s0023g00280', 'CCACVL1_06733', 'MANES_09G184200', 'PGSC0003DMG402016935', 'AMTR_s00020p00152550'], 'syntenic_ortholog_one2one': ['LPERR01G00030'], 'ortholog_one2many': ['SETIT_035124mg', 'Zm00001d029191', 'Zm00001d008386', 'SORBI_3001G369900', 'SORBI_3003G109700', 'GSMUA_Achr8G17460_001', 'GSMUA_Achr3G19470_001', 'HannXRQ_Chr11g0323931', 'GSBRNA2T00140562001', 'GSBRNA2T00130123001', 'GLYMA_09G252300', 'HannXRQ_Chr05g0156961', 'BVRB_2g024580', 'GLYMA_18G240300', 'BVRB_4g080840'], 'syntenic_ortholog_one2many': ['SETIT_000976mg']}}, 'bins': {'fixed_100': 3304, 'fixed_200': 6604, 'fixed_500': 16504, 'fixed_1000': 33006, 'uniform_1Mb': 31952, 'uniform_2Mb': 16095, 'uniform_5Mb': 6596, 'uniform_10Mb': 3411}, 'species_idx': 5}, 'msu': {'Genomic Sequence': ' >LOC_Os01g01040 AAGCAAAAGGACTCTGTATTTTCTGTGTTGTCTCCTCTAGTCCTCTCCTCCCTTCTGTTC CAGTCAGGACATACAAAGCAAAGATCCCTCCCTCTGCTGTGCAGGCTGCAGCAGGCGAGG AGAGGCAACCAGAGGGAGGGTAGGTTGGTTTGGAAGGAAGGAAGGAGAAGAGATAAACAA GTTAGGAGGAGACAAGCATCCGATTCCGAACTTTGATGGATCCCCTCCATATCTATCTTC CCATCCAATCCAATCTCTGCCCTCAATTGAGATTCGAGAGCTAAGCTAAGCCACGCCAAA TTAAGCCATGGCGTGCACGGCGGCGCGCATGTTCGCCTCCAACGCCACCCTCTGCGCCTG CGAGCCGGGCTTCTACCTCTCCGCCGCCATCAACGGCACCTGCCTCGGCCTGCCCGACGG CGGCTGGCAGGTCGGCTCCGTCGGCGCCTCCCGCAACCAGAGCTTCTACTTCCTCACCCC CGTCCTCTCCCTCGACGTCGTCCGCCGCCTCACCCAGTCCCAGGCCCTCCTCCTCGAGGC CACCATCGCTGCCCTCCTCTCCTGGCTTGCCTTTTGTGCCTTCGCCAGGTTCACCGGACA CGACCCCACCGGCAACAAGAGGCTCTTCCGCGCGCGCTTCTGGGTCAGCCGCCTCGACTG CATCTACGACACCACCCACTGGGCGGTTAGTTTTCTTTTTTTCCCCTTTTTTTTACTAAT AACATCTTGTTTCTTACAAATTTCTTTTGCCCTCGCCGAACTTAGATTTTCATCAAGGCC AAATTAATTGCTTTTGAGTCCTTCTACTCATGTCGAAATTGAGGATTGCTTTGCTTCGCT TGTTAGGAATCTCCTCTCCTAAGGAACAAGTTTTTGCTTTGCTACTACTTTAATTTCTTA TCCATCACACTCCTTTTGCCGCTCCTTCCTACTTCGGCACATTGCACTTTCTTACCAGTA TTAGATATTGGATATGGATATTATACATTATACACTACGAACACTCCTTATATCCAAGGA AATTTATTTTCTGCACTAATTTCTACTTTTCCAAGTTGCATTGAATATTGATGTACCTTG CCGTACTGTAGGATGACCAGCAAGTACTGAGGAAAAGAAAAACAGAGTTGGGTGGTACGT GCTCAGTAGCTAGCTTGATACTCTTCGTTGGATTAGTCACTGTGTAAGTGCTTAACAAAG TCTAGTGTTGGAAGGAATTTGTTACTCACTCACTAACAGGGTGTCTTCTTTCCTTGCTTG TTGCAGGCTGCTGTACCAAGCCATCCAAAGACGCAACATTGAAGTGCATCGGGTCAAACC AGCCAATGCTCCTGATTTGTTGTCTTTTGTCAATGATATCGAGTTCCACATAACCACCAT CTCTAGCATGTCTTGCTCTCAGTTGGTTGCCCCTTCTACAATTGCAATGGGAACACCTGG ATCTATGGACTTCAGGCTGCTGCCTTTGTCAACATTGTTGACATACAATTGCCAGAACAC GAGCCAGGGGCCATCTGTTTCACTCAAGTGCAATGGCTGCAGAATCCCGCCAAGAGACCA CTACGTATCCTGGCAATTTATTGACCTGCCAAGGCAACCAGCTGCCGCTGTTGGCTTCCA GTTTAATCTCACTGCGAAGCAACATGGAGATGACAAACATGTGAGCTCTGTCAGTGGAAC TATAAACTCCGACAATTTTACTGATGACAAGCTGAAGACATTCAGAGGGAGAGATTCCAA TGTGCTCAAGATTCAATTGTTTCCTCAAACATACATCAATCATCACAATTTGAAGCTTCT GCAACCTCTGGTTCAGGACTTCACTCAAGGTTCTACCTTTTCAAATGTTAGAAACTTGAA TGCTTCCTTGCAAAACCCTATGGATGGAATAATAAATACTACACTCTACATAAGCTATCT TTCCAACTACATTGTGGAGATTAGCAACGAAAATGTGCTAGGCCCAGGTGAGCTTTTCTA GTGATTGTTGATACCTACATAAGTCATCTTTCCAGCCTATTGAAAATGAAGTCTCTTTAC TTGTGAATTGTGGTGTTAATGTTACTAAGATTTACGCTACTAAGTACCAATACAAATATT TGAAATCCCGGTGCAAATATTTTCTCCATGATGGCTTTTTTAAATTTTTGGGCTTCTACT AATCTGAATAGTTTGTATTACTAGTATCTAATATGCTTATTTTCTGCAGTCAGTATACTT GCAAGTATTGGTGGCCTTTATGCCTTCAGTGTGGCAATATTTCTTTGCCTTATGGCTCAA GTAAGTCATCACAAATCTATCCCTGTTGTTTGTTTAAGATAAACTGCCAGTTTTTTTTTT CACTTTCGAGTTTTAACTAGCCTAACACTTGTTGACCTCTGAATCTTTGCATCTTTATGG GGTTTTCTGTTCCACTCAGAATTACTAATAGGCCATGAAAATTTTCTGATATTTTTTAAA TGAATTGAATTAACATACTTGCAATTTCCGCTCATTATCATGGTTCAAGGCGTGTGCTCT GGTGCACATCCTTCCTCGACAGCCAGCTGTCGATGTAAAACTTTTCTTGTAACCTTTTCT TCCTATCTTAATTACATTGAATGACCTCCTTCGGTCATTCCGGCAAAAAAGAAGATGACT TAGTATGCAGCTGTAATTGATGCTTTGTCTTTCCAGTGTGAAGCTAGGATAAAAAAGCTT CGAGACGAGGATTCCAGAATGCTAAAAATACTGAGGAAAAGACGTGCTCAACAGAATTGG GATAAGGTGAAGAATGTCCTGATCTAATGATGAACATTGTACCTACTAGACTGCATCCCT GATCAAGCATATCATTTTTCTTCCTAATAGGTGAGGAAGTTTGTCATGTATACCTGGGGC CCTAGCAACTTGGATCCAAGTGATAGAAGTGGCAAATGGCCTGAAAGTTCAGTGATGGAT TCTCTCCATGGATCCTTCCACAAGAAAAGAAAACCGATTAGACGAGCAACCTCGAATGGT AACAAACCTAAGAGAAATCCTGCTGACGCGGTAAAGTAACTGTCCTTTTCAACTACTCTT TATGGCACTATTTATACATTTGCCATTCAATACAGTAAAATACGTTTATACCAGAAAAAG GGTACCCTGTGTACATTTTTCGATACTCTTTTTTTTTACTTCATTCTTTCTCTGACAAGG TTTTACTTCATTCCTTGTTGAATGATTATCTTATTTTTCCTGTTTCAATGATATCACAGG GAGTTATTGACATCGAAAGAGTTGGGGAAATGCAGGAGTCGAGTAGTTCTAGACAGGCTT AATGGATGAAAGCTGTGGATGCTATTGGTCATTGAAATGTGATTGCTCTTAGTCTCTGAC TCATGGCTGATTCTACACAAATGTGCTTGTAATTTTTATCCCTTTCAATAGTTCCGCATA AAGAATTTTTTTGTTGCAGCAGCATCATTGGAGCGGCATACCGTGGCTTGGCTATATGGC AGGTCCAACACAACCGTACTACCAGAGAGGTTTTCTTGTATGTATGTTGCAACAAATGGG GAGAAATGTACGGAGTTTTAACTATTAATCAGCATGTTGGCTGCTGCCGAGGTCAGGCCA GAATCCTCTTTGATTTTCATGGGACTTCGTTTCTTGAGTTGTCGAACACTGTATATACCT TCACCAGTTACCACCCTCCACGTGCAATTACAGTGGGGAAGAAACAGAAAGATGCCTATC ATTTCTCTATATGAAGCAGATGGTGGCATTTGTATTTTAATTTATTACATCGTGTCATCG TGTAAATCTTCGTGTTGGTGTGATTCGCCGACCGTTTTCTAGCCGGCTGATTATATATGC CAAACTTATACTCCGTAAGTAGGGAAAGGTGACCTTCAGTTTCAGGTTGAGAGATTCTAC GTGGTACTGTGATAGCTCTTGCTTTTGATGGACATGTAATGTGTTGTTGTTGACTATGTG GTACTTTGTGATGCTTGGACATGTTTATATGTGGTGCTATGTTAAAAAATCCTGTTGAAA TTGTGTCAATTA ', 'CDS': ' >LOC_Os01g01040.1 ATGGCGTGCACGGCGGCGCGCATGTTCGCCTCCAACGCCACCCTCTGCGCCTGCGAGCCG GGCTTCTACCTCTCCGCCGCCATCAACGGCACCTGCCTCGGCCTGCCCGACGGCGGCTGG CAGGTCGGCTCCGTCGGCGCCTCCCGCAACCAGAGCTTCTACTTCCTCACCCCCGTCCTC TCCCTCGACGTCGTCCGCCGCCTCACCCAGTCCCAGGCCCTCCTCCTCGAGGCCACCATC GCTGCCCTCCTCTCCTGGCTTGCCTTTTGTGCCTTCGCCAGGTTCACCGGACACGACCCC ACCGGCAACAAGAGGCTCTTCCGCGCGCGCTTCTGGGTCAGCCGCCTCGACTGCATCTAC GACACCACCCACTGGGCGGATGACCAGCAAGTACTGAGGAAAAGAAAAACAGAGTTGGGT GGTACGTGCTCAGTAGCTAGCTTGATACTCTTCGTTGGATTAGTCACTGTGCTGCTGTAC CAAGCCATCCAAAGACGCAACATTGAAGTGCATCGGGTCAAACCAGCCAATGCTCCTGAT TTGTTGTCTTTTGTCAATGATATCGAGTTCCACATAACCACCATCTCTAGCATGTCTTGC TCTCAGTTGGTTGCCCCTTCTACAATTGCAATGGGAACACCTGGATCTATGGACTTCAGG CTGCTGCCTTTGTCAACATTGTTGACATACAATTGCCAGAACACGAGCCAGGGGCCATCT GTTTCACTCAAGTGCAATGGCTGCAGAATCCCGCCAAGAGACCACTACGTATCCTGGCAA TTTATTGACCTGCCAAGGCAACCAGCTGCCGCTGTTGGCTTCCAGTTTAATCTCACTGCG AAGCAACATGGAGATGACAAACATGTGAGCTCTGTCAGTGGAACTATAAACTCCGACAAT TTTACTGATGACAAGCTGAAGACATTCAGAGGGAGAGATTCCAATGTGCTCAAGATTCAA TTGTTTCCTCAAACATACATCAATCATCACAATTTGAAGCTTCTGCAACCTCTGGTTCAG GACTTCACTCAAGGTTCTACCTTTTCAAATGTTAGAAACTTGAATGCTTCCTTGCAAAAC CCTATGGATGGAATAATAAATACTACACTCTACATAAGCTATCTTTCCAACTACATTGTG GAGATTAGCAACGAAAATGTGCTAGGCCCAGTCAGTATACTTGCAAGTATTGGTGGCCTT TATGCCTTCAGTGTGGCAATATTTCTTTGCCTTATGGCTCAATGTGAAGCTAGGATAAAA AAGCTTCGAGACGAGGATTCCAGAATGCTAAAAATACTGAGGAAAAGACGTGCTCAACAG AATTGGGATAAGGTGAGGAAGTTTGTCATGTATACCTGGGGCCCTAGCAACTTGGATCCA AGTGATAGAAGTGGCAAATGGCCTGAAAGTTCAGTGATGGATTCTCTCCATGGATCCTTC CACAAGAAAAGAAAACCGATTAGACGAGCAACCTCGAATGGTAACAAACCTAAGAGAAAT CCTGCTGACGCGGGAGTTATTGACATCGAAAGAGTTGGGGAAATGCAGGAGTCGAGTAGT TCTAGACAGGCTTAA ', 'Protein': ' >LOC_Os01g01040.1 MACTAARMFASNATLCACEPGFYLSAAINGTCLGLPDGGWQVGSVGASRNQSFYFLTPVL SLDVVRRLTQSQALLLEATIAALLSWLAFCAFARFTGHDPTGNKRLFRARFWVSRLDCIY DTTHWADDQQVLRKRKTELGGTCSVASLILFVGLVTVLLYQAIQRRNIEVHRVKPANAPD LLSFVNDIEFHITTISSMSCSQLVAPSTIAMGTPGSMDFRLLPLSTLLTYNCQNTSQGPS VSLKCNGCRIPPRDHYVSWQFIDLPRQPAAAVGFQFNLTAKQHGDDKHVSSVSGTINSDN FTDDKLKTFRGRDSNVLKIQLFPQTYINHHNLKLLQPLVQDFTQGSTFSNVRNLNASLQN PMDGIINTTLYISYLSNYIVEISNENVLGPVSILASIGGLYAFSVAIFLCLMAQCEARIK KLRDEDSRMLKILRKRRAQQNWDKVRKFVMYTWGPSNLDPSDRSGKWPESSVMDSLHGSF HKKRKPIRRATSNGNKPKRNPADAGVIDIERVGEMQESSSSRQA* '}, 'ic4r': {'Anther_Normal': {'expression_value': '1.13467'}, 'Anther_WT': {'expression_value': '9.95931'}, 'Callus_Normal': {'expression_value': '4.30405'}, 'Leaf': {'expression_value': '1.16151'}, 'Leaf_35S:OSH1_-GR+DEX_24h_r1': {'expression_value': '14.0957'}, 'Leaf_35S:OSH1_-GR+DEX_24h_r2': {'expression_value': '17.2208'}, 'Leaf_35S:OSH1_-GR+DEX_3h_r1': {'expression_value': '12.0768'}, 'Leaf_35S:OSH1_-GR+DEX_3h_r2': {'expression_value': '14.7915'}, 'Leaf_35S:OSH1_-GR+DEX_6h_r1': {'expression_value': '14.0673'}, 'Leaf_35S:OSH1_-GR+DEX_6h_r2': {'expression_value': '14.0502'}, 'Leaf_35S:OSH1_-GR+DEX_r1': {'expression_value': '12.0923'}, 'Leaf_35S:OSH1_-GR+DEX_r2': {'expression_value': '13.9538'}, 'Leaf_B8-12_r1': {'expression_value': '16.5638'}, 'Leaf_B8-12_r2': {'expression_value': '16.6102'}, 'Leaf_B8-12_r3': {'expression_value': '16.8489'}, 'Leaf_BLS256_r1': {'expression_value': '15.717'}, 'Leaf_BLS256_r2': {'expression_value': '17.9762'}, 'Leaf_BLS256_r3': {'expression_value': '14.2022'}, 'Leaf_BLS279_r1': {'expression_value': '14.5179'}, 'Leaf_BLS279_r2': {'expression_value': '16.5851'}, 'Leaf_BLS279_r3': {'expression_value': '16.9224'}, 'Leaf_BXOR1_r1': {'expression_value': '15.5053'}, 'Leaf_BXOR1_r2': {'expression_value': '17.9537'}, 'Leaf_BXOR1_r3': {'expression_value': '15.8943'}, 'Leaf_CFBP2286_r1': {'expression_value': '18.1705'}, 'Leaf_CFBP2286_r2': {'expression_value': '15.9669'}, 'Leaf_CFBP2286_r3': {'expression_value': '17.347'}, 'Leaf_CFBP7331_r1': {'expression_value': '15.5038'}, 'Leaf_CFBP7331_r2': {'expression_value': '15.6611'}, 'Leaf_CFBP7331_r3': {'expression_value': '15.4962'}, 'Leaf_CFBP7341_r1': {'expression_value': '16.9122'}, 'Leaf_CFBP7341_r2': {'expression_value': '17.1482'}, 'Leaf_CFBP7341_r3': {'expression_value': '16.4974'}, 'Leaf_CFBP7342_r3': {'expression_value': '15.7275'}, 'Leaf_CFBP7342_r4': {'expression_value': '18.904'}, 'Leaf_CFBP7342_r5': {'expression_value': '16.8834'}, 'Leaf_L8_r1': {'expression_value': '14.6156'}, 'Leaf_L8_r2': {'expression_value': '15.5825'}, 'Leaf_L8_r3': {'expression_value': '15.0324'}, 'Leaf_Mock': {'expression_value': '14.1065'}, 'Leaf_Normal': {'expression_value': '14.8384'}, 'Leaf_Osbhlh148-DR_r1': {'expression_value': '15.5406'}, 'Leaf_Osbhlh148-DR_r2': {'expression_value': '17.1065'}, 'Leaf_Osbhlh148-WW_r1': {'expression_value': '12.4775'}, 'Leaf_Osbhlh148-WW_r2': {'expression_value': '12.1029'}, 'Leaf_Oshsfa2e-DR_r1': {'expression_value': '16.4958'}, 'Leaf_Oshsfa2e-DR_r2': {'expression_value': '19.0243'}, 'Leaf_Oshsfa2e-WW_r1': {'expression_value': '18.7062'}, 'Leaf_Oshsfa2e-WW_r2': {'expression_value': '16.0542'}, 'Leaf_PXO99A_BLS256 Tal11b_r1': {'expression_value': '19.8804'}, 'Leaf_PXO99A_BLS256 Tal11b_r2': {'expression_value': '18.2446'}, 'Leaf_PXO99A_BLS256 Tal2a_r1': {'expression_value': '18.6546'}, 'Leaf_PXO99A_BLS256 Tal2a_r2': {'expression_value': '20.3855'}, 'Leaf_PXO99A_dTal280_r1': {'expression_value': '12.1862'}, 'Leaf_PXO99A_dTal280_r2': {'expression_value': '12.8973'}, 'Leaf_RS105_r1': {'expression_value': '16.3726'}, 'Leaf_RS105_r2': {'expression_value': '15.4656'}, 'Leaf_RS105_r3': {'expression_value': '15.2232'}, 'Leaf_T2-PiZt-11-R': {'expression_value': '18.9157'}, 'Leaf_T2-PiZt-11-S': {'expression_value': '17.0672'}, 'Leaf_T4-PiZt-11-R': {'expression_value': '19.4719'}, 'Leaf_T4-PiZt-11-S': {'expression_value': '15.4433'}, 'Leaf_T6-Pi9-R': {'expression_value': '17.5929'}, 'Leaf_T6-PiZt-11-R': {'expression_value': '19.047'}, 'Leaf_T6-Spin1i-1-R': {'expression_value': '17.3972'}, 'Leaf_WT': {'expression_value': '9.00081'}, 'Leaf_WT-DEX_24h_r1': {'expression_value': '10.7675'}, 'Leaf_WT-DEX_24h_r2': {'expression_value': '12.9622'}, 'Leaf_WT-DEX_3h_r1': {'expression_value': '13.5438'}, 'Leaf_WT-DEX_3h_r2': {'expression_value': '13.0826'}, 'Leaf_WT-DEX_6h_r1': {'expression_value': '12.6872'}, 'Leaf_WT-DEX_6h_r2': {'expression_value': '13.3551'}, 'Leaf_WT-DEX_r1': {'expression_value': '11.4374'}, 'Leaf_WT-DEX_r2': {'expression_value': '13.4016'}, 'Leaf_WT-DR_SRP052306_r1': {'expression_value': '14.4338'}, 'Leaf_WT-DR_SRP052306_r2': {'expression_value': '18.7065'}, 'Leaf_WT-DR_SRP052309_r1': {'expression_value': '14.4338'}, 'Leaf_WT-DR_SRP052309_r2': {'expression_value': '18.7065'}, 'Leaf_WT-DR_SRP052310_r1': {'expression_value': '14.4338'}, 'Leaf_WT-DR_SRP052310_r2': {'expression_value': '18.7065'}, 'Leaf_WT-WW_SRP052306_r1': {'expression_value': '14.6678'}, 'Leaf_WT-WW_SRP052306_r2': {'expression_value': '13.1074'}, 'Leaf_WT-WW_SRP052309_r1': {'expression_value': '14.6678'}, 'Leaf_WT-WW_SRP052309_r2': {'expression_value': '13.1074'}, 'Leaf_WT-WW_SRP052310_r1': {'expression_value': '14.6678'}, 'Leaf_WT-WW_SRP052310_r2': {'expression_value': '13.1074'}, 'Leaf_WT2007': {'expression_value': '18.9839'}, 'Leaf_WT2011': {'expression_value': '19.0909'}, 'Leaf_r1': {'expression_value': '15.269'}, 'Leaf_r2': {'expression_value': '14.561'}, 'Leaf_r3': {'expression_value': '14.7217'}, 'Panicle': {'expression_value': '7.51047'}, 'Panicle_Normal': {'expression_value': '10.2642'}, 'Panicle_young_0.5cm': {'expression_value': '19.4427'}, 'Pistil_Normal': {'expression_value': '4.57471'}, 'Root': {'expression_value': '6.60684'}, 'Root_-Pi_0day_r1': {'expression_value': '21.455'}, 'Root_-Pi_0day_r2': {'expression_value': '24.59'}, 'Root_-Pi_22day_r1': {'expression_value': '20.8126'}, 'Root_-Pi_22day_r2': {'expression_value': '23.7975'}, 'Root_1h+Pi_r1': {'expression_value': '14.5548'}, 'Root_1h+Pi_r2': {'expression_value': '13.3275'}, 'Root_1h+Pi_r3': {'expression_value': '13.9818'}, 'Root_1h-Pi_r1': {'expression_value': '14.6488'}, 'Root_1h-Pi_r2': {'expression_value': '13.7282'}, 'Root_1h-Pi_r3': {'expression_value': '11.7324'}, 'Root_21d+1h+Pi_r1': {'expression_value': '12.9336'}, 'Root_21d+1h+Pi_r2': {'expression_value': '12.2815'}, 'Root_21d+1h+Pi_r3': {'expression_value': '15.9697'}, 'Root_21d+1h-Pi_r1': {'expression_value': '15.9331'}, 'Root_21d+1h-Pi_r2': {'expression_value': '14.4996'}, 'Root_21d+1h-Pi_r3': {'expression_value': '14.7159'}, 'Root_21d+1hRe_r1': {'expression_value': '11.3762'}, 'Root_21d+1hRe_r2': {'expression_value': '11.4974'}, 'Root_21d+1hRe_r3': {'expression_value': '11.1288'}, 'Root_21d+24h+Pi_r1': {'expression_value': '12.3433'}, 'Root_21d+24h+Pi_r2': {'expression_value': '14.3039'}, 'Root_21d+24h+Pi_r3': {'expression_value': '14.7623'}, 'Root_21d+24h-Pi_r1': {'expression_value': '16.0941'}, 'Root_21d+24h-Pi_r2': {'expression_value': '17.4303'}, 'Root_21d+24h-Pi_r3': {'expression_value': '16.0162'}, 'Root_21d+24hRe_r1': {'expression_value': '14.2858'}, 'Root_21d+24hRe_r2': {'expression_value': '14.673'}, 'Root_21d+24hRe_r3': {'expression_value': '15.095'}, 'Root_21d+6h+Pi_r1': {'expression_value': '12.3165'}, 'Root_21d+6h+Pi_r2': {'expression_value': '11.4452'}, 'Root_21d+6h+Pi_r3': {'expression_value': '15.2511'}, 'Root_21d+6h-Pi_r1': {'expression_value': '16.0065'}, 'Root_21d+6h-Pi_r2': {'expression_value': '18.4886'}, 'Root_21d+6h-Pi_r3': {'expression_value': '17.7937'}, 'Root_21d+6hRe_r1': {'expression_value': '15.8431'}, 'Root_21d+6hRe_r2': {'expression_value': '15.3017'}, 'Root_21d+6hRe_r3': {'expression_value': '15.9259'}, 'Root_21d-Pi&3d+Pi_r1': {'expression_value': '15.1939'}, 'Root_21d-Pi&3d+Pi_r2': {'expression_value': '15.8502'}, 'Root_21d3d+Pi_r1': {'expression_value': '16.7324'}, 'Root_21d3d+Pi_r2': {'expression_value': '18.9835'}, 'Root_21d3d+Pi_r3': {'expression_value': '18.7858'}, 'Root_21d3d-Pi_r1': {'expression_value': '20.7603'}, 'Root_21d3d-Pi_r2': {'expression_value': '17.4127'}, 'Root_21dd+Pi_r1': {'expression_value': '15.1603'}, 'Root_21dd+Pi_r2': {'expression_value': '13.9499'}, 'Root_21dd+Pi_r3': {'expression_value': '14.4485'}, 'Root_21dd-Pi_r1': {'expression_value': '14.0937'}, 'Root_21dd-Pi_r2': {'expression_value': '18.1396'}, 'Root_21dd-Pi_r3': {'expression_value': '15.1956'}, 'Root_24h+Pi_r1': {'expression_value': '16.2531'}, 'Root_24h+Pi_r2': {'expression_value': '15.6167'}, 'Root_24h+Pi_r3': {'expression_value': '17.7872'}, 'Root_24h-Pi_r1': {'expression_value': '13.8368'}, 'Root_24h-Pi_r2': {'expression_value': '17.4988'}, 'Root_24h-Pi_r3': {'expression_value': '15.391'}, 'Root_3d+Pi_r2': {'expression_value': '14.5775'}, 'Root_3d+Pi_r3': {'expression_value': '18.5691'}, 'Root_3d-Pi_r1': {'expression_value': '16.4316'}, 'Root_3d-Pi_r2': {'expression_value': '13.8605'}, 'Root_3d-Pi_r3': {'expression_value': '16.1702'}, 'Root_52d-Pi': {'expression_value': '14.0309'}, 'Root_6h+Pi_r1': {'expression_value': '15.8439'}, 'Root_6h+Pi_r2': {'expression_value': '13.1408'}, 'Root_6h+Pi_r3': {'expression_value': '13.759'}, 'Root_6h-Pi_r1': {'expression_value': '14.4061'}, 'Root_6h-Pi_r2': {'expression_value': '13.1969'}, 'Root_6h-Pi_r3': {'expression_value': '15.5964'}, 'Root_7d+Pi_r1': {'expression_value': '15.9439'}, 'Root_7d+Pi_r2': {'expression_value': '15.7159'}, 'Root_7d+Pi_r3': {'expression_value': '16.6505'}, 'Root_7d-Pi_r1': {'expression_value': '15.9341'}, 'Root_7d-Pi_r2': {'expression_value': '16.0247'}, 'Root_7d-Pi_r3': {'expression_value': '14.9984'}, 'Root_Cd_0h_r1': {'expression_value': '16.9891'}, 'Root_Cd_0h_r2': {'expression_value': '32.6682'}, 'Root_Cd_0h_r3': {'expression_value': '14.7773'}, 'Root_Cd_1h_r1': {'expression_value': '5.27604'}, 'Root_Cd_1h_r2': {'expression_value': '6.48477'}, 'Root_Cd_1h_r3': {'expression_value': '4.96667'}, 'Root_Cd_24h_r1': {'expression_value': '6.18019'}, 'Root_DCL3a_+Pi': {'expression_value': '17.5567'}, 'Root_DCL3a_-Pi': {'expression_value': '16.6419'}, 'Root_Normal': {'expression_value': '26.6791'}, 'Root_WT_+Pi': {'expression_value': '20.0666'}, 'Root_WT_-Pi': {'expression_value': '19.6439'}, 'Seed_Normal': {'expression_value': '4.32854'}, 'Seed_OsCMT3a_WT_r1': {'expression_value': '13.5587'}, 'Seed_OsCMT3a_WT_r2': {'expression_value': '14.3234'}, 'Seed_OsCMT3a_WT_r3': {'expression_value': '14.2842'}, 'Seed_aleurone_ABA&GA_4h': {'expression_value': '9.4282'}, 'Seed_aleurone_ABA_4h': {'expression_value': '9.97332'}, 'Seed_aleurone_GA_4h': {'expression_value': '9.71938'}, 'Seed_aleurone_Mock_4h': {'expression_value': '4.6151'}, 'Seed_oscmt3a_mutant _r1': {'expression_value': '15.0786'}, 'Seed_oscmt3a_mutant _r2': {'expression_value': '13.5982'}, 'Seed_oscmt3a_mutant _r3': {'expression_value': '13.6722'}, 'Shoot_1h+Pi_r1': {'expression_value': '4.67673'}, 'Shoot_1h+Pi_r2': {'expression_value': '4.50103'}, 'Shoot_1h+Pi_r3': {'expression_value': '4.96473'}, 'Shoot_1h-Pi_r1': {'expression_value': '4.83587'}, 'Shoot_1h-Pi_r2': {'expression_value': '4.97757'}, 'Shoot_1h-Pi_r3': {'expression_value': '4.51311'}, 'Shoot_21d+1h+Pi_r1': {'expression_value': '5.20205'}, 'Shoot_21d+1h+Pi_r2': {'expression_value': '5.5458'}, 'Shoot_21d+1h+Pi_r3': {'expression_value': '6.74197'}, 'Shoot_21d+1h-Pi_r1': {'expression_value': '9.3384'}, 'Shoot_21d+1h-Pi_r2': {'expression_value': '7.84275'}, 'Shoot_21d+1h-Pi_r3': {'expression_value': '7.89401'}, 'Shoot_21d+1hRe_r1': {'expression_value': '8.3357'}, 'Shoot_21d+1hRe_r2': {'expression_value': '9.15714'}, 'Shoot_21d+1hRe_r3': {'expression_value': '8.11712'}, 'Shoot_21d+24h+Pi_r1': {'expression_value': '5.42157'}, 'Shoot_21d+24h+Pi_r2': {'expression_value': '4.07746'}, 'Shoot_21d+24h+Pi_r3': {'expression_value': '5.24275'}, 'Shoot_21d+24h-Pi_r1': {'expression_value': '7.51189'}, 'Shoot_21d+24h-Pi_r2': {'expression_value': '7.2834'}, 'Shoot_21d+24h-Pi_r3': {'expression_value': '6.24534'}, 'Shoot_21d+24hRe_r1': {'expression_value': '6.87864'}, 'Shoot_21d+24hRe_r2': {'expression_value': '7.35812'}, 'Shoot_21d+24hRe_r3': {'expression_value': '8.51853'}, 'Shoot_21d+6h+Pi_r1': {'expression_value': '6.55607'}, 'Shoot_21d+6h+Pi_r2': {'expression_value': '5.48976'}, 'Shoot_21d+6h+Pi_r3': {'expression_value': '5.75797'}, 'Shoot_21d+6h-Pi_r1': {'expression_value': '7.71267'}, 'Shoot_21d+6h-Pi_r2': {'expression_value': '9.11474'}, 'Shoot_21d+6h-Pi_r3': {'expression_value': '7.99323'}, 'Shoot_21d+6hRe_r1': {'expression_value': '8.70391'}, 'Shoot_21d+6hRe_r2': {'expression_value': '7.86323'}, 'Shoot_21d+6hRe_r3': {'expression_value': '7.62836'}, 'Shoot_21dd+Pi_r1': {'expression_value': '4.80227'}, 'Shoot_21dd+Pi_r2': {'expression_value': '4.87255'}, 'Shoot_21dd+Pi_r3': {'expression_value': '4.87035'}, 'Shoot_21dd-Pi_r1': {'expression_value': '6.43395'}, 'Shoot_21dd-Pi_r2': {'expression_value': '6.96978'}, 'Shoot_21dd-Pi_r3': {'expression_value': '6.67192'}, 'Shoot_24h+Pi_r1': {'expression_value': '5.56162'}, 'Shoot_24h+Pi_r2': {'expression_value': '4.08762'}, 'Shoot_24h+Pi_r3': {'expression_value': '4.46722'}, 'Shoot_24h-Pi_r1': {'expression_value': '4.79528'}, 'Shoot_24h-Pi_r2': {'expression_value': '4.66661'}, 'Shoot_24h-Pi_r3': {'expression_value': '4.07174'}, 'Shoot_3d+Pi_r1': {'expression_value': '4.43006'}, 'Shoot_3d+Pi_r2': {'expression_value': '4.48012'}, 'Shoot_3d+Pi_r3': {'expression_value': '4.24971'}, 'Shoot_3d-Pi_r1': {'expression_value': '4.88567'}, 'Shoot_3d-Pi_r2': {'expression_value': '4.58202'}, 'Shoot_3d-Pi_r3': {'expression_value': '4.75115'}, 'Shoot_6h+Pi_r1': {'expression_value': '5.35367'}, 'Shoot_6h+Pi_r2': {'expression_value': '5.2926'}, 'Shoot_6h+Pi_r3': {'expression_value': '3.69349'}, 'Shoot_6h-Pi_r1': {'expression_value': '4.46846'}, 'Shoot_6h-Pi_r2': {'expression_value': '4.2953'}, 'Shoot_6h-Pi_r3': {'expression_value': '4.45468'}, 'Shoot_7d+Pi_r1': {'expression_value': '4.52637'}, 'Shoot_7d+Pi_r2': {'expression_value': '6.62897'}, 'Shoot_7d+Pi_r3': {'expression_value': '4.54998'}, 'Shoot_7d-Pi_r1': {'expression_value': '5.68743'}, 'Shoot_7d-Pi_r2': {'expression_value': '5.49127'}, 'Shoot_7d-Pi_r3': {'expression_value': '6.22671'}, 'Shoot_As(III)_24h': {'expression_value': '2.76777'}, 'Shoot_Cd_0h_r1': {'expression_value': '16.3452'}, 'Shoot_Cd_0h_r2': {'expression_value': '15.9898'}, 'Shoot_Cd_0h_r3': {'expression_value': '22.2351'}, 'Shoot_Cd_1h_r1': {'expression_value': '15.7276'}, 'Shoot_Cd_1h_r2': {'expression_value': '17.7129'}, 'Shoot_Cd_1h_r3': {'expression_value': '14.404'}, 'Shoot_Cd_24h_r1': {'expression_value': '17.5943'}, 'Shoot_Cd_24h_r2': {'expression_value': '11.7886'}, 'Shoot_Cd_24h_r3': {'expression_value': '14.6974'}, 'Shoot_MET1-2_Mm': {'expression_value': '14.0188'}, 'Shoot_MET1-2_WT': {'expression_value': '15.1897'}, 'Shoot_MET1-2_mm': {'expression_value': '11.1855'}, 'Shoot_Normal': {'expression_value': '3.99593'}, 'Shoot_WT': {'expression_value': '13.0696'}}, 'embl_ebi': {'9 Davidson - anther': '7', '9 Davidson - callus': 'NA', '9 Davidson - carpel': 'NA', '9 Davidson - early inflorescence': '42', '9 Davidson - emerging inflorescence': '29', '9 Davidson - endosperm': '8', '9 Davidson - leaf': '20', '9 Davidson - microgametophyte vegetative cell': 'NA', '9 Davidson - pistil': '19', '9 Davidson - plant egg cell': 'NA', '9 Davidson - plant embryo': '22', '9 Davidson - pollen sperm cell': 'NA', '9 Davidson - post-flowering panicle': 'NA', '9 Davidson - pre-flowering panicle': 'NA', '9 Davidson - root': 'NA', '9 Davidson - seed': 'NA', '9 Davidson - seed 10 days after pollination': '10', '9 Davidson - seed 5 days after pollination': '14', '9 Davidson - shoot': 'NA', '7 Sakai - anther': 'NA', '7 Sakai - callus': '11', '7 Sakai - carpel': 'NA', '7 Sakai - early inflorescence': 'NA', '7 Sakai - emerging inflorescence': 'NA', '7 Sakai - endosperm': 'NA', '7 Sakai - leaf': '36', '7 Sakai - microgametophyte vegetative cell': 'NA', '7 Sakai - pistil': 'NA', '7 Sakai - plant egg cell': 'NA', '7 Sakai - plant embryo': 'NA', '7 Sakai - pollen sperm cell': 'NA', '7 Sakai - post-flowering panicle': '29', '7 Sakai - pre-flowering panicle': '32', '7 Sakai - root': '65', '7 Sakai - seed': '20', '7 Sakai - seed 10 days after pollination': 'NA', '7 Sakai - seed 5 days after pollination': 'NA', '7 Sakai - shoot': '34', '4 Zhang et al - anther': '11', '4 Zhang et al - callus': 'NA', '4 Zhang et al - carpel': '31', '4 Zhang et al - early inflorescence': 'NA', '4 Zhang et al - emerging inflorescence': 'NA', '4 Zhang et al - endosperm': 'NA', '4 Zhang et al - leaf': 'NA', '4 Zhang et al - microgametophyte vegetative cell': 'NA', '4 Zhang et al - pistil': 'NA', '4 Zhang et al - plant egg cell': 'NA', '4 Zhang et al - plant embryo': 'NA', '4 Zhang et al - pollen sperm cell': 'NA', '4 Zhang et al - post-flowering panicle': 'NA', '4 Zhang et al - pre-flowering panicle': 'NA', '4 Zhang et al - root': 'NA', '4 Zhang et al - seed': '13', '4 Zhang et al - seed 10 days after pollination': 'NA', '4 Zhang et al - seed 5 days after pollination': 'NA', '4 Zhang et al - shoot': '23', 'Anderson et al - anther': 'NA', 'Anderson et al - callus': 'NA', 'Anderson et al - carpel': 'NA', 'Anderson et al - early inflorescence': 'NA', 'Anderson et al - emerging inflorescence': 'NA', 'Anderson et al - endosperm': 'NA', 'Anderson et al - leaf': 'NA', 'Anderson et al - microgametophyte vegetative cell': '2', 'Anderson et al - pistil': 'NA', 'Anderson et al - plant egg cell': '27', 'Anderson et al - plant embryo': 'NA', 'Anderson et al - pollen sperm cell': '22', 'Anderson et al - post-flowering panicle': 'NA', 'Anderson et al - pre-flowering panicle': 'NA', 'Anderson et al - root': 'NA', 'Anderson et al - seed': 'NA', 'Anderson et al - seed 10 days after pollination': 'NA', 'Anderson et al - seed 5 days after pollination': 'NA', 'Anderson et al - shoot': 'NA'}}, 'OsNippo10g010050': {'msu': {'Genomic Sequence': ' >LOC_Os10g01006 ATGGCGAGCATGGCGGCTAAGCGGCGACAAACGGTGACAGCGCAAGGCATGACGGCGGCG AGCAGTGGCGGCGGACAAGCGATGGCGCACGTGCATGAGCAGCGACGCACGACGGGAGAG AAGGTACAGAGAGGGGTCCTCACCGGTGAGCATGGCGGCTGGAGCGGAAGGGGAGATGGC GACGGCGACCCGACGGTTGGAGCAACGGATGGTGGTGGCGGCTAGGGCAAAGGCGCGGCA ACGGAATAGGGCGGTAATCCCGCCAATTTTGGAGGGGATAGGGGTGCGGCGGTTGCGGCG CGGATGGATAGAGACGTGGGGCACGAAGGGCGAGGCCGAGCGCGGCACGGGAGCAGAAGG AGCGGTAGTGGCAGTGGGAGTTTAGGGACGGGCCTGACGGGTGGGCCCCACCTATTGGTG TCATAGCGAGGGGAGCGAGCGCAGCTGGGCCGCGGCCTCTGGCCGACCCAACGCAAGGGC GCACGCGGGAGGGGAAGGAGGGGTGTGGGCCGGAAACGACCCACGGCCAAAGAGGGAGAG GAAGGAATTTAATTTAATTTAATGTTGATAATTACTTTGTACTTATTGAAATTACCTCCT TTGCTTTGAAAATTCTACTAAAAATCTTGTTAGTGTATGTAAACATGAGGAACTCGAGAA AAATTCCACCATGCAAATTCCACTTATTAATTGCATTGGTAAGTTAGAGTTAGCTCAAGG TAAAATTAAATAATTTCTCCGGGTGATTTATCAATGATTTTGGGACTAAGGAAAAAGTGA CAGCTGCCACGTGTTGATGACATAGCTACTTCTTGTTATAATTCAAGGCATCCTTCCTGA TAGTGTCCGAACAACAATAACAAGCATCGCCAAGGGGTATGGAACAGAGGAGGTCATTGA GTTTTGCTTAGAATATATTGAAGACCTTCGTCAAATCGGGGTTCCTGAATAAAGCCACGA GGGGAGACTACGGGGAAATGTGACTATTGTAAAACAATGATTTATTTCGGAAAACACATT TCACGGTTTTGCAACAATCTTCGATGGTGGCTCCTTACAACGAGGAGCAGTTGGCGGTTG TTTGCTCGAAAAATATCGTTAAGTACGATGCCTGGATTAGACGCCATCACATTGATACTT TCCTTGCTTGGTTGCGACAACTTCTCATGGGTAACGAGATGATTGATTAACAACTAGCAT TCTTGGCGAGGGTACCATGCATCTTGGTCAATCCTGATATTCCAAGGATATGAGATAAAT TGGTATACATTTTACACAGGAGCTCAAGACAAAAAGAGCATGAACCAGAACAGTGATATT TGTATCGATGCCATAAGATACGATTGGACAACTAGCACATATTATGGTGCCATCGACGAG ATATGGGAACTACACTATGGACCTCTGAATGTCAATCTGTTTCGGTGCCAATGGGTTAGG CTGACTGGTGGAGGCATAACGATTGATGACTATGGGATGACAACAGTTGACCTTAACAAG ATTGGATACTTAGACAAACCATTCGTCCTAGCCAATGATGTAACACAAGTTTTCTACGTG AAGGACATATGTCTAGCAAACCAAGAAGGGGAAAGGGCCCGACGAGTCAAAGTGCCACGT GGTTCTGCTAGGAAAAAGGAAAATCGTCGGATTCGAGGATAA ', 'CDS': ' >LOC_Os10g01006.1 ATGGCGAGCATGGCGGCTAAGCGGCGACAAACGGTGACAGCGCAAGGCATGACGGCGGCG AGCAGTGGCGGCGGACAAGCGATGGCGCACGTGCATGAGCAGCGACGCACGACGGGAGAG AAGGTACAGAGAGGGGTCCTCACCGGAGCTCAAGACAAAAAGAGCATGAACCAGAACAGT GATATTTGTATCGATGCCATAAGATACGATTGGACAACTAGCACATATTATGGTGCCATC GACGAGATATGGGAACTACACTATGGACCTCTGAATGTCAATCTGTTTCGGTGCCAATGG GTTAGGCTGACTGGTGGAGGCATAACGATTGATGACTATGGGATGACAACAGTTGACCTT AACAAGATTGGATACTTAGACAAACCATTCGTCCTAGCCAATGATGTAACACAAGTTTTC TACGTGAAGGACATATGTCTAGCAAACCAAGAAGGGGAAAGGGCCCGACGAGTCAAAGTG CCACGTGGTTCTGCTAGGAAAAAGGAAAATCGTCGGATTCGAGGATAA ', 'Protein': ' >LOC_Os10g01006.1 MASMAAKRRQTVTAQGMTAASSGGGQAMAHVHEQRRTTGEKVQRGVLTGAQDKKSMNQNS DICIDAIRYDWTTSTYYGAIDEIWELHYGPLNVNLFRCQWVRLTGGGITIDDYGMTTVDL NKIGYLDKPFVLANDVTQVFYVKDICLANQEGERARRVKVPRGSARKKENRRIRG* '}}, 'OsNippo07g234650': {'oryzabase': {'Trait Gene Id': '11042', 'CGSNL Gene Symbol': 'GELP92', 'Gene symbol synonym(s)': 'OsGELP92, OsGELP92a, OsGELP92b, OsGELP92c, AChE', 'CGSNL Gene Name': 'GDSL ESTERASE/LIPASE PROTEIN 92', 'Gene name synonym(s)': 'GDSL esterase/lipase protein 92, acetylcholinesterase', 'Protein Name': 'GDSL ESTERASE/LIPASE PROTEIN 92', 'Trait Class': ' Biochemical character,  Tolerance and resistance - Stress tolerance', 'RAP ID': 'Os07g0586200', 'MUS ID': 'LOC_Os07g39750.3, LOC_Os07g39750.2, LOC_Os07g39750.1', 'Gene Ontology': 'GO:0016788 - hydrolase activity, acting on ester bonds, GO:0004560 - alpha-L-fucosidase activity, GO:0006629 - lipid metabolic process, GO:0009630 - gravitropism, GO:0009629 - response to gravity, GO:0009505 - plant-type cell wall', 'Trait Ontology': 'TO:0002693 - gravity response trait'}, 'rapdb': {'Transcript_ID': 'Os07t0586200-01', 'Locus_ID': 'Os07g0586200', 'Description': 'Similar to Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13).', 'CGSNL Gene Symbol': 'GELP92', 'CGSNL Gene Name': 'GDSL ESTERASE/LIPASE PROTEIN 92', 'Oryzabase Gene Symbol Synonym(s)': 'OsGELP92, OsGELP92a, OsGELP92b, OsGELP92c, AChE', 'Oryzabase Gene Name Synonym(s)': 'GDSL esterase/lipase protein 92, acetylcholinesterase', 'GO': 'Biological Process: lipid metabolic process (GO:0006629), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788)', 'InterPro': 'Lipase, GDSL (IPR001087)', 'Transcript evidence': 'AK073754 (DDBJ, Best hit)', 'ORF evidence': 'B4FZ87 (UniProt)', 'FLcDNA clone ID': 'J033067M09', 'Oryzabase Trait Gene ID': '11042\\n'}, 'gramene': {'_id': 'Os07g0586200', 'name': 'GDSL ESTERASE/LIPASE PROTEIN 92', 'description': 'Similar to Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13). (Os07t0586200-01);Similar to Alpha-L-fucosidase 2. (Os07t0586200-02);Similar to Alpha-L-fucosidase 2. (Os07t0586200-03)', 'biotype': 'protein_coding', 'taxon_id': 39947, 'system_name': 'oryza_sativa', 'db_type': 'core', 'gene_idx': 24889, 'location': {'region': '7', 'start': 23820385, 'end': 23824129, 'strand': -1, 'map': 'GCA_001433935.1'}, 'xrefs': [{'db': 'CGSNL', 'ids': ['GELP92']}, {'db': 'UniParc', 'ids': ['UPI00001B3B41']}, {'db': 'Uniprot/SPTREMBL', 'ids': ['Q7XHN4']}, {'db': 'STRING', 'ids': ['39947.LOC_Os07g39750.1']}, {'db': 'RefSeq_peptide', 'ids': ['XP_015645426.1']}, {'db': 'EMBL', 'ids': ['AK073754']}, {'db': 'protein_id', 'ids': ['BAT02389.1', 'BAF22043.1', 'EAZ40467.1', 'BAC80100.1']}, {'db': 'RefSeq_dna', 'ids': ['XM_015789940.1']}, {'db': 'Oryzabase', 'ids': ['OsGELP92, OsGELP92a, OsGELP92b, OsGELP92c, AChE']}, {'db': 'EntrezGene', 'ids': ['4343749']}], 'gene_structure': {'exons': [{'id': 'Os07t0586200-03.exon1', 'start': 631, 'end': 654}, {'id': 'Os07t0586200-03.exon2', 'start': 2001, 'end': 2213}, {'id': 'Os07t0586200-03.exon3', 'start': 2309, 'end': 2478}, {'id': 'Os07t0586200-03.exon4', 'start': 2938, 'end': 3208}, {'id': 'Os07t0586200-03.exon5', 'start': 3291, 'end': 3736}, {'id': 'Os07t0586200-02.exon1', 'start': 2000, 'end': 2213}, {'id': 'Os07t0586200-02.exon4', 'start': 3291, 'end': 3745}, {'id': 'Os07t0586200-01.exon1', 'start': 1, 'end': 654}], 'transcripts': [{'exons': ['Os07t0586200-01.exon1', 'Os07t0586200-03.exon2', 'Os07t0586200-03.exon3', 'Os07t0586200-03.exon4', 'Os07t0586200-03.exon5'], 'length': 1754, 'exon_junctions': [654, 867, 1037, 1308], 'cds': {'start': 405, 'end': 1580}, 'translation': {'id': 'Os07t0586200-01', 'length': 391, 'features': {'domain': {'entries': [{'name': 'PF00657', 'description': 'Lipase_GDSL', 'db': 'Pfam', 'interpro': 'IPR001087', 'start': 37, 'end': 369}, {'name': 'cd01837', 'description': 'SGNH_plant_lipase_like', 'db': 'CDD', 'interpro': 'IPR035669', 'start': 35, 'end': 372}], 'architecture': [{'root': '13830', 'start': 35, 'end': 372, 'interpro': 'IPR001087', 'name': 'GDSL', 'description': 'GDSL lipase/esterase'}], 'roots': '13830'}, 'homologous_superfamily': {'entries': [{'name': '3.40.50.1110', 'description': None, 'db': 'Gene3D', 'interpro': 'IPR036514', 'start': 25, 'end': 373}]}}}, 'id': 'Os07t0586200-01'}, {'exons': ['Os07t0586200-02.exon1', 'Os07t0586200-03.exon3', 'Os07t0586200-03.exon4', 'Os07t0586200-02.exon4'], 'length': 1110, 'exon_junctions': [214, 384, 655], 'cds': {'start': 1, 'end': 927}, 'translation': {'id': 'Os07t0586200-02', 'length': 308, 'features': {'domain': {'entries': [{'name': 'PF00657', 'description': 'Lipase_GDSL', 'db': 'Pfam', 'interpro': 'IPR001087', 'start': 17, 'end': 286}], 'architecture': [{'root': '13830', 'start': 17, 'end': 286, 'interpro': 'IPR001087', 'name': 'GDSL', 'description': 'GDSL lipase/esterase'}], 'roots': '13830'}, 'homologous_superfamily': {'entries': [{'name': '3.40.50.1110', 'description': None, 'db': 'Gene3D', 'interpro': 'IPR036514', 'start': 1, 'end': 290}]}}}, 'id': 'Os07t0586200-02'}, {'exons': ['Os07t0586200-03.exon1', 'Os07t0586200-03.exon2', 'Os07t0586200-03.exon3', 'Os07t0586200-03.exon4', 'Os07t0586200-03.exon5'], 'length': 1124, 'exon_junctions': [24, 237, 407, 678], 'cds': {'start': 3, 'end': 950}, 'translation': {'id': 'Os07t0586200-03', 'length': 315, 'features': {'domain': {'entries': [{'name': 'PF00657', 'description': 'Lipase_GDSL', 'db': 'Pfam', 'interpro': 'IPR001087', 'start': 24, 'end': 293}, {'name': 'cd01837', 'description': 'SGNH_plant_lipase_like', 'db': 'CDD', 'interpro': 'IPR035669', 'start': 1, 'end': 296}], 'architecture': [{'root': '13830', 'start': 1, 'end': 296, 'interpro': 'IPR001087', 'name': 'GDSL', 'description': 'GDSL lipase/esterase'}], 'roots': '13830'}, 'homologous_superfamily': {'entries': [{'name': '3.40.50.1110', 'description': None, 'db': 'Gene3D', 'interpro': 'IPR036514', 'start': 1, 'end': 297}]}}}, 'id': 'Os07t0586200-03'}], 'canonical_transcript': 'Os07t0586200-01'}, 'annotations': {'domains': {'entries': [{'id': 'IPR035669', 'name': 'SGNH_plant_lipase_like', 'description': 'GDSL lipase/esterase-like, plant'}, {'id': 'IPR036514', 'name': 'SGNH_hydro_sf', 'description': 'SGNH hydrolase superfamily'}], 'ancestors': [1087, 13830]}, 'GO': {'entries': [{'id': 'GO:0016788', 'name': 'hydrolase activity, acting on ester bonds', 'namespace': 'molecular_function', 'def': 'Catalysis of the hydrolysis of any ester bond.', 'subset': ['goslim_chembl'], 'evidence_code': 'IEA'}], 'ancestors': [3674, 3824, 16787]}, 'taxonomy': {'entries': [{'_id': 39947, 'name': 'Oryza sativa Japonica Group'}], 'ancestors': [1, 2759, 3193, 3398, 4447, 4479, 4527, 4530, 4734, 33090, 35493, 38820, 58023, 58024, 78536, 131221, 131567, 147367, 147380, 359160, 1437183, 1437197, 1648021]}, 'familyRoot': {'entries': [{'_id': 58023, 'name': 'Tracheophyta'}], 'ancestors': [1, 2759, 3193, 33090, 35493, 131221, 131567]}}, 'homology': {'gene_tree': {'id': 'EPlGT00940000163132', 'root_taxon_id': 58023, 'root_taxon_name': 'Tracheophyta', 'duplications': [3398, 4479], 'representative': {'model': {'id': 'AT1G67830', 'taxon_id': 3702, 'name': 'FXG1', 'description': 'Alpha-L-fucosidase 3'}}}, 'homologous_genes': {'ortholog_one2one': ['ORUFI07G21240', 'BGIOSGA023998', 'OBART07G20360', 'OGLUM07G20150', 'OMERI07G17030', 'OPUNC07G19190', 'OB07G26060', 'LPERR07G17680', 'TraesCS2A02G192100', 'BRADI_1g23120v3', 'TRIUR3_31828', 'TraesCS2D02G195400', 'TraesCS2B02G214000', 'TRIDC2BG028400', 'AET2Gv20390300', 'SETIT_030054mg', 'Zm00001d021961', 'SORBI_3002G356800'], 'syntenic_ortholog_one2one': ['ONIVA07G18780', 'ORGLA07G0156100'], 'ortholog_one2many': ['TRIDC2AG075790', 'TRIDC2AG024600', 'Dr08079', 'vigra.VC1973A.gnm6.ann1.Vradi0007s00240', 'Solyc05g013680.3', 'Csa_5G598030', 'SELMODRAFT_416226'], 'within_species_paralog': ['Os07g0586100', 'Os05g0401000'], 'ortholog_many2many': ['POPTR_010G047900v3', 'PHAVU_001G107900g', 'AMTR_s00099p00110810', 'GSBRNA2T00078048001', 'GSBRNA2T00113039001', 'PGSC0003DMG401018597', 'GSMUA_Achr6G28090_001', 'GSBRNA2T00052576001', 'VIT_01s0137g00720', 'GSMUA_Achr9G01910_001', 'Bra033975', 'HannXRQ_Chr10g0310211', 'TCM_010571', 'AT3G26430', 'DCAR_026505', 'LR48_Vigan01g030900', 'GSMUA_AchrUn_randomG11790_001', 'PHAVU_002G259500g', 'Bra004263', 'Tp57577_TGAC_v2_gene6233', 'HannXRQ_Chr12g0371961', 'GSBRNA2T00070195001', 'B456_005G176900', 'AT1G67830', 'Bo6g106290', 'MANES_12G021600', 'MTR_7g087190', 'BVRB_6g146910', 'PRUPE_1G246600', 'Bo2g056260', 'GSBRNA2T00113048001', 'HannXRQ_Chr12g0385791', 'HannXRQ_Chr08g0208321', 'Bo09080s010', 'BVRB_6g146900', 'Tp57577_TGAC_v2_gene6242', 'GLYMA_19G120000', 'AMTR_s00049p00229270', 'GLYMA_03G006200', 'B456_005G177000', 'TanjilG_19868', 'PGSC0003DMG402018597', 'Bo6g106360', 'MANES_13G022500', 'Bra025206', 'GSMUA_Achr9G01900_001', 'VIT_01s0137g00730', 'fgenesh2_kg.2__1020__AT1G67830.1', 'PRUPE_1G246700', 'LR48_Vigan03g201900', 'A4A49_39174', 'g21110', 'A4A49_32491', 'Bo2g056270', 'VIT_01s0137g00710', 'MTR_8g089805', 'GSBRNA2T00017973001', 'TanjilG_00062', 'B456_005G177100', 'BVRB_6g146890', 'B456_002G188000', 'fgenesh1_pm.C_scaffold_5000322', 'Bo26969s010', 'Bo7g082660', 'TCM_010576', 'HannXRQ_Chr12g0371971', 'GSBRNA2T00139283001', 'GSMUA_AchrUn_randomG11800_001', 'POPTR_010G048000v3', 'DCAR_007046', 'POPTR_008G185500v3', 'Tp57577_TGAC_v2_gene7820', 'HannXRQ_Chr08g0208331', 'g20736', 'TCM_010574', 'GLYMA_08G131700']}}, 'bins': {'fixed_100': 3365, 'fixed_200': 6730, 'fixed_500': 16819, 'fixed_1000': 33638, 'uniform_1Mb': 32192, 'uniform_2Mb': 16216, 'uniform_5Mb': 6648, 'uniform_10Mb': 3439}, 'species_idx': 5}, 'funricegene_genekeywords': {'Symbol': \"{'AChE'}\", 'RAPdb': \"{'Os07g0586200'}\", 'MSU': \"{'LOC_Os07g39750'}\", 'Keyword': \"{'seedlings', 'shoot gravitropism', 'gravitropic response', 'acetylcholinesterase'}\", 'Title': \"{'Overexpression of acetylcholinesterase gene in rice results in enhancement of shoot gravitropism', 'Overexpression of acetylcholinesterase gene in rice results in enhancement of shoot gravitropism.'}\"}, 'funricegene_faminfo': {'Symbol': \"{'GELP92'}\", 'RAPdb': \"{'Os07g0586200'}\", 'MSU': \"{'LOC_Os07g39750'}\", 'Name': \"{'GELP'}\"}, 'msu': {'Genomic Sequence': ' >LOC_Os07g39750 GGGCCGGCACACCGTGCGCTGTGCTCCACTCCACCATCGCTCGCGACCCGCGCCCACGCC CGCGCACCACCACACCACACCATACCACACCACGGCCATCTCGTCAGTCAGTGTGACCCA TCCGGCCATCCCACCGCGCCCTCCCCCTCCCATCGCTGTCGTCCACGGCACCGCGTCGCG TTTGGGGTCTCCCACCGTTCTCTCCCGCACGCGCGCGGTCCCGCCTCCCGCCTATCTCTA TCCGCAGATCCACAACCATCCATCTCCATTCGCCATTTCCGCCCACTGCCACGCCAACGC CACTGCTGCTAAGCTCCGCCTCGTCTTCCGCCCACGCTGCTCTGCTCGTCGTCGCTCTCG CTCGCAGTGCCCCGCGCGCGCGAACGAGGCGTGGTGGGGGGGTAATGGCGCCTCCTCCGT ACGCAGCCGCGGTGGTGGTGGCGACCGTCGCCGTGCTGGTGCTGGTGTCGCAGGTCTCAG TGGCCGCCGGCGCGGACTGCCGCTTCCCGGCCGTGTTCAACTTCGGCGACTCCAACTCCG ACACGGGCGGGCTGTCGGCCACCTTCGGCGCCGCGCCGCCGCCCAACGGCAGGACCTTCT TCGGCATGCCCGTCGGCCGCTACTGCGACGGCCGCCTCGTCATCGACTTCATCGGTACGT ACGTCTCTGAATCACTGCAACCAGAGTCTTTTTCTTTCCCCTGCACGTCTTAATCAGCTA ATTAACCTTCTCTCGTTCTTTCTATTATCAACTTTTCACTGCCTCTTCTTCCGCACGACT GCACGTAGGGCCCTTGAGCCTTGACTGCATATACTTGATCGAACTGAAACCTACTCCCAC TCTGAACCAATAAATATCAGCTTTAATTCGTTCCATGTGTAGGTTGCAGACACGAGATGT TTCAGCGTTTGCTGCTCGAGTGTTTTAGTGTCTCGCAATGGTTAAGCCCAAATTAAAAGT AAAAACGAACGTCTGAACAGGTTGCTCGATTGCTTTAGAACAAATGTCCGCAAAAGAAAG AGAAGGTCTACCATTTTCACGTACTGATTGATTGCTAGTGCTGTGATATCCGGCAAGCTG GCTACAACCAGCCAAGACCCAACCCAACAGTTCTAAAAAAAAAGAACCAACCCAACCATG GCCATAATTATTGACGAGCGGCCCGTGTGTCCGTGCCAACGATGGCATCGATTACACGGT ATTATTGTTACTGCAACAAGTTGCTGCCGAGCGCCGACACGATCTCGATATATTCCCCAC AATCCGACGAAAGGCCGGCCAGTAACTCGCGGCAAAGCATCTCTAGATACGGTCACGCCA CTGCTATCAGCCATGCGATCCTCGCGGGGAGATTTTGTAGAGAGGATGTTGCATTGCAGC TGGGGAATATATCAGATACTCCTCCTTTATTTAGCTTTTGATACGAGAGACAGAAAGAAA CATTACCTTAAGATAGTAGTTTGGTGGCCCTAAGGGGTCTTTTAGAAAGTTTTAGTGGTC GCTGGCCAGAAAAACTGGGAGACAAAACAGCCATGAGCTTATCATATATGCCATGCTATG CAATATTCGCTGCAGATTGTGGAAGTTTTGCTTTATAAATTCTGATTGCAGTTGAAGCAT TCTGGTATAAAGTGGTGGCATTAGCATAAAGTTGTCCTGGCTAATTGGGAGAGGACCGCA AGAATAGTTGAGTAGTACACAGCAGTAGAAACCATGAACTGGAGTAGTAACCATTTGCAC ATGGCTCTGAACTCGGGTTCTTGTCGTCACCAACACCACTGACAGAGACGCATGTGAAAC TTATTTGAACCATTCGCCATGTACCTTAACTTTGTGATGCATGGCAGTCCGTGCTATAGC TTTGGTGCTGGTTGTAAAAGCTTCAGGCTTCAACTCACACTCTTCGGAAATCATCAAATG CAACGAGATTACTGCTATTTGAACGATCAAATGCAGATTCTTACTGTGTAAACACACACT CTTGCTCTCTGATGCTGCAGCTGAAAGCCTGGGACTGCCTTACCTCAGTGCGTACCTCAA CTCGATAGGAAGTAACTTCACACAAGGTGCTAACTTTGCAACGGCCGGGTCGTCAATCAG AAGGCAGAACACATCTTTGTTCCTCTCTGGTTTCAGCCCCATTTCCTTGGACGTGCAGTC CTGGGAGTTTGAACAGTTCATCAACAGAAGCCAGTTCGTCTATAACAACAAAGGTGACAA GAAAACCAAAAAATCCATTTCTGTCAGTAATTCAGTACCACGTTGAACCCAACAATCACG TTCTGTTTCGCTCCATTTCTTCACATAGGTGGAATCTACAGGGAGCTCCTACCCAAGGCT GAATACTTCTCTCAGGCGCTCTACACATTCGATATCGGCCAGAATGACATTACCACAGGC TTCTTCATAAACATGACCTCTGAACAAGTCATAGCTTACATCCCTGATCTAATGGAAAGG CTCACGAACATAATCCAGGTACAGAGATTGTACAATACTCCTACTATTTTCTTCAAAACT CAAAAGAACACCAAATTATTCTTCTCCGCTAATAACAGCAGTAGTGTAGCACATACATGC AGGGTTCTATATTGCAGAAAGAAAAAAAAACAGGGGTACCGATCGATCCTAATTTTTTGA AATTGCAGAAATTTCAGAATATTCTAGTCTGAAATAATTTGAATATTTTTCTAAAATAGT TTCCTATCGGGGGACCGAAGTTGCCAAAAAGAAAATTTCGAACTGAAATATGGAACTCTA CACATATGATTGTGTTTAGATTGGCCCAAAGTTTAGAATTTGGTTGAAATTGGAGACGGT GTGACTGAAAAGTTATGTGCGTATGAAAGGTTTAATGTGATGCAAAGTTGGAAGTTTGGA AAAAAAAACTTTGTAACTAAACACACCCATATACATGAGCTGATTGGTAACCTGCAGAAT GTGTACGGTCTCGGAGGAAGGTACTTCTGGATTCACAACACGGGGCCGATCGGCTGCCTG CCTTACGCCATGGTGCACCGCCCCGACCTCGCCGTCGTCAAGGACGGGTCCGGCTGCTCC GTCGCCTACAACGAGGTCGCCCAGCTCTTCAACCAGAGGCTGAAGGAAACCGTGGGCCAC CTCCGGAAGACCCACGCCGACGCCGCGTTCACCTACGTCGACGTCTACTCCGCCAAGTAC AAGCTGATCAGCGACGCCAAGAAGCTCGGTAAAGCTTAGCTAGTTGTGCCTAGCGAGCTC GTGCAATCCCCCCCGTGCCATTGGCGTGATGTGTTGTGTTGTGGCTGCAGGGATGGATGA CCCGATGCTGACGTGCTGCGGCTACGGCGGCGGGAGGTACAACTTCGACGACAGGGTCGG GTGCGGCGGGAAGGTGAAGGTGAACGGGACGTGGGTGGTGGCGGGGAAGTCGTGCGACGA CCCGCTGAAGCGGGTGAGCTGGGACGGCGTGCACTTCACCGAGGCGGCGAACAAGTTCGT GTTCGACCAGATCGCCGGCGGCAAGCTCTCCGACCCGCCGGTGCCTCTCAGGCAGGCCTG CCAGATCAGCAGAGGGCAGTGAATCGTCGCCGCCGGTGCGGGTGCATCGAGCCGTCGTCA GGTTGGCTGTGCCGTACTGCCATTTCTGCTGCTGCTGCTGCCTCTGGCTTTGTAAGTGTG CAATATTGCAGAGGCATATGGTTGATATAAAGTACATATACTGCTTCCTTTGTGCAATAA AGGGAGAATGAGATTCATAACGAGTAGCGATGAAATGCTTCTAGACAATCTGGAAGATGA CAATACGATTCTGAATCATCTTAAGTTTTGTTTAGACGCCGTTGCGCCGTAATGGCACGA TGTGAAGGCGTTATGCGCATGGTCTTGGACCTTTGGTTTTGTTAATGACGGTGTTTGCCG CCATGAAAGCCTCAAGCTCATCACTATGTTCTCCGGTGAGAAAAGAAGGTTAACGGGGAA TCTAAATAATTCTAAAAAATAATAAATATTTGAAAAGATTGAGTTCGACTCTCTATGGGA GCGATTTTTTCAGGATTTAACGGCTTTGTGCTTTTAGTGGTAGGCGACAACGAGACACCT GTGGTGATTTTGTCAATCTCCATAATTTGCCGGTCCAGTCTTCGAAAATACTCATAGGAG TAGGGTTTGCGTGCTTGCGTTCATATGAGTGAGTGTGCGTGCATTGTGAGTGTCTGCGTT GTACTGTGTAATTTTTAAAAATATATGTAAGTTCAAATATGAGTTCTATAAGTTTTAATT AAAAAAAGTCAAATTAAATTCTGACGAGTATGTATACATATTCACAGTTATATATATATT TTTTTGCTACAA ', 'CDS': ' >LOC_Os07g39750.1 ATGGCGCCTCCTCCGTACGCAGCCGCGGTGGTGGTGGCGACCGTCGCCGTGCTGGTGCTG GTGTCGCAGGTCTCAGTGGCCGCCGGCGCGGACTGCCGCTTCCCGGCCGTGTTCAACTTC GGCGACTCCAACTCCGACACGGGCGGGCTGTCGGCCACCTTCGGCGCCGCGCCGCCGCCC AACGGCAGGACCTTCTTCGGCATGCCCGTCGGCCGCTACTGCGACGGCCGCCTCGTCATC GACTTCATCGCTGAAAGCCTGGGACTGCCTTACCTCAGTGCGTACCTCAACTCGATAGGA AGTAACTTCACACAAGGTGCTAACTTTGCAACGGCCGGGTCGTCAATCAGAAGGCAGAAC ACATCTTTGTTCCTCTCTGGTTTCAGCCCCATTTCCTTGGACGTGCAGTCCTGGGAGTTT GAACAGTTCATCAACAGAAGCCAGTTCGTCTATAACAACAAAGGTGGAATCTACAGGGAG CTCCTACCCAAGGCTGAATACTTCTCTCAGGCGCTCTACACATTCGATATCGGCCAGAAT GACATTACCACAGGCTTCTTCATAAACATGACCTCTGAACAAGTCATAGCTTACATCCCT GATCTAATGGAAAGGCTCACGAACATAATCCAGAATGTGTACGGTCTCGGAGGAAGGTAC TTCTGGATTCACAACACGGGGCCGATCGGCTGCCTGCCTTACGCCATGGTGCACCGCCCC GACCTCGCCGTCGTCAAGGACGGGTCCGGCTGCTCCGTCGCCTACAACGAGGTCGCCCAG CTCTTCAACCAGAGGCTGAAGGAAACCGTGGGCCACCTCCGGAAGACCCACGCCGACGCC GCGTTCACCTACGTCGACGTCTACTCCGCCAAGTACAAGCTGATCAGCGACGCCAAGAAG CTCGGGATGGATGACCCGATGCTGACGTGCTGCGGCTACGGCGGCGGGAGGTACAACTTC GACGACAGGGTCGGGTGCGGCGGGAAGGTGAAGGTGAACGGGACGTGGGTGGTGGCGGGG AAGTCGTGCGACGACCCGCTGAAGCGGGTGAGCTGGGACGGCGTGCACTTCACCGAGGCG GCGAACAAGTTCGTGTTCGACCAGATCGCCGGCGGCAAGCTCTCCGACCCGCCGGTGCCT CTCAGGCAGGCCTGCCAGATCAGCAGAGGGCAGTGA ', 'Protein': ' >LOC_Os07g39750.1 MAPPPYAAAVVVATVAVLVLVSQVSVAAGADCRFPAVFNFGDSNSDTGGLSATFGAAPPP NGRTFFGMPVGRYCDGRLVIDFIAESLGLPYLSAYLNSIGSNFTQGANFATAGSSIRRQN TSLFLSGFSPISLDVQSWEFEQFINRSQFVYNNKGGIYRELLPKAEYFSQALYTFDIGQN DITTGFFINMTSEQVIAYIPDLMERLTNIIQNVYGLGGRYFWIHNTGPIGCLPYAMVHRP DLAVVKDGSGCSVAYNEVAQLFNQRLKETVGHLRKTHADAAFTYVDVYSAKYKLISDAKK LGMDDPMLTCCGYGGGRYNFDDRVGCGGKVKVNGTWVVAGKSCDDPLKRVSWDGVHFTEA ANKFVFDQIAGGKLSDPPVPLRQACQISRGQ* '}, 'ic4r': {'Anther_Normal': {'expression_value': '0.125978'}, 'Anther_WT': {'expression_value': '29.0952'}, 'Callus_Normal': {'expression_value': '5.55361'}, 'Leaf': {'expression_value': '0.254978'}, 'Leaf_35S:OSH1_-GR+DEX_24h_r1': {'expression_value': '26.1748'}, 'Leaf_35S:OSH1_-GR+DEX_24h_r2': {'expression_value': '16.9027'}, 'Leaf_35S:OSH1_-GR+DEX_3h_r1': {'expression_value': '16.4875'}, 'Leaf_35S:OSH1_-GR+DEX_3h_r2': {'expression_value': '21.161'}, 'Leaf_35S:OSH1_-GR+DEX_6h_r1': {'expression_value': '20.0055'}, 'Leaf_35S:OSH1_-GR+DEX_6h_r2': {'expression_value': '20.1391'}, 'Leaf_35S:OSH1_-GR+DEX_r1': {'expression_value': '15.5345'}, 'Leaf_35S:OSH1_-GR+DEX_r2': {'expression_value': '22.0694'}, 'Leaf_B8-12_r1': {'expression_value': '0.146956'}, 'Leaf_B8-12_r2': {'expression_value': '0.348109'}, 'Leaf_B8-12_r3': {'expression_value': '0.2844'}, 'Leaf_BLS256_r1': {'expression_value': '0.131066'}, 'Leaf_BLS256_r2': {'expression_value': '0.098418'}, 'Leaf_BLS256_r3': {'expression_value': '0.269863'}, 'Leaf_BLS279_r1': {'expression_value': '0.227909'}, 'Leaf_BLS279_r2': {'expression_value': '0.396622'}, 'Leaf_BLS279_r3': {'expression_value': '0.170805'}, 'Leaf_BXOR1_r1': {'expression_value': '0.171011'}, 'Leaf_BXOR1_r2': {'expression_value': '0.26028'}, 'Leaf_BXOR1_r3': {'expression_value': '0.07966'}, 'Leaf_CFBP2286_r1': {'expression_value': '0.233774'}, 'Leaf_CFBP2286_r2': {'expression_value': '0.438171'}, 'Leaf_CFBP2286_r3': {'expression_value': '0.333334'}, 'Leaf_CFBP7331_r1': {'expression_value': '0.510195'}, 'Leaf_CFBP7331_r2': {'expression_value': '0.275229'}, 'Leaf_CFBP7331_r3': {'expression_value': '0.417531'}, 'Leaf_CFBP7341_r1': {'expression_value': '0.25203'}, 'Leaf_CFBP7341_r2': {'expression_value': '0.075647'}, 'Leaf_CFBP7341_r3': {'expression_value': '0.177221'}, 'Leaf_CFBP7342_r3': {'expression_value': '0.390275'}, 'Leaf_CFBP7342_r4': {'expression_value': '0.192375'}, 'Leaf_CFBP7342_r5': {'expression_value': '0.471404'}, 'Leaf_L8_r1': {'expression_value': '0.665249'}, 'Leaf_L8_r2': {'expression_value': '0.248826'}, 'Leaf_L8_r3': {'expression_value': '0.43341'}, 'Leaf_Mock': {'expression_value': '0.857747'}, 'Leaf_Normal': {'expression_value': '0.518926'}, 'Leaf_Osbhlh148-DR_r1': {'expression_value': '0.960377'}, 'Leaf_Osbhlh148-DR_r2': {'expression_value': '0.468594'}, 'Leaf_Osbhlh148-WW_r1': {'expression_value': '2.02221'}, 'Leaf_Osbhlh148-WW_r2': {'expression_value': '2.50989'}, 'Leaf_Oshsfa2e-DR_r1': {'expression_value': '0.026376'}, 'Leaf_Oshsfa2e-DR_r2': {'expression_value': '0.394968'}, 'Leaf_Oshsfa2e-WW_r1': 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inflorescence': 'NA', '7 Sakai - endosperm': 'NA', '7 Sakai - leaf': '1', '7 Sakai - microgametophyte vegetative cell': 'NA', '7 Sakai - pistil': 'NA', '7 Sakai - plant egg cell': 'NA', '7 Sakai - plant embryo': 'NA', '7 Sakai - pollen sperm cell': 'NA', '7 Sakai - post-flowering panicle': '30', '7 Sakai - pre-flowering panicle': '13', '7 Sakai - root': '2', '7 Sakai - seed': '67', '7 Sakai - seed 10 days after pollination': 'NA', '7 Sakai - seed 5 days after pollination': 'NA', '7 Sakai - shoot': '14', '4 Zhang et al - anther': '1', '4 Zhang et al - callus': 'NA', '4 Zhang et al - carpel': '28', '4 Zhang et al - early inflorescence': 'NA', '4 Zhang et al - emerging inflorescence': 'NA', '4 Zhang et al - endosperm': 'NA', '4 Zhang et al - leaf': 'NA', '4 Zhang et al - microgametophyte vegetative cell': 'NA', '4 Zhang et al - pistil': 'NA', '4 Zhang et al - plant egg cell': 'NA', '4 Zhang et al - plant embryo': 'NA', '4 Zhang et al - pollen sperm cell': 'NA', '4 Zhang et al - post-flowering panicle': 'NA', '4 Zhang et al - pre-flowering panicle': 'NA', '4 Zhang et al - root': 'NA', '4 Zhang et al - seed': '15', '4 Zhang et al - seed 10 days after pollination': 'NA', '4 Zhang et al - seed 5 days after pollination': 'NA', '4 Zhang et al - shoot': '5', 'Anderson et al - anther': 'NA', 'Anderson et al - callus': 'NA', 'Anderson et al - carpel': 'NA', 'Anderson et al - early inflorescence': 'NA', 'Anderson et al - emerging inflorescence': 'NA', 'Anderson et al - endosperm': 'NA', 'Anderson et al - leaf': 'NA', 'Anderson et al - microgametophyte vegetative cell': '1', 'Anderson et al - pistil': 'NA', 'Anderson et al - plant egg cell': '26', 'Anderson et al - plant embryo': 'NA', 'Anderson et al - pollen sperm cell': '5', 'Anderson et al - post-flowering panicle': 'NA', 'Anderson et al - pre-flowering panicle': 'NA', 'Anderson et al - root': 'NA', 'Anderson et al - seed': 'NA', 'Anderson et al - seed 10 days after pollination': 'NA', 'Anderson et al - seed 5 days after pollination': 'NA', 'Anderson et al - shoot': 'NA'}, 'gwas_atlas': {'VarID': ['osa11276884', 'osa11276884', 'osa11276885', 'osa11276885', 'osa11276896', 'osa11276896', 'osa11276896', 'osa11276902', 'osa11276902', 'osa11276902', 'osa11276912', 'osa11276912', 'osa11276912', 'osa11276912'], 'Traits': ['grain length to width ratio', 'grain length', 'grain length to width ratio', 'grain length', 'grain length to width ratio', 'grain length', 'grain width', 'grain length to width ratio', 'grain length', 'grain width', 'grain length to width ratio', 'grain length', 'grain width', 'grain length to width ratio'], 'Species': ['Rice', 'Rice', 'Rice', 'Rice', 'Rice', 'Rice', 'Rice', 'Rice', 'Rice', 'Rice', 'Rice', 'Rice', 'Rice', 'Rice'], 'Position': ['chr7:23824969', 'chr7:23824969', 'chr7:23824986', 'chr7:23824986', 'chr7:23825206', 'chr7:23825206', 'chr7:23825206', 'chr7:23825270', 'chr7:23825270', 'chr7:23825270', 'chr7:23825476', 'chr7:23825476', 'chr7:23825476', 'chr7:23825476'], 'P-values': [5.04e-07, 0.000117, 1.37e-07, 3.18e-05, 1.1599999999999999e-07, 0.000105, 0.0008060000000000001, 1.4599999999999998e-07, 8.83e-05, 0.00041600000000000003, 3.4500000000000005e-08, 2.4299999999999998e-05, 0.00024300000000000002, 0.00026000000000000003], 'R2(%)': [18.77589, 7.687454, 19.59563, 8.151405, 19.97965, 7.869494, 10.25417, 19.95457, 7.832692999999999, 10.60829, 20.499129999999997, 8.788046000000001, 10.665189999999999, 12.82739], 'Mapped Gene(s)': ['Os07g0586400 Os07g0586332 Os07g0586200 Os07g0586266 ', 'Os07g0586400 Os07g0586332 Os07g0586200 Os07g0586266 ', 'Os07g0586400 Os07g0586332 Os07g0586200 Os07g0586266 ', 'Os07g0586400 Os07g0586332 Os07g0586200 Os07g0586266 ', 'Os07g0586400 Os07g0586332 Os07g0586200 Os07g0586266 ', 'Os07g0586400 Os07g0586332 Os07g0586200 Os07g0586266 ', 'Os07g0586400 Os07g0586332 Os07g0586200 Os07g0586266 ', 'Os07g0586400 Os07g0586332 Os07g0586200 Os07g0586266 ', 'Os07g0586400 Os07g0586332 Os07g0586200 Os07g0586266 ', 'Os07g0586400 Os07g0586332 Os07g0586200 Os07g0586266 ', 'Os07g0586400 Os07g0586332 Os07g0586200 Os07g0586266 ', 'Os07g0586400 Os07g0586332 Os07g0586200 Os07g0586266 ', 'Os07g0586400 Os07g0586332 Os07g0586200 Os07g0586266 ', 'Os07g0586400 Os07g0586332 Os07g0586200 Os07g0586266 '], 'Consequence Type(s)': ['upstream_gene_variant synonymous_variant upstream_gene_variant downstream_gene_variant ', 'upstream_gene_variant synonymous_variant upstream_gene_variant downstream_gene_variant ', 'upstream_gene_variant missense_variant upstream_gene_variant downstream_gene_variant ', 'upstream_gene_variant missense_variant upstream_gene_variant downstream_gene_variant ', 'upstream_gene_variant synonymous_variant upstream_gene_variant downstream_gene_variant ', 'upstream_gene_variant synonymous_variant upstream_gene_variant downstream_gene_variant ', 'upstream_gene_variant synonymous_variant upstream_gene_variant downstream_gene_variant ', 'upstream_gene_variant start_lost upstream_gene_variant downstream_gene_variant ', 'upstream_gene_variant start_lost upstream_gene_variant downstream_gene_variant ', 'upstream_gene_variant start_lost upstream_gene_variant downstream_gene_variant ', 'upstream_gene_variant upstream_gene_variant upstream_gene_variant downstream_gene_variant ', 'upstream_gene_variant upstream_gene_variant upstream_gene_variant downstream_gene_variant ', 'upstream_gene_variant upstream_gene_variant upstream_gene_variant downstream_gene_variant ', 'upstream_gene_variant upstream_gene_variant upstream_gene_variant downstream_gene_variant '], 'PMID': [25785447, 25785447, 25785447, 25785447, 25785447, 25785447, 25785447, 25785447, 25785447, 25785447, 25785447, 25785447, 25785447, 25785447]}}, 'OsNippo01g010050': {'rapdb': {'Transcript_ID': 'Os01t0100100-01', 'Locus_ID': 'Os01g0100100', 'Description': 'RabGAP/TBC domain containing protein.', 'GO': 'Molecular Function: Rab GTPase activator activity (GO:0005097), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of Rab GTPase activity (GO:0032313)', 'InterPro': 'RabGAP/TBC (IPR000195)', 'Transcript evidence': 'AK242339 (DDBJ, antisense transcript)', 'ORF evidence': 'Q655M0 (UniProt)', 'FLcDNA clone ID': 'J075199P03'}, 'gramene': {'_id': 'Os01g0100100', 'name': 'Os01g0100100', 'description': 'RabGAP/TBC domain containing protein. (Os01t0100100-01)', 'biotype': 'protein_coding', 'taxon_id': 39947, 'system_name': 'oryza_sativa', 'db_type': 'core', 'gene_idx': 0, 'location': {'region': '1', 'start': 2983, 'end': 10815, 'strand': 1, 'map': 'GCA_001433935.1'}, 'xrefs': [{'db': 'UniParc', 'ids': ['UPI0001C7F089']}, {'db': 'Uniprot/SPTREMBL', 'ids': ['A0A0P0UX28']}, {'db': 'STRING', 'ids': ['39947.LOC_Os01g01010.1']}, {'db': 'RefSeq_peptide', 'ids': ['XP_015622096.1']}, {'db': 'protein_id', 'ids': ['BAS69908.1']}, {'db': 'RefSeq_dna', 'ids': ['XM_015766610.1', 'XM_015766610.2']}, {'db': 'EntrezGene', 'ids': ['4326813']}], 'gene_structure': {'exons': [{'id': 'Os01t0100100-01.exon1', 'start': 1, 'end': 286}, {'id': 'Os01t0100100-01.exon2', 'start': 372, 'end': 634}, {'id': 'Os01t0100100-01.exon3', 'start': 1375, 'end': 1473}, {'id': 'Os01t0100100-01.exon4', 'start': 2475, 'end': 2578}, {'id': 'Os01t0100100-01.exon5', 'start': 4154, 'end': 4962}, {'id': 'Os01t0100100-01.exon6', 'start': 5046, 'end': 5168}, {'id': 'Os01t0100100-01.exon7', 'start': 5250, 'end': 5338}, {'id': 'Os01t0100100-01.exon8', 'start': 5426, 'end': 5626}, {'id': 'Os01t0100100-01.exon9', 'start': 6228, 'end': 6633}, {'id': 'Os01t0100100-01.exon10', 'start': 7120, 'end': 7205}, {'id': 'Os01t0100100-01.exon11', 'start': 7292, 'end': 7448}, {'id': 'Os01t0100100-01.exon12', 'start': 7522, 'end': 7833}], 'transcripts': [{'exons': ['Os01t0100100-01.exon1', 'Os01t0100100-01.exon2', 'Os01t0100100-01.exon3', 'Os01t0100100-01.exon4', 'Os01t0100100-01.exon5', 'Os01t0100100-01.exon6', 'Os01t0100100-01.exon7', 'Os01t0100100-01.exon8', 'Os01t0100100-01.exon9', 'Os01t0100100-01.exon10', 'Os01t0100100-01.exon11', 'Os01t0100100-01.exon12'], 'length': 2935, 'exon_junctions': [286, 549, 648, 752, 1561, 1684, 1773, 1974, 2380, 2466, 2623], 'cds': {'start': 382, 'end': 2490}, 'translation': {'id': 'Os01t0100100-01', 'length': 702, 'features': {'domain': {'entries': [{'name': 'PF00566', 'description': 'RabGAP-TBC', 'db': 'Pfam', 'interpro': 'IPR000195', 'start': 389, 'end': 535}, {'name': 'PS50086', 'description': 'TBC_RABGAP', 'db': 'Prosite_profiles', 'interpro': 'IPR000195', 'start': 90, 'end': 537}, {'name': 'SM00164', 'description': 'tbc_4', 'db': 'Smart', 'interpro': 'IPR000195', 'start': 87, 'end': 558}], 'architecture': [{'root': '195', 'start': 87, 'end': 558, 'interpro': 'IPR000195', 'name': 'Rab-GTPase-TBC_dom', 'description': 'Rab-GTPase-TBC domain'}], 'roots': '195'}, 'homologous_superfamily': {'entries': [{'name': 'SSF47923', 'description': 'Ypt/Rab-GAP domain of gyp1p', 'db': 'SuperFamily', 'interpro': 'IPR035969', 'start': 65, 'end': 497}, {'name': 'SSF47923', 'description': 'Ypt/Rab-GAP domain of gyp1p', 'db': 'SuperFamily', 'interpro': 'IPR035969', 'start': 473, 'end': 692}]}}}, 'id': 'Os01t0100100-01'}], 'canonical_transcript': 'Os01t0100100-01'}, 'annotations': {'domains': {'entries': [{'id': 'IPR000195', 'name': 'Rab-GTPase-TBC_dom', 'description': 'Rab-GTPase-TBC domain'}, {'id': 'IPR035969', 'name': 'Rab-GTPase_TBC_sf', 'description': 'Rab-GTPase-TBC domain superfamily'}]}, 'GO': {'entries': [{'id': 'GO:0090630', 'name': 'activation of GTPase activity', 'namespace': 'biological_process', 'def': 'Any process that initiates the activity of an inactive GTPase through the replacement of GDP by GTP.', 'subset': None, 'evidence_code': 'IBA'}, {'id': 'GO:0017137', 'name': 'Rab GTPase binding', 'namespace': 'molecular_function', 'def': 'Interacting selectively and non-covalently with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases.', 'subset': None, 'evidence_code': 'IBA'}, {'id': 'GO:0006886', 'name': 'intracellular protein transport', 'namespace': 'biological_process', 'def': 'The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.', 'subset': None, 'evidence_code': 'IBA'}, {'id': 'GO:0005622', 'name': 'intracellular', 'namespace': 'cellular_component', 'def': 'The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.', 'subset': ['gocheck_do_not_annotate', 'goslim_chembl', 'goslim_generic', 'goslim_metagenomics', 'goslim_plant'], 'evidence_code': 'IEA'}, {'id': 'GO:0005096', 'name': 'GTPase activator activity', 'namespace': 'molecular_function', 'def': 'Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP.', 'subset': None, 'evidence_code': 'IBA'}, {'id': 'GO:0031338', 'name': 'regulation of vesicle fusion', 'namespace': 'biological_process', 'def': 'Any process that modulates the frequency, rate or extent of vesicle fusion.', 'subset': None, 'evidence_code': 'IBA'}, {'id': 'GO:0012505', 'name': 'endomembrane system', 'namespace': 'cellular_component', 'def': 'A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles.', 'subset': ['goslim_aspergillus', 'goslim_candida', 'goslim_flybase_ribbon', 'goslim_yeast'], 'evidence_code': 'IBA'}], 'ancestors': [3674, 5488, 5515, 5575, 5623, 6810, 8047, 8104, 8150, 15031, 15833, 17016, 19899, 30234, 30695, 31267, 32879, 33036, 33043, 34613, 42886, 43085, 43087, 43547, 44093, 44464, 45184, 46907, 50789, 50790, 50794, 51020, 51049, 51128, 51179, 51234, 51336, 51345, 51641, 51649, 60589, 60627, 65007, 65009, 70727, 71702, 71705, 98772]}, 'taxonomy': {'entries': [{'_id': 39947, 'name': 'Oryza sativa Japonica Group'}], 'ancestors': [1, 2759, 3193, 3398, 4447, 4479, 4527, 4530, 4734, 33090, 35493, 38820, 58023, 58024, 78536, 131221, 131567, 147367, 147380, 359160, 1437183, 1437197, 1648021]}, 'familyRoot': {'entries': [{'_id': 3193, 'name': 'Embryophyta'}], 'ancestors': [1, 2759, 33090, 35493, 131221, 131567]}}, 'homology': {'gene_tree': {'id': 'EPlGT00940000167767', 'root_taxon_id': 3193, 'root_taxon_name': 'Embryophyta', 'duplications': [29730], 'representative': {'model': {'id': 'Os01g0100100', 'taxon_id': 39947, 'description': 'RabGAP/TBC domain containing protein. (Os01t0100100-01)'}}}, 'homologous_genes': {'ortholog_one2one': ['BGIOSGA002569', 'OBART01G00010', 'KN541486.1_FG001', 'ORUFI01G00040', 'OPUNC01G00010', 'OB01G10010', 'TraesCS3A02G087000', 'TraesCS3D02G087200', 'TRIDC3BG014290', 'BRADI_1g74660v3', 'AET3Gv20188500', 'TRIDC3AG010530', 'TraesCS3B02G102400', 'HORVU3Hr1G015620', 'Zm00001d040234', 'SETIT_000493mg', 'SORBI_3003G110000', 'Dr08979', 'BVRB_3g057880', 'vigra.VC1973A.gnm6.ann1.Vradi0332s00250', 'LR48_Vigan05g203300', 'Tp57577_TGAC_v2_gene6502', 'Solyc03g058470.2', 'CCACVL1_07405', 'TCM_019958', 'HannXRQ_Chr03g0089131', 'Csa_4G010920', 'TRIUR3_26699', 'PRUPE_1G200000', 'TanjilG_30035', 'DCAR_029914', 'MTR_2g099185', 'PHAVU_005G155000g', 'AMTR_s00066p00146980', 'Pp3c1_2510'], 'syntenic_ortholog_one2one': ['ONIVA01G00100', 'OGLUM01G00020'], 'ortholog_one2many': ['GSMUA_Achr9G08200_001', 'GSMUA_Achr6G28710_001', 'B456_005G126100', 'Bo4g194370', 'GSBRNA2T00002271001', 'scaffold_403239.1', 'Bra007460', 'B456_011G138800', 'fgenesh2_kg.5__2415__AT3G59570.1', 'GSBRNA2T00121831001', 'GLYMA_15G028000', 'GSBRNA2T00021969001', 'VIT_00s0226g00020', 'AT3G59570', 'POPTR_017G023200v3', 'POPTR_017G022800v3', 'Bo8g094330', 'MANES_04G048100', 'GSBRNA2T00132657001', 'GLYMA_13G346200', 'POPTR_007G132900v3', 'Bo4g019830', 'VIT_00s0226g00160', 'Bra004766', 'AT2G43490', 'g18015', 'Bra037712', 'MANES_11G126700', 'g22846', 'GSBRNA2T00045107001', 'GSBRNA2T00155637001', 'VIT_00s0914g00010', 'SELMODRAFT_451481', 'SELMODRAFT_442016', 'SELMODRAFT_416728']}}, 'bins': {'fixed_100': 3304, 'fixed_200': 6604, 'fixed_500': 16504, 'fixed_1000': 33006, 'uniform_1Mb': 31952, 'uniform_2Mb': 16095, 'uniform_5Mb': 6596, 'uniform_10Mb': 3411}, 'species_idx': 5}, 'msu': {'Genomic Sequence': ' >LOC_Os01g01010 AGATGAGCTGGTGGGGATGCTCTAAGAGAACGAGAGAAGCACAGAGCAGATAAACCACAC CCACAGGCACCACCGTCCTTGTTGGTAATGAAGAAGACGAGACGACGACTTCCCCACTAG GAAACACGACGGAGGCGGAGATGATCGACGGCGGAGAGAGCTACAGAAACATCGATGCCT CCTGTCCAATCCCCCCATCCCATTCGGTAGTTGGATTGAAGACTACCGAATAAGAGAAGC AGGCAGGCAGACAAACCCTTGAACCAAGGAGTCCTCGCTGAGGAAGCTTTGGATCCACGA CGCAGCTATGGCCTCCCCGCCCACCAGGCCGCCAGCCACAACCAGCTGACTAGGTAGGCT TCCTAGGTAGGGATCCCATCCCTTCGATTCCCTACTCCCTCCCCCGATTGATTTGATTTG ATTTGATTTAATTCGATTGCCTGCTTTTCAGGTCGCATGCATCATCAGATTTCAATCTCC CTTCGTTCCCTGTCCCTAATCCAATACCAATAGGGAGCAATCAGCTGCTCCTCGACGGCG AGGGAGATGTCGTCGGCCGCGGGCCAAGACAACGGAGATACCGCTGGGGACTACATCAAG TGGATGTGCGGCGCCGGTGGCCGTGCGGGCGGCGCCATGGCCAACCTCCAGCGCGGCGTT GGCTCCCTCGTCCGTGACATTGGCGACCCCTGCCTCAACCCATCCCCCGTTAAGGTTCGC CTACTCCTACTCTAGCTCCATATGGATATGGATTCGATTAGCTGTCTACATTCTATGCCA TCAATTTGTTTTCCATCACTTCTCATTATACATCTCCATTGCTCTCTAAATTAAGGCTTC TCTAGCTCTATCCTATATATATACTAGTACTCCGTATATGATTCTGCTTCATCACTTATT TATTCATCATCATACCGTGAAGCTGTATAAGTCCTGTTATTTGTCATTTGGCATATGTTG TATAGATAACACTTTCAGCCCAGGGACTTTCTATTGCCACTTTTATACATATACAATCAA CATTTAGCATATGTATATCCTGTACCGCTCAGTTGTACTGCTGCTTTGAAGATAATGTTT GCAAAACATATGAGCTCACACACGAGGCTAGATGCTGCATAGGCTGCACAATGGGGTAGC CATTTTGATACTTCTTAATGCTATTTATGCTGGTCCAAATGTTCATTGGTAGCCTCAGGC AGAGAATTTTAGGGAGATATTATGTCAAACTCCCTGGATTCACTATGATTATACAATATT ACCCATTCAATCCATTCAAATAAATTTCCAGGTCAACTCACATATTGTACTGAAAGAAGA CTAATTTGCACTAATCATATCCTTTTATCCACCAGAGTATATGAGATTGTCTTCTATATG CAATTTACTTCATATCGACATTTTTCTGCAGAATTGCAAAACTGACGCCTTGTTTTCCAT CTGGAATTGTGCAGGGGAGCAAAATGCTCAAACCGGAAAAATGGCACACATGTTTTGATA ATGATGGAAAGGTCATAGGTTTCCGTAAAGCCCTAAAATTCATTGTCTTAGGGGTGAGTT AATTGTTTCTTTTGTGCTTCAAAAACTTGTTTTTTCATGTATTTTAGCTGTTGAAGGGTG TGGATTTTTTTTTCAGTCTTAATACATTACCTTTTAGAGCATGATGCCCCACGCGCCATT TGTGAATGTGTAAAATAGGGAAGATCAAATAGAACGTGACAACTGTTTATTTTATTACCA TGATCATTGTTCTCTTTGAGAGTGTCTGCTTTGGAAATTTCAAAGAAATTAATGCATATG ATTGCGTAGCTCTAGTTTTTCTTAAAAAAATAAGCGGCTAGGCTCTTTATACTATTATGT CACAGAGTGTTTGCCTTTTACCTGTGTATGTAGCTAGGCATAAACATTTGTTTGTGGGTA AATACAAAAAAAAATCCAATGTGTAGAAACTGCTTATAAATACATAAAAGTTACATAAAT ACATAACTGCTTCAAATAAGCAAGATTTGAACATACCTTCACATAAGCTTTCCCCTAACT GAAAAGCCATTTGGTATAACCTTATAGAAATTAGATATAGTGGAGATGTGGAATGAGCTG CTATCAAGTCTTGTTTCGTGAAAGCAAACTGACACGGTCTCCACAGCAAACACGTCCACA GCTTTGCAATTAGTATCTTTATAGGAAGGTCAATCAGAGTTCATTGGCCATATCTTGGAA AAAAAAGGCATCAGATTTTAGTTTAATTATGTCTATATTTTAGGCATGGATTATTGATCA TTTTTGCAGCAGACTAAGTTTAATGCATGTAGTTATTTTCCTTGATTAGTGATTAGTGTT GTTATTTTCTATACACCACTGGCACTGATAGATGTGCTCCATGCTTTGCAATGCATCAAA ATTATCATATCGTGCCTAACTCATGCTTTGCACAGATATCATTTTTTTGTGTTCTGGCAC TATCTAAAGAATTGTCTATAAACTAGGAACAATAAGATCGCATCGTACTATTCTTCACAT TAAAACATTTCTTACCCCCAAAATTGATGTGCAGGGTGTGGATCCCACTATTCGAGCTGA AGTTTGGGAATTTCTTCTTGGCTGCTATGCCTTGAGTAGTACCTCAGAGTATAGGAGGAA ACTAAGAGCTGTTAGAAGGTTTGACACTTTCCTGTTTTCAGTACCAGGATACCTTTTTTG TACAAGCATAAGACCGTAAGAGCATAAATGAATTGCATTTATTATCTAGAATAAAATCAT GAATGTTACAGTTATGTAGTACTCCCTCCATTCCAATATATAAGGATTTCAAGGATTCAA ATTTTGTACCACAATATAAGGATTTCTGCACTGATTCCCATAATACCCATCATTTCAGTG ATTCCCAAACCAATCAAATGCATAGAAAGGGAAAAGAATCTTTTGACCTAACCTTGGTAT TGGCTAAACAACCTAGAAATCTTTATATTTTGGAAAGGAGGGAGTAGGTATTAATTTGTT TGTTTTTTGTTTATTGTACTAAAACTGAACTTCTAGGTAAATATTCCTATCCTTTACATT TTCCTTGTGTTATTTATAACCATGTGTGCAGAATGGAAAATGATATTAAAAGTTTAAAAC AAATGTGTTGCTATGTTTATCTGGAGTACCAATCTCAATCTTTTTCAGGCACTCAAAGTA ACTTGATTAGGGTTTAGGGTTTACCCCTTTTCATTGTGCTACCTCCTATACACATTGTTG GGGGGATGAATTGGTGGCATCAGTACTCATAGTTTGTCTATGTAACATCTACTTGTGCTG ATGTTGTATGATCCATTTGGTTTAGATGGCTTGATAAGTACCCCGTGCCTGCACACAACA ATATGACAGATTATATCAATACATCTAGGGTAGAGGTAAATGAAAGACTGAGATTCTAGA TATTGCATACAATTCCTAGGTATTTGTGGTCATGGCCTGTGGGTGATATCGGGTTGGATA TGATCCACCAAACCTGGAGCAGAAAATTTCTAAGACTAGTTGCCAGAATAGAATTCTCTT GGAAATTTAACAGTTCCAAACAGCCTGTTCACAAACCCATTATCCATTCACTAGCAGGTG CTGGACAGAAAATATGTTGTTCATAGGGGTTTGAACCTGGGACATTAAATTCTGTAGTAC GTGGTAGCCAACAGTGCCAATGGCTCTTTCTTTGTAATGGAAGGATGCGTATTAAAGAAA TTAAGTAGATGGGTTGGCATTGCACACTAATTAGTAATGCAAATATACCTTAGTTTATTG TGATCTCTGTAATTATAATTGCATATTTATATTCCTTTTTATGTCTAACTATCGAAGCGT ACCTGTGCTATTACAGATAAACTTATTACGTCATATGTTCATGTTGAATTGATTGGCGTG CGATTAGTCCTTTCTGTTTGCATCTGCTTGTTTTATTCACTTGTGACCAACAAATTTATA ACCAACATCATGTATGCCATCCATACCAATTGTTGTGCGAGAAATTCTACGTTTTGCCTT TGTTACCGATTCTACTAATTGTTGCTGATGAATGCGAATTCCGTGAAATGCCATCGCACA AGTGTTTTTATTCCTTTGTTTCCATTTCTACGGAGCAGGGCAATCAGTACAGTTCTGAAA TTCTTGCTGAGTGTTCTTTCTTTTGAAAGTTTTTACACCTGTGGGACAATTATGGAAGCC TGTAACCTCGTTTATTTCTTCGCTTCTATGCAGGGAAAAATATCAAATTTTAGTTAGACA GTGCCAGAGCATGCACCCAAGCATTGGTACAGGTGAGCTTGCTTACGCTGTTGGATCAAA GCTAATGGATGTCAGGACTATGTCAAAAGAAACCCACATTGCAGAAGAAGTTAGCACAAG TCAACAAACTTCACAAAATACAGCTGGCAGTTTAGTAGAAGATTCAGATTATGGCCCCGG TGGTGCACAGCAGTCACAAAAAAGGGAAAGCTGTAGTAAATCAGCTGAACTAGTTGGTTT CAACGTACATAATGATACCTCTCTTTATGATTCTTCCAATTTTATTGTGTCTTCTACAGA AGTGAATAATTGCTCAAAAGATTCTCAGGATTACAATGACATGGGTGAACCAAGATATGA CACTGAGACCTTCGATGATTATCCTTCTCTACCTGTTACAAATTTTTTCTCAACTGATGG TGTGGGCAGCAATGGAGTTGATAAAAATCATTGTAGTTTCTCAGTTCCTGAAGATAGATT AAGGCACCGTGATGAACGTATGCACAGCTTCCAAATCAATAATAACATAGATCTCATTAT AGAGTCAAATTCATGCTCCAGTGATGTGTTTAGGGCTAGCAACAGTGATTCAGCCATCTT TCACTCAGATGCATACAAGCAGGATAGATGGTTAGATGATAATGGCTATAACAGGGAAGT TATAGATTCCTTGAGGATATCTGATGCACCAGAAGCAGATTTTGTTGATGGAACCAAATC CAACAGTGTGGTTGCCAGCAAAGATCGAGTCTCTGAATGGCTTTGGACACTGCACCGAAT TGGTATGCTCTATTTTTTCTTCACTTCATCATGCAATTACAGTGGTATCTTGTGATTATG TTCTAATTTGCAAAACCTATTACAGTGGTTGATGTGGTTAGAACGGATAGTCATCTTGAT TTCTATGGAGAATCAAGAAATATGGCTAGGATGTCAGATATACTTGCAGTTTATGCATGG GTTGATCCTTCCACCGGGTATTGCCAAGGTATATGCATATTTCAGTGGCATCTTTTTTTA CTTCCTTTTTGGTTTCTTGATGTGTCTAAATGGGATAAGTTGCTAACAGGTATGAGTGAT CTACTTTCACCTTTTGTTGTTCTCTATGAGGATGATGCAGATGCCTTTTGGTGCTTTGAG ATGCTACTGAGAAGGATGGTAATTCACATATATTTCAAATTTTGTTGCCTATTAGTTTGG TTTCTATGTTACTCCATGCATAATATGTGCCCTGTTCCACTTCAGCGTGAAAATTTCCAG ATGGAGGGACCAACAGGAGTTATGAAGCAGTTGCAAGCATTGTGGAAGATCATGGAAATA ACTGATGTAGAATTATTTGAACATTTGTCAACAATTGGTGCTGAAAGCCTTCATTTTGCT TTCCGGATGCTGCTAGTGCTTTTTCGTCGAGAGCTGTCCTTTGAGGAGTCACTTAGCATG TGGGAGGTGTGGCATTTGAAGACACATGTATTATCTTTTTTCAGTTGTTGTTCTTCGTAG GAAAGCTCTAATGGATGTTTGTTTGTCAGCTGGTGTAGGTCTAGGGGATGTTGGTTAAGC CTTTTTTATTTCAAAAATTGTATTACTAGTTAAATATTTCAAATAGTAAAATAGGGTACA TCTTCGATTTAGGTTCAAAATCATCAGAGGTGTAGGTAGATGGTTCATTACGATTGTAGT TAATGTTTGTGATATCATGTGGCATGTGAACTTTATACTCCCTCGGGTCACAAATATTTG ACGTTTAGGACAAGATGTGGTCAAACTTTTAAAATTTTGACCGTCAATAACAGCTCAAAT GCGTAGCTTATAAAAACACAAAAAAAGATATGCGGAGATTTGCCTTGCAAGGTATTAGTG TCATAATATGATACACTTATTAGATTTTATAGTCTTATTCTGATATAAAATTGATGGTCA GTTTCAAAAGTTTTGACCAAATCTTGTTCTAAACATCAAATATTTATGATCGGAGGGAAC ATTACTTATAAAATGCTCTTCACACTGCAGTCTTGATCTGTTAACCAACCGTGCTTCTTG CTTTCAGATGATGTGGGCTGCTGACTTTAATGAAGATGTGATTTTACATTTGGAAGAGAA TTGTCTGGAGCCATTGCTGGTAGATATGAGGAATGATTTATCATGTGAGGTGAAAGAAGA GCACCGGGTGAACAGTTACACAAGAAGAAAGTCCAAAAGCAGGAAGCCCCATCATAGAAA TGGTGAAATGCGTGTAGCTTGCAACCTTGGAATGAAACCCAATACAAGAAATCCCCTCTG TGGCTTGTCAGGAGCTACTATTTGGGCAAGACATCAGCAGATGCCACATATAAGCACAAA TGTGTTAGCAAAGAATGGAGATGATGATCTGCCTATATTCTGCGTAGCAGCAATCCTTGT AATCAATCGCCACAAGATAATTAGAGAAACTCGCTCAATAGATGATGCAATCAAGGCAAG TTTAAGTCACAACTTCCTTTCATATTGTTTACAAACCTCGGATCCATGAAATTACTACCA AGAGTTACCTATATTTGCATTAGATTTTGTGGAATTCATTTTAGGCAAAATTAAAAATTT GCTCAGACAGTACAATAACATGTTATGGCCGATCATTTCTGCATAAATGACTATTGATTT TGTCCTCTGCTGAATTGATGGGTTTAATTAGAGGATGCTTATTTCATTCTGATAACTATC AATATTTACAAGTTACGGCAACTGCTAATTAAAAATGATGCCCAGCCTTTCTCCCTCTTG GAAAAAAAGATGGGTAAACCTGTATATAGTGGTGATATTGACTCTGCTGAGCAGTCTTCC ACTTAAATGGGAAGAGTTAAGGAAAGTATAGTCAGGTTTACTTATAATGCAACTTATTGG CATATTAATGCATGTTTATTGTTTGCACTCCTGAAGTTGAGTTGGTCAATTTTTTCCATA GATGTTCAATGATAATATGCTGAAGATCAATGTAAAAAGATGCGTACGCATGGCTATCAA GCTGAGGAAGAAGTATATTTACAAGGTAAATTGTGATAAGCATACATGAGCACCATCCAT GTTTTTCAGGTATATTTACAAGGTAAGTTCTAATTTGGTCTTGGGATACAGTTATTGAAG GGGGGCTCGGAATGATGAAAAAGTGGAAACTGAAGTTGAGAAATCGCCCTGGGGAACTAG ATGTTTTTCAACCATGAACTTCTCGTAATTATGGGTGATGGAACTTTATATATTCATTAG AAGTCCAAAAAAAATCCGTATACTCACGGTATGGATTCCCTCTTTCTGTTTATGTTTTGT TAGAGATGGATGACGTACATAATCTGCTTGTCTTGTTTCAGGGAATCTGTACATATGCAC AGTATACTTGAAAACAAGAGACGAAGCGGTGGAAGGATAATAGAGAAGACCGCCATGTTG GTGTAGCATCGATCGATGTTGTCATTGTTTTTGTGGTGCCAGCCCATCTGCCTTGGCACT TTCCGTGGTGATTTCTGATAAAAGTGGAGTACTAGTTGTTTTTTCTTTTTGCCAAACAAT TTGCGTCAGCTATTGGTGGAGAGAGAAGGAATGAATGAGGAATGTGTATAAAGCACTAGT GGTAATCACGCAGTCGTTTCAATACAGAACAGTAAAAAATGGAGGAATTCTGCCA ', 'CDS': ' >LOC_Os01g01010.1 ATGTCGTCGGCCGCGGGCCAAGACAACGGAGATACCGCTGGGGACTACATCAAGTGGATG TGCGGCGCCGGTGGCCGTGCGGGCGGCGCCATGGCCAACCTCCAGCGCGGCGTTGGCTCC CTCGTCCGTGACATTGGCGACCCCTGCCTCAACCCATCCCCCGTTAAGGGGAGCAAAATG CTCAAACCGGAAAAATGGCACACATGTTTTGATAATGATGGAAAGGTCATAGGTTTCCGT AAAGCCCTAAAATTCATTGTCTTAGGGGGTGTGGATCCCACTATTCGAGCTGAAGTTTGG GAATTTCTTCTTGGCTGCTATGCCTTGAGTAGTACCTCAGAGTATAGGAGGAAACTAAGA GCTGTTAGAAGGGAAAAATATCAAATTTTAGTTAGACAGTGCCAGAGCATGCACCCAAGC ATTGGTACAGGTGAGCTTGCTTACGCTGTTGGATCAAAGCTAATGGATGTCAGGACTATG TCAAAAGAAACCCACATTGCAGAAGAAGTTAGCACAAGTCAACAAACTTCACAAAATACA GCTGGCAGTTTAGTAGAAGATTCAGATTATGGCCCCGGTGGTGCACAGCAGTCACAAAAA AGGGAAAGCTGTAGTAAATCAGCTGAACTAGTTGGTTTCAACGTACATAATGATACCTCT CTTTATGATTCTTCCAATTTTATTGTGTCTTCTACAGAAGTGAATAATTGCTCAAAAGAT TCTCAGGATTACAATGACATGGGTGAACCAAGATATGACACTGAGACCTTCGATGATTAT CCTTCTCTACCTGTTACAAATTTTTTCTCAACTGATGGTGTGGGCAGCAATGGAGTTGAT AAAAATCATTGTAGTTTCTCAGTTCCTGAAGATAGATTAAGGCACCGTGATGAACGTATG CACAGCTTCCAAATCAATAATAACATAGATCTCATTATAGAGTCAAATTCATGCTCCAGT GATGTGTTTAGGGCTAGCAACAGTGATTCAGCCATCTTTCACTCAGATGCATACAAGCAG GATAGATGGTTAGATGATAATGGCTATAACAGGGAAGTTATAGATTCCTTGAGGATATCT GATGCACCAGAAGCAGATTTTGTTGATGGAACCAAATCCAACAGTGTGGTTGCCAGCAAA GATCGAGTCTCTGAATGGCTTTGGACACTGCACCGAATTGTGGTTGATGTGGTTAGAACG GATAGTCATCTTGATTTCTATGGAGAATCAAGAAATATGGCTAGGATGTCAGATATACTT GCAGTTTATGCATGGGTTGATCCTTCCACCGGGTATTGCCAAGGTATGAGTGATCTACTT TCACCTTTTGTTGTTCTCTATGAGGATGATGCAGATGCCTTTTGGTGCTTTGAGATGCTA CTGAGAAGGATGCGTGAAAATTTCCAGATGGAGGGACCAACAGGAGTTATGAAGCAGTTG CAAGCATTGTGGAAGATCATGGAAATAACTGATGTAGAATTATTTGAACATTTGTCAACA ATTGGTGCTGAAAGCCTTCATTTTGCTTTCCGGATGCTGCTAGTGCTTTTTCGTCGAGAG CTGTCCTTTGAGGAGTCACTTAGCATGTGGGAGATGATGTGGGCTGCTGACTTTAATGAA GATGTGATTTTACATTTGGAAGAGAATTGTCTGGAGCCATTGCTGGTAGATATGAGGAAT GATTTATCATGTGAGGTGAAAGAAGAGCACCGGGTGAACAGTTACACAAGAAGAAAGTCC AAAAGCAGGAAGCCCCATCATAGAAATGGTGAAATGCGTGTAGCTTGCAACCTTGGAATG AAACCCAATACAAGAAATCCCCTCTGTGGCTTGTCAGGAGCTACTATTTGGGCAAGACAT CAGCAGATGCCACATATAAGCACAAATGTGTTAGCAAAGAATGGAGATGATGATCTGCCT ATATTCTGCGTAGCAGCAATCCTTGTAATCAATCGCCACAAGATAATTAGAGAAACTCGC TCAATAGATGATGCAATCAAGATGTTCAATGATAATATGCTGAAGATCAATGTAAAAAGA TGCGTACGCATGGCTATCAAGCTGAGGAAGAAGTATATTTACAAGTTATTGAAGGGGGGC TCGGAATGA ', 'Protein': ' >LOC_Os01g01010.1 MSSAAGQDNGDTAGDYIKWMCGAGGRAGGAMANLQRGVGSLVRDIGDPCLNPSPVKGSKM LKPEKWHTCFDNDGKVIGFRKALKFIVLGGVDPTIRAEVWEFLLGCYALSSTSEYRRKLR AVRREKYQILVRQCQSMHPSIGTGELAYAVGSKLMDVRTMSKETHIAEEVSTSQQTSQNT AGSLVEDSDYGPGGAQQSQKRESCSKSAELVGFNVHNDTSLYDSSNFIVSSTEVNNCSKD SQDYNDMGEPRYDTETFDDYPSLPVTNFFSTDGVGSNGVDKNHCSFSVPEDRLRHRDERM HSFQINNNIDLIIESNSCSSDVFRASNSDSAIFHSDAYKQDRWLDDNGYNREVIDSLRIS DAPEADFVDGTKSNSVVASKDRVSEWLWTLHRIVVDVVRTDSHLDFYGESRNMARMSDIL AVYAWVDPSTGYCQGMSDLLSPFVVLYEDDADAFWCFEMLLRRMRENFQMEGPTGVMKQL QALWKIMEITDVELFEHLSTIGAESLHFAFRMLLVLFRRELSFEESLSMWEMMWAADFNE DVILHLEENCLEPLLVDMRNDLSCEVKEEHRVNSYTRRKSKSRKPHHRNGEMRVACNLGM KPNTRNPLCGLSGATIWARHQQMPHISTNVLAKNGDDDLPIFCVAAILVINRHKIIRETR SIDDAIKMFNDNMLKINVKRCVRMAIKLRKKYIYKLLKGGSE* '}, 'ic4r': {'Anther_Normal': {'expression_value': '0.699962'}, 'Anther_WT': {'expression_value': '13.9268'}, 'Callus_Normal': {'expression_value': '4.14972'}, 'Leaf': {'expression_value': '2.45623'}, 'Leaf_35S:OSH1_-GR+DEX_24h_r1': {'expression_value': '17.0853'}, 'Leaf_35S:OSH1_-GR+DEX_24h_r2': {'expression_value': '15.2163'}, 'Leaf_35S:OSH1_-GR+DEX_3h_r1': {'expression_value': '14.903'}, 'Leaf_35S:OSH1_-GR+DEX_3h_r2': {'expression_value': '14.3551'}, 'Leaf_35S:OSH1_-GR+DEX_6h_r1': {'expression_value': '14.1804'}, 'Leaf_35S:OSH1_-GR+DEX_6h_r2': {'expression_value': '14.7161'}, 'Leaf_35S:OSH1_-GR+DEX_r1': {'expression_value': '13.7276'}, 'Leaf_35S:OSH1_-GR+DEX_r2': {'expression_value': '14.7499'}, 'Leaf_B8-12_r1': {'expression_value': '16.642'}, 'Leaf_B8-12_r2': {'expression_value': '15.8441'}, 'Leaf_B8-12_r3': {'expression_value': '14.7102'}, 'Leaf_BLS256_r1': {'expression_value': '15.3368'}, 'Leaf_BLS256_r2': {'expression_value': '13.7879'}, 'Leaf_BLS256_r3': {'expression_value': '13.7802'}, 'Leaf_BLS279_r1': {'expression_value': '16.3299'}, 'Leaf_BLS279_r2': {'expression_value': '15.1995'}, 'Leaf_BLS279_r3': {'expression_value': '15.3523'}, 'Leaf_BXOR1_r1': {'expression_value': '22.0904'}, 'Leaf_BXOR1_r2': {'expression_value': '16.5472'}, 'Leaf_BXOR1_r3': {'expression_value': '14.7876'}, 'Leaf_CFBP2286_r1': {'expression_value': '19.6087'}, 'Leaf_CFBP2286_r2': {'expression_value': '17.8773'}, 'Leaf_CFBP2286_r3': {'expression_value': '18.2561'}, 'Leaf_CFBP7331_r1': {'expression_value': '18.3104'}, 'Leaf_CFBP7331_r2': {'expression_value': '17.8421'}, 'Leaf_CFBP7331_r3': {'expression_value': '15.1633'}, 'Leaf_CFBP7341_r1': {'expression_value': '20.2381'}, 'Leaf_CFBP7341_r2': {'expression_value': '20.0196'}, 'Leaf_CFBP7341_r3': {'expression_value': '18.1039'}, 'Leaf_CFBP7342_r3': {'expression_value': '17.2175'}, 'Leaf_CFBP7342_r4': {'expression_value': '18.3621'}, 'Leaf_CFBP7342_r5': {'expression_value': '15.7767'}, 'Leaf_L8_r1': {'expression_value': '15.3344'}, 'Leaf_L8_r2': {'expression_value': '11.7305'}, 'Leaf_L8_r3': {'expression_value': '14.1409'}, 'Leaf_Mock': {'expression_value': '17.2359'}, 'Leaf_Normal': {'expression_value': '9.62292'}, 'Leaf_Osbhlh148-DR_r1': {'expression_value': '10.6586'}, 'Leaf_Osbhlh148-DR_r2': {'expression_value': '10.8494'}, 'Leaf_Osbhlh148-WW_r1': {'expression_value': '12.6254'}, 'Leaf_Osbhlh148-WW_r2': {'expression_value': '11.6988'}, 'Leaf_Oshsfa2e-DR_r1': {'expression_value': '12.2053'}, 'Leaf_Oshsfa2e-DR_r2': {'expression_value': '12.47'}, 'Leaf_Oshsfa2e-WW_r1': {'expression_value': '16.1057'}, 'Leaf_Oshsfa2e-WW_r2': {'expression_value': '15.9311'}, 'Leaf_PXO99A_BLS256 Tal11b_r1': {'expression_value': '13.7203'}, 'Leaf_PXO99A_BLS256 Tal11b_r2': {'expression_value': '13.8123'}, 'Leaf_PXO99A_BLS256 Tal2a_r1': {'expression_value': '14.4091'}, 'Leaf_PXO99A_BLS256 Tal2a_r2': {'expression_value': '13.3854'}, 'Leaf_PXO99A_dTal280_r1': {'expression_value': '7.60847'}, 'Leaf_PXO99A_dTal280_r2': {'expression_value': '9.68895'}, 'Leaf_RS105_r1': {'expression_value': '16.0786'}, 'Leaf_RS105_r2': {'expression_value': '15.7335'}, 'Leaf_RS105_r3': {'expression_value': '16.7131'}, 'Leaf_T2-PiZt-11-R': {'expression_value': '15.275'}, 'Leaf_T2-PiZt-11-S': {'expression_value': '15.1356'}, 'Leaf_T4-PiZt-11-R': {'expression_value': '17.6957'}, 'Leaf_T4-PiZt-11-S': {'expression_value': '14.6693'}, 'Leaf_T6-Pi9-R': {'expression_value': '14.833'}, 'Leaf_T6-PiZt-11-R': {'expression_value': '16.9268'}, 'Leaf_T6-Spin1i-1-R': {'expression_value': '15.7093'}, 'Leaf_WT': {'expression_value': '4.11842'}, 'Leaf_WT-DEX_24h_r1': {'expression_value': '15.3363'}, 'Leaf_WT-DEX_24h_r2': {'expression_value': '14.3221'}, 'Leaf_WT-DEX_3h_r1': {'expression_value': '14.9937'}, 'Leaf_WT-DEX_3h_r2': {'expression_value': '15.2716'}, 'Leaf_WT-DEX_6h_r1': {'expression_value': '16.7822'}, 'Leaf_WT-DEX_6h_r2': {'expression_value': '16.4078'}, 'Leaf_WT-DEX_r1': {'expression_value': '16.2675'}, 'Leaf_WT-DEX_r2': {'expression_value': '15.2126'}, 'Leaf_WT-DR_SRP052306_r1': {'expression_value': '10.1933'}, 'Leaf_WT-DR_SRP052306_r2': {'expression_value': '10.236'}, 'Leaf_WT-DR_SRP052309_r1': {'expression_value': '10.1933'}, 'Leaf_WT-DR_SRP052309_r2': {'expression_value': '10.236'}, 'Leaf_WT-DR_SRP052310_r1': {'expression_value': '10.1933'}, 'Leaf_WT-DR_SRP052310_r2': {'expression_value': '10.236'}, 'Leaf_WT-WW_SRP052306_r1': {'expression_value': '17.2204'}, 'Leaf_WT-WW_SRP052306_r2': {'expression_value': '16.3613'}, 'Leaf_WT-WW_SRP052309_r1': {'expression_value': '17.2204'}, 'Leaf_WT-WW_SRP052309_r2': {'expression_value': '16.3613'}, 'Leaf_WT-WW_SRP052310_r1': {'expression_value': '17.2204'}, 'Leaf_WT-WW_SRP052310_r2': {'expression_value': '16.3613'}, 'Leaf_WT2007': {'expression_value': '17.1416'}, 'Leaf_WT2011': {'expression_value': '17.5169'}, 'Leaf_r1': {'expression_value': '13.9612'}, 'Leaf_r2': {'expression_value': '13.4327'}, 'Leaf_r3': {'expression_value': '13.8899'}, 'Panicle': {'expression_value': '8.09394'}, 'Panicle_Normal': {'expression_value': '8.59997'}, 'Panicle_young_0.5cm': {'expression_value': '10.4688'}, 'Pistil_Normal': {'expression_value': '2.7422'}, 'Root': {'expression_value': '3.09609'}, 'Root_-Pi_0day_r1': {'expression_value': '12.0654'}, 'Root_-Pi_0day_r2': {'expression_value': '11.8957'}, 'Root_-Pi_22day_r1': {'expression_value': '12.143'}, 'Root_-Pi_22day_r2': {'expression_value': '11.1892'}, 'Root_1h+Pi_r1': {'expression_value': '5.35355'}, 'Root_1h+Pi_r2': {'expression_value': '5.32131'}, 'Root_1h+Pi_r3': {'expression_value': '6.22099'}, 'Root_1h-Pi_r1': {'expression_value': '8.15346'}, 'Root_1h-Pi_r2': {'expression_value': '7.04935'}, 'Root_1h-Pi_r3': {'expression_value': '7.19556'}, 'Root_21d+1h+Pi_r1': {'expression_value': '8.02073'}, 'Root_21d+1h+Pi_r2': {'expression_value': '7.61546'}, 'Root_21d+1h+Pi_r3': {'expression_value': '9.4469'}, 'Root_21d+1h-Pi_r1': {'expression_value': '6.70694'}, 'Root_21d+1h-Pi_r2': {'expression_value': '6.61207'}, 'Root_21d+1h-Pi_r3': {'expression_value': '6.76346'}, 'Root_21d+1hRe_r1': {'expression_value': '4.15265'}, 'Root_21d+1hRe_r2': {'expression_value': '4.32562'}, 'Root_21d+1hRe_r3': {'expression_value': '4.53079'}, 'Root_21d+24h+Pi_r1': {'expression_value': '7.34075'}, 'Root_21d+24h+Pi_r2': {'expression_value': '6.97966'}, 'Root_21d+24h+Pi_r3': {'expression_value': '8.52898'}, 'Root_21d+24h-Pi_r1': {'expression_value': '6.32673'}, 'Root_21d+24h-Pi_r2': {'expression_value': '7.69184'}, 'Root_21d+24h-Pi_r3': {'expression_value': '7.17098'}, 'Root_21d+24hRe_r1': {'expression_value': '8.82507'}, 'Root_21d+24hRe_r2': {'expression_value': '8.34444'}, 'Root_21d+24hRe_r3': {'expression_value': '8.21438'}, 'Root_21d+6h+Pi_r1': {'expression_value': '7.78119'}, 'Root_21d+6h+Pi_r2': {'expression_value': '6.75571'}, 'Root_21d+6h+Pi_r3': {'expression_value': '7.10642'}, 'Root_21d+6h-Pi_r1': {'expression_value': '6.93463'}, 'Root_21d+6h-Pi_r2': {'expression_value': '6.90097'}, 'Root_21d+6h-Pi_r3': {'expression_value': '7.60051'}, 'Root_21d+6hRe_r1': {'expression_value': '7.18522'}, 'Root_21d+6hRe_r2': {'expression_value': '7.85809'}, 'Root_21d+6hRe_r3': {'expression_value': '7.70972'}, 'Root_21d-Pi&3d+Pi_r1': {'expression_value': '9.6547'}, 'Root_21d-Pi&3d+Pi_r2': {'expression_value': '9.50333'}, 'Root_21d3d+Pi_r1': {'expression_value': '7.65179'}, 'Root_21d3d+Pi_r2': {'expression_value': '8.5544'}, 'Root_21d3d+Pi_r3': {'expression_value': '9.29697'}, 'Root_21d3d-Pi_r1': {'expression_value': '7.07222'}, 'Root_21d3d-Pi_r2': {'expression_value': '6.86639'}, 'Root_21dd+Pi_r1': {'expression_value': '7.83068'}, 'Root_21dd+Pi_r2': {'expression_value': '7.69309'}, 'Root_21dd+Pi_r3': {'expression_value': '8.11527'}, 'Root_21dd-Pi_r1': {'expression_value': '6.48457'}, 'Root_21dd-Pi_r2': {'expression_value': '7.7543'}, 'Root_21dd-Pi_r3': {'expression_value': '7.78647'}, 'Root_24h+Pi_r1': {'expression_value': '8.51523'}, 'Root_24h+Pi_r2': {'expression_value': '7.99992'}, 'Root_24h+Pi_r3': {'expression_value': '8.42868'}, 'Root_24h-Pi_r1': {'expression_value': '8.0901'}, 'Root_24h-Pi_r2': {'expression_value': '7.78677'}, 'Root_24h-Pi_r3': {'expression_value': '7.22235'}, 'Root_3d+Pi_r2': {'expression_value': '7.94594'}, 'Root_3d+Pi_r3': {'expression_value': '8.46362'}, 'Root_3d-Pi_r1': {'expression_value': '6.73711'}, 'Root_3d-Pi_r2': {'expression_value': '8.04177'}, 'Root_3d-Pi_r3': {'expression_value': '7.32822'}, 'Root_52d-Pi': {'expression_value': '8.819'}, 'Root_6h+Pi_r1': {'expression_value': '7.67987'}, 'Root_6h+Pi_r2': {'expression_value': '6.90806'}, 'Root_6h+Pi_r3': {'expression_value': '7.37182'}, 'Root_6h-Pi_r1': {'expression_value': '6.76004'}, 'Root_6h-Pi_r2': {'expression_value': '7.71142'}, 'Root_6h-Pi_r3': {'expression_value': '7.94505'}, 'Root_7d+Pi_r1': {'expression_value': '8.19019'}, 'Root_7d+Pi_r2': {'expression_value': '7.41909'}, 'Root_7d+Pi_r3': {'expression_value': '8.81942'}, 'Root_7d-Pi_r1': {'expression_value': '7.66278'}, 'Root_7d-Pi_r2': {'expression_value': '6.72136'}, 'Root_7d-Pi_r3': {'expression_value': '7.19031'}, 'Root_Cd_0h_r1': {'expression_value': '6.50094'}, 'Root_Cd_0h_r2': {'expression_value': '9.31337'}, 'Root_Cd_0h_r3': {'expression_value': '9.37244'}, 'Root_Cd_1h_r1': {'expression_value': '2.64312'}, 'Root_Cd_1h_r2': {'expression_value': '2.85718'}, 'Root_Cd_1h_r3': {'expression_value': '1.68953'}, 'Root_Cd_24h_r1': {'expression_value': '1.34882'}, 'Root_DCL3a_+Pi': {'expression_value': '9.76006'}, 'Root_DCL3a_-Pi': {'expression_value': '8.22841'}, 'Root_Normal': {'expression_value': '8.14764'}, 'Root_WT_+Pi': {'expression_value': '9.71147'}, 'Root_WT_-Pi': {'expression_value': '7.46999'}, 'Seed_Normal': {'expression_value': '5.19078'}, 'Seed_OsCMT3a_WT_r1': {'expression_value': '17.4187'}, 'Seed_OsCMT3a_WT_r2': {'expression_value': '16.7115'}, 'Seed_OsCMT3a_WT_r3': {'expression_value': '16.2899'}, 'Seed_aleurone_ABA&GA_4h': {'expression_value': '4.64313'}, 'Seed_aleurone_ABA_4h': {'expression_value': '3.62535'}, 'Seed_aleurone_GA_4h': {'expression_value': '7.31281'}, 'Seed_aleurone_Mock_4h': {'expression_value': '1.92457'}, 'Seed_oscmt3a_mutant _r1': {'expression_value': '20.7344'}, 'Seed_oscmt3a_mutant _r2': {'expression_value': '21.7232'}, 'Seed_oscmt3a_mutant _r3': {'expression_value': '20.8555'}, 'Shoot_1h+Pi_r1': {'expression_value': '2.60121'}, 'Shoot_1h+Pi_r2': {'expression_value': '2.86351'}, 'Shoot_1h+Pi_r3': {'expression_value': '2.83441'}, 'Shoot_1h-Pi_r1': {'expression_value': '3.01729'}, 'Shoot_1h-Pi_r2': {'expression_value': '3.21662'}, 'Shoot_1h-Pi_r3': {'expression_value': '3.29575'}, 'Shoot_21d+1h+Pi_r1': {'expression_value': '3.7633'}, 'Shoot_21d+1h+Pi_r2': {'expression_value': '3.74546'}, 'Shoot_21d+1h+Pi_r3': {'expression_value': '4.67561'}, 'Shoot_21d+1h-Pi_r1': {'expression_value': '5.82574'}, 'Shoot_21d+1h-Pi_r2': {'expression_value': '4.9225'}, 'Shoot_21d+1h-Pi_r3': {'expression_value': '5.09965'}, 'Shoot_21d+1hRe_r1': {'expression_value': '5.0918'}, 'Shoot_21d+1hRe_r2': {'expression_value': '5.71916'}, 'Shoot_21d+1hRe_r3': {'expression_value': '4.34219'}, 'Shoot_21d+24h+Pi_r1': {'expression_value': '3.76337'}, 'Shoot_21d+24h+Pi_r2': {'expression_value': '3.5759'}, 'Shoot_21d+24h+Pi_r3': {'expression_value': '3.89084'}, 'Shoot_21d+24h-Pi_r1': {'expression_value': '4.39033'}, 'Shoot_21d+24h-Pi_r2': {'expression_value': '5.61394'}, 'Shoot_21d+24h-Pi_r3': {'expression_value': '4.20872'}, 'Shoot_21d+24hRe_r1': {'expression_value': '4.09216'}, 'Shoot_21d+24hRe_r2': {'expression_value': '4.7795'}, 'Shoot_21d+24hRe_r3': {'expression_value': '4.97389'}, 'Shoot_21d+6h+Pi_r1': {'expression_value': '4.47878'}, 'Shoot_21d+6h+Pi_r2': {'expression_value': '4.73852'}, 'Shoot_21d+6h+Pi_r3': {'expression_value': '4.38451'}, 'Shoot_21d+6h-Pi_r1': {'expression_value': '6.71773'}, 'Shoot_21d+6h-Pi_r2': {'expression_value': '6.72951'}, 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{'expression_value': '12.9766'}, 'Shoot_Cd_1h_r2': {'expression_value': '10.0802'}, 'Shoot_Cd_1h_r3': {'expression_value': '11.9476'}, 'Shoot_Cd_24h_r1': {'expression_value': '7.37409'}, 'Shoot_Cd_24h_r2': {'expression_value': '8.19756'}, 'Shoot_Cd_24h_r3': {'expression_value': '6.79743'}, 'Shoot_MET1-2_Mm': {'expression_value': '6.35108'}, 'Shoot_MET1-2_WT': {'expression_value': '5.4868'}, 'Shoot_MET1-2_mm': {'expression_value': '7.89065'}, 'Shoot_Normal': {'expression_value': '1.2693'}, 'Shoot_WT': {'expression_value': '13.045'}}, 'embl_ebi': {'9 Davidson - anther': '7', '9 Davidson - callus': 'NA', '9 Davidson - carpel': 'NA', '9 Davidson - early inflorescence': '20', '9 Davidson - emerging inflorescence': '22', '9 Davidson - endosperm': '2', '9 Davidson - leaf': '18', '9 Davidson - microgametophyte vegetative cell': 'NA', '9 Davidson - pistil': '13', '9 Davidson - plant egg cell': 'NA', '9 Davidson - plant embryo': '19', '9 Davidson - pollen sperm cell': 'NA', '9 Davidson - post-flowering panicle': 'NA', '9 Davidson - pre-flowering panicle': 'NA', '9 Davidson - root': 'NA', '9 Davidson - seed': 'NA', '9 Davidson - seed 10 days after pollination': '5', '9 Davidson - seed 5 days after pollination': '11', '9 Davidson - shoot': 'NA', '7 Sakai - anther': 'NA', '7 Sakai - callus': '12', '7 Sakai - carpel': 'NA', '7 Sakai - early inflorescence': 'NA', '7 Sakai - emerging inflorescence': 'NA', '7 Sakai - endosperm': 'NA', '7 Sakai - leaf': '29', '7 Sakai - microgametophyte vegetative cell': 'NA', '7 Sakai - pistil': 'NA', '7 Sakai - plant egg cell': 'NA', '7 Sakai - plant embryo': 'NA', '7 Sakai - pollen sperm cell': 'NA', '7 Sakai - post-flowering panicle': '24', '7 Sakai - pre-flowering panicle': '27', '7 Sakai - root': '23', '7 Sakai - seed': '9', '7 Sakai - seed 10 days after pollination': 'NA', '7 Sakai - seed 5 days after pollination': 'NA', '7 Sakai - shoot': '21', '4 Zhang et al - anther': '6', '4 Zhang et al - callus': 'NA', '4 Zhang et al - carpel': '17', '4 Zhang et al - early inflorescence': 'NA', '4 Zhang et al - emerging inflorescence': 'NA', '4 Zhang et al - endosperm': 'NA', '4 Zhang et al - leaf': 'NA', '4 Zhang et al - microgametophyte vegetative cell': 'NA', '4 Zhang et al - pistil': 'NA', '4 Zhang et al - plant egg cell': 'NA', '4 Zhang et al - plant embryo': 'NA', '4 Zhang et al - pollen sperm cell': 'NA', '4 Zhang et al - post-flowering panicle': 'NA', '4 Zhang et al - pre-flowering panicle': 'NA', '4 Zhang et al - root': 'NA', '4 Zhang et al - seed': '13', '4 Zhang et al - seed 10 days after pollination': 'NA', '4 Zhang et al - seed 5 days after pollination': 'NA', '4 Zhang et al - shoot': '10', 'Anderson et al - anther': 'NA', 'Anderson et al - callus': 'NA', 'Anderson et al - carpel': 'NA', 'Anderson et al - early inflorescence': 'NA', 'Anderson et al - emerging inflorescence': 'NA', 'Anderson et al - endosperm': 'NA', 'Anderson et al - leaf': 'NA', 'Anderson et al - microgametophyte vegetative cell': '1', 'Anderson et al - pistil': 'NA', 'Anderson et al - plant egg cell': '14', 'Anderson et al - plant embryo': 'NA', 'Anderson et al - pollen sperm cell': '0', 'Anderson et al - post-flowering panicle': 'NA', 'Anderson et al - pre-flowering panicle': 'NA', 'Anderson et al - root': 'NA', 'Anderson et al - seed': 'NA', 'Anderson et al - seed 10 days after pollination': 'NA', 'Anderson et al - seed 5 days after pollination': 'NA', 'Anderson et al - shoot': 'NA'}}, 'OsNippo08g047400': {'msu': {'Genomic Sequence': ' >LOC_Os08g06740 ATGGAGGTTTTCCAGGGAGTGGAGTTCGTGGCGCTGCGGGTGTGGTGCTGCAACTCCTAC CTCCACGCCGACGAGAACGGGCGGTCCGTCTACCACGGCAACCTGCGCGGCGGCAGCGGC GGCGGCTCGCTGCACAACGCGGTGTGGGCCGTAGAGGAGGTGGTCGCCGGGGTGCCTCCC ACGCGGTATGTGCTCCTCCGCGGAGCCTACGGCCGCTACCTCGGGTCCCCCGACGCCCCC GACCGCGAGCGCGAGGGCTGCTGCTCGCTCGAGGCAGCGCAGCGCGACCGCGACGTGCTG GATGTCGGTGCCATCATGTGGCGCGCCGTCGGGTGCTCCGGCCCGGACCTTGCCCGCGGC TGCGTCGTCCTTCTGCACGACAAGTCCGGGCGCTACCTGCGCGGCAACCAGACCTTCCTG GCTCGCCGCCCTGGCGTCTCCGTCCACAGCGACGTCGACAACGAAACGTCGCTGAGGTGG GAGGTGGTGCGTGTCACCCCGAGTCAAGTCAGACCTGAGCTCCCGATCGCCACTGAGGTG AGATCCTCCTACTCCTCCTCTCTCCTGATCCCCTCTCTTCCTTCAATTCTTGTGTTTGTG TTGTGTCCTTTATGCAATTCTACAACAAGAGGATTGTTCTGGTTCTAGTTGAAGAAGTCT TGATGATGATTGATTGGGTCGGAGATTAATCTTGAACCATGTAACAATCTGTGAATTTTT TTTATCAAATTCGTTGTGCTGCTGTTGTTGATTTTGTGCAGTGCAACTTGACCAAGAATC TCGTCGCGGCGTGCTTTCCCCCGCTGAGGCGGCAGATCCAGTTCGTGACGGCCGGCGCAG GCGCCGCCGGCAACATCGACGTGTTCACCGGGAAGTCGGTCCAGCTCCTGAGAGAGAAGC TCGCAGGCATTCTGGGCTACGACGAGTTTACACTCTGCGTCCGCGCCGGCATCCATGGGC GGCTAACTCCTCTGCTCATCGACCTGCCTCGCAGCCGGGAGACCCTGCACATCGTCCTTG TCAGGCCCAACAGTGAAGGTAAGCAGACTAGCTCGATATGCATGTGTCTGAATTCTCTGA ACATTGTTTATGTAGTTCTGAATGGTCTGCATAACTTGAGATTATTGATGATTCCGTAGA TGACAGGGACTGAATTCTGACAAGTGATGACAGTGACTGAATTTCCTGAAGCACAAGTTC TTGAAATGTTAAAACTGCATCAGTAAGTCTAGTATAGTTCACTAATTGCAGATTGCCTGG CATTTTTTCATTGCCAAGCTTGCTAGATTGACTGAGTTTCCTGTGGGCAATGTTTATGTT TTTCAGGTCCCTTTTGTCCGTTCAATAATGTGGATTTTGTAGTTTTCAGTACTGTAAATT GTTCAGTACTTTGGTATTTTGTGTTTCTTGATGATAGTTTTATCTGAATGTTGTGGAAAT TCGGAGATGATGATCTGAATATTGTAGATAGGGAAAACCAGTAGTAGCTGAATGGTATGT TAATACTGCTTGTCTCTGTTCTACGACACCTTAAAATGGATGGTCTGAAACCAGTTCAAG CCTATATCCAACTTGTTCAGCACTATTTAAACTTGCCTCTGTTATTACTTGTGCCTAACT GCATGATTTCTTTGCTATTGCTGCAGCTGACGATCAGTTGCTATTCCCAAATCTGAATGC ATTGTTGTTACTTGCCTCGGTTACCTCTCACATCTCCGGCAGCTCTTCTTCCGACAGAGG ATATGCAGTTTCAGGCTCCAATGGTCTCAGATTGCCATTGATCACACTGAGGCCCAATGA AACTGCTCCGCAGAGCTCGACGCCTCACAATGCTTATACCCTTCCTTTGACGGATAATGG CACCGCAGCCACAGCAAAGGTACAGTCCCGCTGA ', 'CDS': ' >LOC_Os08g06740.1 ATGGAGGTTTTCCAGGGAGTGGAGTTCGTGGCGCTGCGGGTGTGGTGCTGCAACTCCTAC CTCCACGCCGACGAGAACGGGCGGTCCGTCTACCACGGCAACCTGCGCGGCGGCAGCGGC GGCGGCTCGCTGCACAACGCGGTGTGGGCCGTAGAGGAGGTGGTCGCCGGGGTGCCTCCC ACGCGGTATGTGCTCCTCCGCGGAGCCTACGGCCGCTACCTCGGGTCCCCCGACGCCCCC GACCGCGAGCGCGAGGGCTGCTGCTCGCTCGAGGCAGCGCAGCGCGACCGCGACGTGCTG GATGTCGGTGCCATCATGTGGCGCGCCGTCGGGTGCTCCGGCCCGGACCTTGCCCGCGGC TGCGTCGTCCTTCTGCACGACAAGTCCGGGCGCTACCTGCGCGGCAACCAGACCTTCCTG GCTCGCCGCCCTGGCGTCTCCGTCCACAGCGACGTCGACAACGAAACGTCGCTGAGGTGG GAGGTGGTGCGTGTCACCCCGAGTCAAGTCAGACCTGAGCTCCCGATCGCCACTGAGTGC AACTTGACCAAGAATCTCGTCGCGGCGTGCTTTCCCCCGCTGAGGCGGCAGATCCAGTTC GTGACGGCCGGCGCAGGCGCCGCCGGCAACATCGACGTGTTCACCGGGAAGTCGGTCCAG CTCCTGAGAGAGAAGCTCGCAGGCATTCTGGGCTACGACGAGTTTACACTCTGCGTCCGC GCCGGCATCCATGGGCGGCTAACTCCTCTGCTCATCGACCTGCCTCGCAGCCGGGAGACC CTGCACATCGTCCTTGTCAGGCCCAACAGTGAAGCTGACGATCAGTTGCTATTCCCAAAT CTGAATGCATTGTTGTTACTTGCCTCGGTTACCTCTCACATCTCCGGCAGCTCTTCTTCC GACAGAGGATATGCAGTTTCAGGCTCCAATGGTCTCAGATTGCCATTGATCACACTGAGG CCCAATGAAACTGCTCCGCAGAGCTCGACGCCTCACAATGCTTATACCCTTCCTTTGACG GATAATGGCACCGCAGCCACAGCAAAGGTACAGTCCCGCTGA ', 'Protein': ' >LOC_Os08g06740.1 MEVFQGVEFVALRVWCCNSYLHADENGRSVYHGNLRGGSGGGSLHNAVWAVEEVVAGVPP TRYVLLRGAYGRYLGSPDAPDREREGCCSLEAAQRDRDVLDVGAIMWRAVGCSGPDLARG CVVLLHDKSGRYLRGNQTFLARRPGVSVHSDVDNETSLRWEVVRVTPSQVRPELPIATEC NLTKNLVAACFPPLRRQIQFVTAGAGAAGNIDVFTGKSVQLLREKLAGILGYDEFTLCVR AGIHGRLTPLLIDLPRSRETLHIVLVRPNSEADDQLLFPNLNALLLLASVTSHISGSSSS DRGYAVSGSNGLRLPLITLRPNETAPQSSTPHNAYTLPLTDNGTAATAKVQSR* '}, 'ic4r': {'Anther_Normal': {'expression_value': '0.0'}, 'Anther_WT': {'expression_value': '0.103275'}, 'Callus_Normal': {'expression_value': '0.0'}, 'Leaf': {'expression_value': '0.0'}, 'Leaf_35S:OSH1_-GR+DEX_24h_r1': {'expression_value': '0.036278'}, 'Leaf_35S:OSH1_-GR+DEX_24h_r2': {'expression_value': '0.0'}, 'Leaf_35S:OSH1_-GR+DEX_3h_r1': {'expression_value': '0.036278'}, 'Leaf_35S:OSH1_-GR+DEX_3h_r2': {'expression_value': '0.0'}, 'Leaf_35S:OSH1_-GR+DEX_6h_r1': {'expression_value': '0.036278'}, 'Leaf_35S:OSH1_-GR+DEX_6h_r2': {'expression_value': '0.0'}, 'Leaf_35S:OSH1_-GR+DEX_r1': {'expression_value': '0.036278'}, 'Leaf_35S:OSH1_-GR+DEX_r2': {'expression_value': '0.0'}, 'Leaf_B8-12_r1': {'expression_value': '0.0'}, 'Leaf_B8-12_r2': {'expression_value': '0.0'}, 'Leaf_B8-12_r3': {'expression_value': '0.00992'}, 'Leaf_BLS256_r1': {'expression_value': '0.032314'}, 'Leaf_BLS256_r2': {'expression_value': '0.032314'}, 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{'expression_value': '0.0'}, 'Root_Cd_0h_r3': {'expression_value': '0.0'}, 'Root_Cd_1h_r1': {'expression_value': '0.0'}, 'Root_Cd_1h_r2': {'expression_value': '0.0'}, 'Root_Cd_1h_r3': {'expression_value': '0.0'}, 'Root_Cd_24h_r1': {'expression_value': '0.0'}, 'Root_DCL3a_+Pi': {'expression_value': '0.0'}, 'Root_DCL3a_-Pi': {'expression_value': '0.0'}, 'Root_Normal': {'expression_value': '0.0'}, 'Root_WT_+Pi': {'expression_value': '0.0'}, 'Root_WT_-Pi': {'expression_value': '0.0'}, 'Seed_Normal': {'expression_value': '0.014058'}, 'Seed_OsCMT3a_WT_r1': {'expression_value': '0.0'}, 'Seed_OsCMT3a_WT_r2': {'expression_value': '0.0'}, 'Seed_OsCMT3a_WT_r3': {'expression_value': '0.0'}, 'Seed_aleurone_ABA&GA_4h': {'expression_value': '0.0'}, 'Seed_aleurone_ABA_4h': {'expression_value': '0.0'}, 'Seed_aleurone_GA_4h': {'expression_value': '0.0'}, 'Seed_aleurone_Mock_4h': {'expression_value': '0.0'}, 'Seed_oscmt3a_mutant _r1': {'expression_value': '0.0'}, 'Seed_oscmt3a_mutant _r2': {'expression_value': '0.0'}, 'Seed_oscmt3a_mutant _r3': {'expression_value': '0.0'}, 'Shoot_1h+Pi_r1': {'expression_value': '0.197928'}, 'Shoot_1h+Pi_r2': {'expression_value': '0.197928'}, 'Shoot_1h+Pi_r3': {'expression_value': '0.197928'}, 'Shoot_1h-Pi_r1': {'expression_value': '0.197928'}, 'Shoot_1h-Pi_r2': {'expression_value': '0.009818'}, 'Shoot_1h-Pi_r3': {'expression_value': '0.009818'}, 'Shoot_21d+1h+Pi_r1': {'expression_value': '0.009818'}, 'Shoot_21d+1h+Pi_r2': {'expression_value': '0.009818'}, 'Shoot_21d+1h+Pi_r3': {'expression_value': '0.009818'}, 'Shoot_21d+1h-Pi_r1': {'expression_value': '0.030715'}, 'Shoot_21d+1h-Pi_r2': {'expression_value': '0.030715'}, 'Shoot_21d+1h-Pi_r3': {'expression_value': '0.040282'}, 'Shoot_21d+1hRe_r1': {'expression_value': '0.001096'}, 'Shoot_21d+1hRe_r2': {'expression_value': '0.048942'}, 'Shoot_21d+1hRe_r3': {'expression_value': '0.065222'}, 'Shoot_21d+24h+Pi_r1': {'expression_value': '0.008474'}, 'Shoot_21d+24h+Pi_r2': {'expression_value': 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{'expression_value': '0.012704'}, 'Shoot_21dd+Pi_r3': {'expression_value': '0.012704'}, 'Shoot_21dd-Pi_r1': {'expression_value': '0.019701'}, 'Shoot_21dd-Pi_r2': {'expression_value': '0.019701'}, 'Shoot_21dd-Pi_r3': {'expression_value': '0.019701'}, 'Shoot_24h+Pi_r1': {'expression_value': '0.019701'}, 'Shoot_24h+Pi_r2': {'expression_value': '0.019701'}, 'Shoot_24h+Pi_r3': {'expression_value': '0.019701'}, 'Shoot_24h-Pi_r1': {'expression_value': '0.019701'}, 'Shoot_24h-Pi_r2': {'expression_value': '0.019701'}, 'Shoot_24h-Pi_r3': {'expression_value': '0.019701'}, 'Shoot_3d+Pi_r1': {'expression_value': '0.019701'}, 'Shoot_3d+Pi_r2': {'expression_value': '0.019701'}, 'Shoot_3d+Pi_r3': {'expression_value': '0.019701'}, 'Shoot_3d-Pi_r1': {'expression_value': '0.019701'}, 'Shoot_3d-Pi_r2': {'expression_value': '0.019701'}, 'Shoot_3d-Pi_r3': {'expression_value': '0.019701'}, 'Shoot_6h+Pi_r1': {'expression_value': '0.019701'}, 'Shoot_6h+Pi_r2': {'expression_value': '0.019701'}, 'Shoot_6h+Pi_r3': {'expression_value': '0.019701'}, 'Shoot_6h-Pi_r1': {'expression_value': '0.019701'}, 'Shoot_6h-Pi_r2': {'expression_value': '0.019701'}, 'Shoot_6h-Pi_r3': {'expression_value': '0.0'}, 'Shoot_7d+Pi_r1': {'expression_value': '0.0'}, 'Shoot_7d+Pi_r2': {'expression_value': '0.0'}, 'Shoot_7d+Pi_r3': {'expression_value': '0.01957'}, 'Shoot_7d-Pi_r1': {'expression_value': '0.0'}, 'Shoot_7d-Pi_r2': {'expression_value': '0.0'}, 'Shoot_7d-Pi_r3': {'expression_value': '0.0'}, 'Shoot_As(III)_24h': {'expression_value': '0.0'}, 'Shoot_Cd_0h_r1': {'expression_value': '0.0'}, 'Shoot_Cd_0h_r2': {'expression_value': '0.0'}, 'Shoot_Cd_0h_r3': {'expression_value': '0.0'}, 'Shoot_Cd_1h_r1': {'expression_value': '0.0'}, 'Shoot_Cd_1h_r2': {'expression_value': '0.0'}, 'Shoot_Cd_1h_r3': {'expression_value': '0.0'}, 'Shoot_Cd_24h_r1': {'expression_value': '0.0'}, 'Shoot_Cd_24h_r2': {'expression_value': '0.0'}, 'Shoot_Cd_24h_r3': {'expression_value': '0.0'}, 'Shoot_MET1-2_Mm': {'expression_value': '0.0'}, 'Shoot_MET1-2_WT': {'expression_value': '0.0'}, 'Shoot_MET1-2_mm': {'expression_value': '0.0'}, 'Shoot_Normal': {'expression_value': '0.027177'}, 'Shoot_WT': {'expression_value': '0.0'}}, 'gwas_atlas': {'VarID': ['osa11697710', 'osa11698116'], 'Traits': ['blast disease resistance', 'chalk size'], 'Species': ['Rice', 'Rice'], 'Position': ['chr8:3775057', 'chr8:3780346'], 'P-values': [4.36e-10, 1.51e-07], 'R2(%)': [\"'-\", \"'-\"], 'Mapped Gene(s)': ['Os08g0164300 Os08g0164400 ', 'Os08g0164400 '], 'Consequence Type(s)': ['downstream_gene_variant intron_variant ', 'downstream_gene_variant '], 'PMID': [25403621, 28803900]}}}\n"
     ]
    }
   ],
   "source": [
    "# Query with ids, locs and irics\n",
    "query = MultiQuery()\n",
    "result = query.query_by_ids(ids=[\"Os08g0164400\", \"Os07g0586200\"],\n",
    "                         locs=[\"LOC_Os10g01006\", \"LOC_Os07g39750\"],\n",
    "                         irics=[\"OsNippo01g010050\", \"OsNippo01g010300\"], number_process = 2,\n",
    "                         multi_processing=True, multi_threading=False, dbs=\"all\")\n",
    "query.save(result,save_path = \"./result/\",format=[\"csv\",\"html\",\"json\",\"pkl\"],hyper_link=False)\n",
    "print(\"Output database:\",result)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 6,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "Query attribute: AT4G32150 --- attribute 1/1\n",
      "Output database: {'AT4G32150': {'planteome': {'service': '/api/search/annotation', 'status': 'success', 'arguments': {}, 'comments': ['Results found for: annotation; queries: ; filters: '], 'data': [{'document_category': 'annotation', 'source': 'GDR', 'bioentity': 'GDR:ppa015845m', 'bioentity_internal_id': 'ppa015845m', 'bioentity_label': 'ppa015845m', 'bioentity_label_searchable': 'ppa015845m', 'annotation_class': 'GO:0005737', 'annotation_class_label': 'cytoplasm', 'annotation_class_label_searchable': 'cytoplasm', 'aspect': 'C', 'bioentity_name': 'udp-glycosyltransferase-like protein', 'bioentity_name_searchable': 'udp-glycosyltransferase-like protein', 'type': 'gene_product', 'date': '20130213', 'assigned_by': 'GDR:Scott_Schaeffer', 'bioentity_isoform': '', 'taxon': 'NCBITaxon:3760', 'taxon_label': 'Prunus persica', 'taxon_label_searchable': 'Prunus persica', 'taxon_closure_map': '{\"NCBITaxon:1437183\":\"Mesangiospermae\",\"NCBITaxon:171637\":\"Amygdaloideae\",\"NCBITaxon:3760\":\"Prunus persica\",\"NCBITaxon:721805\":\"Amygdaleae\",\"NCBITaxon:33090\":\"Viridiplantae\",\"NCBITaxon:3193\":\"Embryophyta\",\"NCBITaxon:3398\":\"Magnoliophyta\",\"NCBITaxon:71275\":\"rosids\",\"NCBITaxon:71240\":\"eudicotyledons\",\"NCBITaxon:3754\":\"Prunus\",\"NCBITaxon:1\":\"root\",\"NCBITaxon:131221\":\"Streptophytina\",\"NCBITaxon:131567\":\"cellular organisms\",\"NCBITaxon:2759\":\"Eukaryota\",\"NCBITaxon:91827\":\"Gunneridae\",\"NCBITaxon:58023\":\"Tracheophyta\",\"NCBITaxon:58024\":\"Spermatophyta\",\"NCBITaxon:3744\":\"Rosales\",\"NCBITaxon:3745\":\"Rosaceae\",\"NCBITaxon:35493\":\"Streptophyta\",\"NCBITaxon:78536\":\"Euphyllophyta\",\"NCBITaxon:1437201\":\"Pentapetalae\",\"NCBITaxon:91835\":\"fabids\"}', 'evidence_type': 'IEA', 'evidence': 'ECO:0000501', 'evidence_label': 'evidence used in automatic assertion', 'evidence_label_searchable': 'evidence used in automatic assertion', 'evidence_closure_map': '{\"ECO:0000501\":\"evidence used in automatic assertion\",\"ECO:0000000\":\"evidence\"}', 'evidence_subset_closure_map': '{\"ECO:0000501\":\"evidence used in automatic assertion\"}', 'isa_partof_closure_map': '{\"GO:0005737\":\"cytoplasm\",\"GO:0044464\":\"cell part\",\"GO:0005575\":\"cellular_component\",\"GO:0044424\":\"intracellular part\"}', 'regulates_closure_map': '{\"GO:0005737\":\"cytoplasm\",\"GO:0044464\":\"cell part\",\"GO:0005575\":\"cellular_component\",\"GO:0044424\":\"intracellular part\"}', 'id': '474452097070613031353834356d097070613031353834356d0909474f3a3030303537333709504d49443a54424109494541090943097564702d676c79636f73796c7472616e736665726173652d6c696b652070726f7465696e094e410967656e655f70726f64756374097461786f6e3a33373630093230313330323133094744523a53636f74745f536368616566666572090909', 'evidence_closure_label': ['evidence', 'evidence used in automatic assertion'], 'isa_partof_closure_label': ['cytoplasm', 'cell part', 'cellular_component', 'intracellular part'], 'evidence_subset_closure': ['ECO:0000501'], 'evidence_subset_closure_label': ['evidence used in automatic assertion'], 'taxon_closure_label': ['Prunus persica', 'Eukaryota', 'Streptophytina', 'Rosaceae', 'Rosales', 'Mesangiospermae', 'Tracheophyta', 'Spermatophyta', 'eudicotyledons', 'Viridiplantae', 'Amygdaleae', 'Embryophyta', 'Streptophyta', 'rosids', 'Prunus', 'Euphyllophyta', 'Gunneridae', 'root', 'cellular organisms', 'Magnoliophyta', 'Amygdaloideae', 'fabids', 'Pentapetalae'], 'synonym_searchable': ['NA'], 'isa_partof_closure_label_searchable': ['cytoplasm', 'cell part', 'cellular_component', 'intracellular part'], 'reference': ['PMID:TBA'], 'synonym': ['NA'], 'evidence_closure_label_searchable': ['evidence', 'evidence used in automatic assertion'], 'regulates_closure': ['GO:0005737', 'GO:0044464', 'GO:0005575', 'GO:0044424'], 'regulates_closure_label_searchable': ['cytoplasm', 'cell part', 'cellular_component', 'intracellular part'], 'evidence_type_closure': ['evidence', 'evidence used in automatic assertion'], 'regulates_closure_label': ['cytoplasm', 'cell part', 'cellular_component', 'intracellular part'], 'reference_searchable': ['PMID:TBA'], 'taxon_closure_label_searchable': ['Prunus persica', 'Eukaryota', 'Streptophytina', 'Rosaceae', 'Rosales', 'Mesangiospermae', 'Tracheophyta', 'Spermatophyta', 'eudicotyledons', 'Viridiplantae', 'Amygdaleae', 'Embryophyta', 'Streptophyta', 'rosids', 'Prunus', 'Euphyllophyta', 'Gunneridae', 'root', 'cellular organisms', 'Magnoliophyta', 'Amygdaloideae', 'fabids', 'Pentapetalae'], 'isa_partof_closure': ['GO:0005737', 'GO:0044464', 'GO:0005575', 'GO:0044424'], 'taxon_closure': ['NCBITaxon:3760', 'NCBITaxon:2759', 'NCBITaxon:131221', 'NCBITaxon:3745', 'NCBITaxon:3744', 'NCBITaxon:1437183', 'NCBITaxon:58023', 'NCBITaxon:58024', 'NCBITaxon:71240', 'NCBITaxon:33090', 'NCBITaxon:721805', 'NCBITaxon:3193', 'NCBITaxon:35493', 'NCBITaxon:71275', 'NCBITaxon:3754', 'NCBITaxon:78536', 'NCBITaxon:91827', 'NCBITaxon:1', 'NCBITaxon:131567', 'NCBITaxon:3398', 'NCBITaxon:171637', 'NCBITaxon:91835', 'NCBITaxon:1437201'], 'evidence_closure': ['ECO:0000000', 'ECO:0000501'], 'evidence_subset_closure_label_searchable': ['evidence used in automatic assertion'], 'score': 1}, {'document_category': 'annotation', 'source': 'GDR', 'bioentity': 'GDR:ppa015845m', 'bioentity_internal_id': 'ppa015845m', 'bioentity_label': 'ppa015845m', 'bioentity_label_searchable': 'ppa015845m', 'annotation_class': 'GO:0003824', 'annotation_class_label': 'catalytic activity', 'annotation_class_label_searchable': 'catalytic activity', 'aspect': 'F', 'bioentity_name': 'udp-glycosyltransferase-like protein', 'bioentity_name_searchable': 'udp-glycosyltransferase-like protein', 'type': 'gene_product', 'date': '20130213', 'assigned_by': 'GDR:Scott_Schaeffer', 'bioentity_isoform': '', 'taxon': 'NCBITaxon:3760', 'taxon_label': 'Prunus persica', 'taxon_label_searchable': 'Prunus persica', 'taxon_closure_map': '{\"NCBITaxon:1437183\":\"Mesangiospermae\",\"NCBITaxon:171637\":\"Amygdaloideae\",\"NCBITaxon:3760\":\"Prunus persica\",\"NCBITaxon:721805\":\"Amygdaleae\",\"NCBITaxon:33090\":\"Viridiplantae\",\"NCBITaxon:3193\":\"Embryophyta\",\"NCBITaxon:3398\":\"Magnoliophyta\",\"NCBITaxon:71275\":\"rosids\",\"NCBITaxon:71240\":\"eudicotyledons\",\"NCBITaxon:3754\":\"Prunus\",\"NCBITaxon:1\":\"root\",\"NCBITaxon:131221\":\"Streptophytina\",\"NCBITaxon:131567\":\"cellular organisms\",\"NCBITaxon:2759\":\"Eukaryota\",\"NCBITaxon:91827\":\"Gunneridae\",\"NCBITaxon:58023\":\"Tracheophyta\",\"NCBITaxon:58024\":\"Spermatophyta\",\"NCBITaxon:3744\":\"Rosales\",\"NCBITaxon:3745\":\"Rosaceae\",\"NCBITaxon:35493\":\"Streptophyta\",\"NCBITaxon:78536\":\"Euphyllophyta\",\"NCBITaxon:1437201\":\"Pentapetalae\",\"NCBITaxon:91835\":\"fabids\"}', 'evidence_type': 'IEA', 'evidence': 'ECO:0000501', 'evidence_label': 'evidence used in automatic assertion', 'evidence_label_searchable': 'evidence used in automatic 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'474452097070613031343834366d097070613031343834366d0909474f3a3030313633303109504d49443a54424109494541090946096379636c6963206e75636c656f746964652d676174656420696f6e206368616e6e656c20312d6c696b65094e410967656e655f70726f64756374097461786f6e3a33373630093230313330323133094744523a53636f74745f536368616566666572090909', 'evidence_closure_label': ['evidence', 'evidence used in automatic assertion'], 'isa_partof_closure_label': ['catalytic activity', 'occurrent', 'process', 'transferase activity, transferring phosphorus-containing groups', 'transferase activity', 'kinase activity', 'entity', 'molecular_function'], 'evidence_subset_closure': ['ECO:0000501'], 'evidence_subset_closure_label': ['evidence used in automatic assertion'], 'taxon_closure_label': ['Prunus persica', 'Eukaryota', 'Streptophytina', 'Rosaceae', 'Rosales', 'Mesangiospermae', 'Tracheophyta', 'Spermatophyta', 'eudicotyledons', 'Viridiplantae', 'Amygdaleae', 'Embryophyta', 'Streptophyta', 'rosids', 'Prunus', 'Euphyllophyta', 'Gunneridae', 'root', 'cellular organisms', 'Magnoliophyta', 'Amygdaloideae', 'fabids', 'Pentapetalae'], 'synonym_searchable': ['NA'], 'isa_partof_closure_label_searchable': ['catalytic activity', 'occurrent', 'process', 'transferase activity, transferring phosphorus-containing groups', 'transferase activity', 'kinase activity', 'entity', 'molecular_function'], 'reference': ['PMID:TBA'], 'synonym': ['NA'], 'evidence_closure_label_searchable': ['evidence', 'evidence used in automatic assertion'], 'regulates_closure': ['GO:0003824', 'BFO:0000003', 'BFO:0000015', 'GO:0016772', 'GO:0016740', 'GO:0016301', 'BFO:0000001', 'GO:0003674'], 'regulates_closure_label_searchable': ['catalytic activity', 'occurrent', 'process', 'transferase activity, transferring phosphorus-containing groups', 'transferase activity', 'kinase activity', 'entity', 'molecular_function'], 'evidence_type_closure': ['evidence', 'evidence used in automatic assertion'], 'regulates_closure_label': ['catalytic activity', 'occurrent', 'process', 'transferase activity, transferring phosphorus-containing groups', 'transferase activity', 'kinase activity', 'entity', 'molecular_function'], 'reference_searchable': ['PMID:TBA'], 'taxon_closure_label_searchable': ['Prunus persica', 'Eukaryota', 'Streptophytina', 'Rosaceae', 'Rosales', 'Mesangiospermae', 'Tracheophyta', 'Spermatophyta', 'eudicotyledons', 'Viridiplantae', 'Amygdaleae', 'Embryophyta', 'Streptophyta', 'rosids', 'Prunus', 'Euphyllophyta', 'Gunneridae', 'root', 'cellular organisms', 'Magnoliophyta', 'Amygdaloideae', 'fabids', 'Pentapetalae'], 'isa_partof_closure': ['GO:0003824', 'BFO:0000003', 'BFO:0000015', 'GO:0016772', 'GO:0016740', 'GO:0016301', 'BFO:0000001', 'GO:0003674'], 'taxon_closure': ['NCBITaxon:3760', 'NCBITaxon:2759', 'NCBITaxon:131221', 'NCBITaxon:3745', 'NCBITaxon:3744', 'NCBITaxon:1437183', 'NCBITaxon:58023', 'NCBITaxon:58024', 'NCBITaxon:71240', 'NCBITaxon:33090', 'NCBITaxon:721805', 'NCBITaxon:3193', 'NCBITaxon:35493', 'NCBITaxon:71275', 'NCBITaxon:3754', 'NCBITaxon:78536', 'NCBITaxon:91827', 'NCBITaxon:1', 'NCBITaxon:131567', 'NCBITaxon:3398', 'NCBITaxon:171637', 'NCBITaxon:91835', 'NCBITaxon:1437201'], 'evidence_closure': ['ECO:0000000', 'ECO:0000501'], 'evidence_subset_closure_label_searchable': ['evidence used in automatic assertion'], 'score': 1}, {'document_category': 'annotation', 'source': 'GDR', 'bioentity': 'GDR:ppa014846m', 'bioentity_internal_id': 'ppa014846m', 'bioentity_label': 'ppa014846m', 'bioentity_label_searchable': 'ppa014846m', 'annotation_class': 'GO:0005886', 'annotation_class_label': 'plasma membrane', 'annotation_class_label_searchable': 'plasma membrane', 'aspect': 'C', 'bioentity_name': 'cyclic nucleotide-gated ion channel 1-like', 'bioentity_name_searchable': 'cyclic nucleotide-gated ion channel 1-like', 'type': 'gene_product', 'date': '20130213', 'assigned_by': 'GDR:Scott_Schaeffer', 'bioentity_isoform': '', 'taxon': 'NCBITaxon:3760', 'taxon_label': 'Prunus persica', 'taxon_label_searchable': 'Prunus persica', 'taxon_closure_map': '{\"NCBITaxon:1437183\":\"Mesangiospermae\",\"NCBITaxon:171637\":\"Amygdaloideae\",\"NCBITaxon:3760\":\"Prunus persica\",\"NCBITaxon:721805\":\"Amygdaleae\",\"NCBITaxon:33090\":\"Viridiplantae\",\"NCBITaxon:3193\":\"Embryophyta\",\"NCBITaxon:3398\":\"Magnoliophyta\",\"NCBITaxon:71275\":\"rosids\",\"NCBITaxon:71240\":\"eudicotyledons\",\"NCBITaxon:3754\":\"Prunus\",\"NCBITaxon:1\":\"root\",\"NCBITaxon:131221\":\"Streptophytina\",\"NCBITaxon:131567\":\"cellular organisms\",\"NCBITaxon:2759\":\"Eukaryota\",\"NCBITaxon:91827\":\"Gunneridae\",\"NCBITaxon:58023\":\"Tracheophyta\",\"NCBITaxon:58024\":\"Spermatophyta\",\"NCBITaxon:3744\":\"Rosales\",\"NCBITaxon:3745\":\"Rosaceae\",\"NCBITaxon:35493\":\"Streptophyta\",\"NCBITaxon:78536\":\"Euphyllophyta\",\"NCBITaxon:1437201\":\"Pentapetalae\",\"NCBITaxon:91835\":\"fabids\"}', 'evidence_type': 'IEA', 'evidence': 'ECO:0000501', 'evidence_label': 'evidence used in automatic assertion', 'evidence_label_searchable': 'evidence used in automatic assertion', 'evidence_closure_map': '{\"ECO:0000501\":\"evidence used in automatic assertion\",\"ECO:0000000\":\"evidence\"}', 'evidence_subset_closure_map': '{\"ECO:0000501\":\"evidence used in automatic assertion\"}', 'isa_partof_closure_map': '{\"GO:0016020\":\"membrane\",\"GO:0044464\":\"cell part\",\"GO:0005575\":\"cellular_component\",\"GO:0005886\":\"plasma membrane\"}', 'regulates_closure_map': '{\"GO:0016020\":\"membrane\",\"GO:0044464\":\"cell part\",\"GO:0005575\":\"cellular_component\",\"GO:0005886\":\"plasma membrane\"}', 'id': '474452097070613031343834366d097070613031343834366d0909474f3a3030303538383609504d49443a54424109494541090943096379636c6963206e75636c656f746964652d676174656420696f6e206368616e6e656c20312d6c696b65094e410967656e655f70726f64756374097461786f6e3a33373630093230313330323133094744523a53636f74745f536368616566666572090909', 'evidence_closure_label': ['evidence', 'evidence used in automatic assertion'], 'isa_partof_closure_label': ['membrane', 'cell part', 'cellular_component', 'plasma membrane'], 'evidence_subset_closure': ['ECO:0000501'], 'evidence_subset_closure_label': ['evidence used in automatic assertion'], 'taxon_closure_label': ['Prunus persica', 'Eukaryota', 'Streptophytina', 'Rosaceae', 'Rosales', 'Mesangiospermae', 'Tracheophyta', 'Spermatophyta', 'eudicotyledons', 'Viridiplantae', 'Amygdaleae', 'Embryophyta', 'Streptophyta', 'rosids', 'Prunus', 'Euphyllophyta', 'Gunneridae', 'root', 'cellular organisms', 'Magnoliophyta', 'Amygdaloideae', 'fabids', 'Pentapetalae'], 'synonym_searchable': ['NA'], 'isa_partof_closure_label_searchable': ['membrane', 'cell part', 'cellular_component', 'plasma membrane'], 'reference': ['PMID:TBA'], 'synonym': ['NA'], 'evidence_closure_label_searchable': ['evidence', 'evidence used in automatic assertion'], 'regulates_closure': ['GO:0016020', 'GO:0044464', 'GO:0005575', 'GO:0005886'], 'regulates_closure_label_searchable': ['membrane', 'cell part', 'cellular_component', 'plasma membrane'], 'evidence_type_closure': ['evidence', 'evidence used in automatic assertion'], 'regulates_closure_label': ['membrane', 'cell part', 'cellular_component', 'plasma membrane'], 'reference_searchable': ['PMID:TBA'], 'taxon_closure_label_searchable': ['Prunus persica', 'Eukaryota', 'Streptophytina', 'Rosaceae', 'Rosales', 'Mesangiospermae', 'Tracheophyta', 'Spermatophyta', 'eudicotyledons', 'Viridiplantae', 'Amygdaleae', 'Embryophyta', 'Streptophyta', 'rosids', 'Prunus', 'Euphyllophyta', 'Gunneridae', 'root', 'cellular organisms', 'Magnoliophyta', 'Amygdaloideae', 'fabids', 'Pentapetalae'], 'isa_partof_closure': ['GO:0016020', 'GO:0044464', 'GO:0005575', 'GO:0005886'], 'taxon_closure': ['NCBITaxon:3760', 'NCBITaxon:2759', 'NCBITaxon:131221', 'NCBITaxon:3745', 'NCBITaxon:3744', 'NCBITaxon:1437183', 'NCBITaxon:58023', 'NCBITaxon:58024', 'NCBITaxon:71240', 'NCBITaxon:33090', 'NCBITaxon:721805', 'NCBITaxon:3193', 'NCBITaxon:35493', 'NCBITaxon:71275', 'NCBITaxon:3754', 'NCBITaxon:78536', 'NCBITaxon:91827', 'NCBITaxon:1', 'NCBITaxon:131567', 'NCBITaxon:3398', 'NCBITaxon:171637', 'NCBITaxon:91835', 'NCBITaxon:1437201'], 'evidence_closure': ['ECO:0000000', 'ECO:0000501'], 'evidence_subset_closure_label_searchable': ['evidence used in automatic assertion'], 'score': 1}], 'time': 0, 'date': '2020-07-21T01:07:51'}}}\n"
     ]
    }
   ],
   "source": [
    "# Query with new database\n",
    "query = MultiQuery()\n",
    "result = query.query_new_database(atts=['AT4G32150'], number_process= 4,\n",
    "                    multi_processing=True,multi_threading=True,dbs=['planteome'])\n",
    "query.save(result, save_path=\"./result/\", format=[\"csv\", \"html\", \"json\", \"pkl\"], hyper_link=False)\n",
    "print(\"Output database:\",result)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 7,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "Query iricname: OsNippo01g011700 --- Gene 1/12\n",
      "Query iricname: OsNippo01g011750 --- Gene 2/12\n",
      "Query iricname: OsNippo01g011800 --- Gene 3/12\n",
      "Query iricname: OsNippo01g011850 --- Gene 4/12\n",
      "Query iricname: OsNippo01g011900 --- Gene 5/12\n",
      "Query iricname: OsNippo01g011350 --- Gene 6/12\n",
      "Query iricname: OsNippo01g011450 --- Gene 7/12\n",
      "Query iricname: OsNippo01g011500 --- Gene 8/12\n",
      "Query iricname: OsNippo01g011550 --- Gene 9/12\n",
      "Query iricname: OsNippo01g011600 --- Gene 10/12\n",
      "Query iricname: OsNippo01g011650 --- Gene 11/12\n",
      "Query iricname: OsNippo01g011400 --- Gene 12/12\n",
      "Output database: {'OsNippo01g011700': {'oryzabase': {'Trait Gene Id': '22606', 'CGSNL Gene Symbol': 'TLP27', 'Gene symbol synonym(s)': 'OsTLP27', 'CGSNL Gene Name': 'THYLAKOID LUMENAL PROTEIN 27', 'Gene name synonym(s)': 'Thylakoid lumenal protein 27', 'Protein Name': 'THYLAKOID LUMENAL PROTEIN 27', 'Explanation': 'AtTLP homolog. TO:0020116: photochemical quenching.', 'Trait Class': ' Coloration - Chlorophyll', 'RAP ID': 'Os01g0102300', 'MUS ID': 'LOC_Os01g01280.1', 'Gene Ontology': 'GO:0015979 - photosynthesis, GO:0009658 - chloroplast organization, GO:0043476 - pigment accumulation, GO:0007623 - circadian rhythm, GO:0009543 - chloroplast thylakoid lumen', 'Trait Ontology': 'TO:0000494 - pigment content, TO:0002715 - chloroplast development trait', 'Plant Ontology': 'PO:0025034 - leaf , PO:0020104 - leaf sheath \\n'}, 'rapdb': {'Transcript_ID': 'Os01t0102300-01', 'Locus_ID': 'Os01g0102300', 'Description': 'Thylakoid lumen protein, Photosynthesis and chloroplast development', 'RAP-DB Gene Symbol Synonym(s)': 'OsTLP27', 'CGSNL Gene Symbol': 'TLP27', 'CGSNL Gene Name': 'THYLAKOID LUMENAL PROTEIN 27', 'Oryzabase Gene Symbol Synonym(s)': 'OsTLP27', 'Oryzabase Gene Name Synonym(s)': 'Thylakoid lumenal protein 27', 'Transcript evidence': 'AK067320', 'ORF evidence': 'Q94CX1', 'Curation Date': 'March 7, 2017', 'Literature PMID': '22921006', 'FLcDNA clone ID': 'J013106P10', 'Oryzabase Trait Gene ID': '22606\\n'}, 'gramene': {'_id': 'Os01g0102300', 'name': 'OsTLP27', 'description': 'Thylakoid lumen protein, Photosynthesis and chloroplast development (Os01t0102300-01)', 'biotype': 'protein_coding', 'taxon_id': 39947, 'system_name': 'oryza_sativa', 'db_type': 'core', 'gene_idx': 20, 'location': {'region': '1', 'start': 134300, 'end': 135439, 'strand': 1, 'map': 'GCA_001433935.1'}, 'xrefs': [{'db': 'RAP-DB', 'ids': ['OsTLP27']}, {'db': 'UniParc', 'ids': ['UPI00000ABC71']}, {'db': 'Uniprot/SPTREMBL', 'ids': ['Q94CX1']}, {'db': 'STRING', 'ids': ['39947.LOC_Os01g01280.1']}, {'db': 'RefSeq_peptide', 'ids': ['XP_015631379.1']}, {'db': 'protein_id', 'ids': ['BAF03661.1', 'BAB62636.1', 'BAB92138.1', 'BAS69931.1', 'EAZ10191.1', 'BAD45508.1']}, {'db': 'RefSeq_dna', 'ids': ['XM_015775893.1', 'XM_015775893.2', 'XM_015775886.2']}, {'db': 'EntrezGene', 'ids': ['4326466']}], 'gene_structure': {'exons': [{'id': 'Os01t0102300-01.exon1', 'start': 1, 'end': 316}, {'id': 'Os01t0102300-01.exon2', 'start': 399, 'end': 525}, {'id': 'Os01t0102300-01.exon3', 'start': 613, 'end': 1140}], 'transcripts': [{'exons': ['Os01t0102300-01.exon1', 'Os01t0102300-01.exon2', 'Os01t0102300-01.exon3'], 'length': 971, 'exon_junctions': [316, 443], 'cds': {'start': 12, 'end': 785}, 'translation': {'id': 'Os01t0102300-01', 'length': 257, 'features': {'family': {'entries': [{'name': 'PTHR36783', 'description': 'FAMILY NOT NAMED', 'db': 'PANTHER', 'interpro': 'IPR037734', 'start': 15, 'end': 245}]}}}, 'id': 'Os01t0102300-01'}], 'canonical_transcript': 'Os01t0102300-01'}, 'annotations': {'domains': {'entries': [{'id': 'IPR037734', 'name': 'Thylakoid_lumenal_17.9', 'description': 'Thylakoid lumenal 17.9kDa protein'}]}, 'GO': {'entries': [{'id': 'GO:0009543', 'name': 'chloroplast thylakoid lumen', 'namespace': 'cellular_component', 'def': 'The cavity enclosed within the chloroplast thylakoid membrane. An example of this component is found in Arabidopsis thaliana.', 'subset': None, 'evidence_code': 'IBA'}], 'ancestors': [5575, 5622, 5623, 5737, 9507, 9534, 9536, 9579, 31976, 31977, 31978, 31984, 43226, 43227, 43229, 43231, 44422, 44424, 44434, 44435, 44436, 44444, 44446, 44464]}, 'taxonomy': {'entries': [{'_id': 39947, 'name': 'Oryza sativa Japonica Group'}], 'ancestors': [1, 2759, 3193, 3398, 4447, 4479, 4527, 4530, 4734, 33090, 35493, 38820, 58023, 58024, 78536, 131221, 131567, 147367, 147380, 359160, 1437183, 1437197, 1648021]}, 'familyRoot': {'entries': [{'_id': 4479, 'name': 'Poaceae'}], 'ancestors': [1, 2759, 3193, 3398, 4447, 4734, 33090, 35493, 38820, 58023, 58024, 78536, 131221, 131567, 1437183, 1437197]}}, 'homology': {'gene_tree': {'id': 'EPlGT00940000174412', 'root_taxon_id': 4479, 'root_taxon_name': 'Poaceae', 'representative': {'model': {'id': 'Os01g0102300', 'taxon_id': 39947, 'name': 'OsTLP27', 'description': 'Thylakoid lumen protein, Photosynthesis and chloroplast development (Os01t0102300-01)'}}}, 'homologous_genes': {'ortholog_one2one': ['ORUFI01G00160', 'BGIOSGA002584', 'ORGLA01G0001200', 'OBART01G00190', 'KN538826.1_FG009', 'OPUNC01G00160', 'OB01G10160', 'TRIDC3BG013650', 'TraesCS3A02G083000', 'BRADI_1g26880v3', 'TraesCS3D02G083100', 'TRIDC3AG009950', 'TRIUR3_06281', 'TraesCS3B02G098000', 'HORVU3Hr1G014790', 'AET3Gv20180700', 'Zm00001d008394', 'SORBI_3003G107800'], 'syntenic_ortholog_one2one': ['ONIVA09G12730', 'OGLUM01G00180', 'LPERR01G00130', 'SETIT_002757mg']}}, 'bins': {'fixed_100': 3304, 'fixed_200': 6604, 'fixed_500': 16504, 'fixed_1000': 33006, 'uniform_1Mb': 31952, 'uniform_2Mb': 16095, 'uniform_5Mb': 6596, 'uniform_10Mb': 3411}, 'species_idx': 5}, 'funricegene_genekeywords': {'Symbol': \"{'OsTLP27'}\", 'RAPdb': \"{'Os01g0102300'}\", 'MSU': \"{'LOC_Os01g01280'}\", 'Keyword': \"{'sheath', 'leaf', 'photosynthesis', 'chloroplast'}\", 'Title': \"{'Overexpression of OsTLP27 in rice improves chloroplast function and photochemical efficiency'}\"}, 'msu': {'Genomic Sequence': ' >LOC_Os01g01280 AGCAGAATCGTACGTTTGTAATGACGTCATCATTATCATCATCCACAGCCTCTGCTGCTG CTTGTTGCAAGAGTAGAAGTCGTAATCCTCCTCCGGCGCCGGCGCCACACACTAGTACTG CACGAGTAGTTCGCAGCAGCAGGCGGAGGCTTCTCTTAGTATTCTTCTCCGCAGAGGCGG CGGCGGCTGCGACGAGCGGTCTCATCCAGACCCCGTGTGGGCAAGCCTACCCTTTCGCTG GCACCAACGTGAAGAAGCCGCAGCCGCCGTCCACCCCTTACTCCCAATCCCAATCGCAGC AGCAGTTTGGCCTCGACGCCAAAGGGTAATTAACTAAACCGGCCGCCACAGATCTGGATG GATCGATCTTAAAATTAAGAAAGAGATTATATATATTATGGATGCAGGAGGATTAGGGCG TGCCCGTCGACGAACCCCGGATGCGTGTCCACAAACCCCACGGTGGGCGCATCTTGCTCC TTGGCCTCCCCGCTCATCGTCCCCGCTAATACACCAACGGACAAGGCCGCCGCTGTAAGT GTACGCACGCACGCATTTGTTATTCATTTAATATAGCAGTATTTGTTTCTGAATTAGTAA TTCGATGTGAATGAATGACAGTCGCTGCGCGAGGCTATCCTCAAGACGCAGAGGAATGCG GTGATCAAAGCCGACGAGGAGACGGCGTACGGGCACTACATCCAGGCGGAGGTCGACGGC GGCGCAGGCCGCGACGTGATGGAGTTCCTCCTCAAGGAATCCCAGTCCCAGTCCCAGGAG GTGGTGGCCGCGTACCGATGCGTCGCCACCAAGGTCATCTTCGTCTACCCCTTCACCACT GCCGTCGGCGATTCAAGAGGGCAGAGCCAGAGGATCGCCGCCGTCGCCCAGGAGCTCGGA TGGTACGCCCCGGACCTACTCAACGCCGCCACCGCCGACGACCACTCTATCCTCGACTAT TAACCAAGGCCATACATATGCTTGCTTCATTATCTCTAGTCTGTACAAGTACAACTCGTC CAAATTCATTCATCCATCCATCCATCCACGACACATATACAAATACTAATCTATTATTAC TACTAAGTAGTACTAGTAGCCACCGATATATATACACAACAAATGTATTAATCAAAATGC TAATTTATTTCTACGCCGGCCGGCGTCCTTGCACTTTTGGATGATATTGGGCCTTAATTT TCATCGTAGGTCACCGAGTTAGCCCATGCACTGTTTACTGTGTCATGAAATAAGCATGTG GGCCTCACAGGTATTTTTAATTTTTTTAACTAACACCAGCTGACAGACATGTAGGGTGCT TTTGAATTTTTTGTCCCATGTAAACATCATATGGGACCAGGGCGGATCCAGAAAAAAAAA TTGAGGGGCTTAATT ', 'CDS': ' >LOC_Os01g01280.1 ATGACGTCATCATTATCATCATCCACAGCCTCTGCTGCTGCTTGTTGCAAGAGTAGAAGT CGTAATCCTCCTCCGGCGCCGGCGCCACACACTAGTACTGCACGAGTAGTTCGCAGCAGC AGGCGGAGGCTTCTCTTAGTATTCTTCTCCGCAGAGGCGGCGGCGGCTGCGACGAGCGGT CTCATCCAGACCCCGTGTGGGCAAGCCTACCCTTTCGCTGGCACCAACGTGAAGAAGCCG CAGCCGCCGTCCACCCCTTACTCCCAATCCCAATCGCAGCAGCAGTTTGGCCTCGACGCC AAAGGGAGGATTAGGGCGTGCCCGTCGACGAACCCCGGATGCGTGTCCACAAACCCCACG GTGGGCGCATCTTGCTCCTTGGCCTCCCCGCTCATCGTCCCCGCTAATACACCAACGGAC AAGGCCGCCGCTTCGCTGCGCGAGGCTATCCTCAAGACGCAGAGGAATGCGGTGATCAAA GCCGACGAGGAGACGGCGTACGGGCACTACATCCAGGCGGAGGTCGACGGCGGCGCAGGC CGCGACGTGATGGAGTTCCTCCTCAAGGAATCCCAGTCCCAGTCCCAGGAGGTGGTGGCC GCGTACCGATGCGTCGCCACCAAGGTCATCTTCGTCTACCCCTTCACCACTGCCGTCGGC GATTCAAGAGGGCAGAGCCAGAGGATCGCCGCCGTCGCCCAGGAGCTCGGATGGTACGCC CCGGACCTACTCAACGCCGCCACCGCCGACGACCACTCTATCCTCGACTATTAA ', 'Protein': ' >LOC_Os01g01280.1 MTSSLSSSTASAAACCKSRSRNPPPAPAPHTSTARVVRSSRRRLLLVFFSAEAAAAATSG LIQTPCGQAYPFAGTNVKKPQPPSTPYSQSQSQQQFGLDAKGRIRACPSTNPGCVSTNPT VGASCSLASPLIVPANTPTDKAAASLREAILKTQRNAVIKADEETAYGHYIQAEVDGGAG RDVMEFLLKESQSQSQEVVAAYRCVATKVIFVYPFTTAVGDSRGQSQRIAAVAQELGWYA PDLLNAATADDHSILDY* '}, 'ic4r': {'Anther_Normal': {'expression_value': '0.084951'}, 'Anther_WT': {'expression_value': '0.990322'}, 'Callus_Normal': {'expression_value': '4.49617'}, 'Leaf': {'expression_value': '1.8539'}, 'Leaf_35S:OSH1_-GR+DEX_24h_r1': {'expression_value': '0.580494'}, 'Leaf_35S:OSH1_-GR+DEX_24h_r2': {'expression_value': '0.769319'}, 'Leaf_35S:OSH1_-GR+DEX_3h_r1': {'expression_value': '0.590159'}, 'Leaf_35S:OSH1_-GR+DEX_3h_r2': {'expression_value': '0.825895'}, 'Leaf_35S:OSH1_-GR+DEX_6h_r1': {'expression_value': '0.839245'}, 'Leaf_35S:OSH1_-GR+DEX_6h_r2': {'expression_value': '1.07508'}, 'Leaf_35S:OSH1_-GR+DEX_r1': {'expression_value': '0.557972'}, 'Leaf_35S:OSH1_-GR+DEX_r2': {'expression_value': '0.993924'}, 'Leaf_B8-12_r1': {'expression_value': '5.49562'}, 'Leaf_B8-12_r2': {'expression_value': '8.36197'}, 'Leaf_B8-12_r3': {'expression_value': '4.38997'}, 'Leaf_BLS256_r1': {'expression_value': '5.18061'}, 'Leaf_BLS256_r2': {'expression_value': '7.80206'}, 'Leaf_BLS256_r3': {'expression_value': '7.68717'}, 'Leaf_BLS279_r1': {'expression_value': '6.51144'}, 'Leaf_BLS279_r2': {'expression_value': '5.57001'}, 'Leaf_BLS279_r3': {'expression_value': '5.17651'}, 'Leaf_BXOR1_r1': {'expression_value': '13.7977'}, 'Leaf_BXOR1_r2': {'expression_value': '10.4784'}, 'Leaf_BXOR1_r3': {'expression_value': '7.87558'}, 'Leaf_CFBP2286_r1': {'expression_value': '8.42724'}, 'Leaf_CFBP2286_r2': {'expression_value': '14.0397'}, 'Leaf_CFBP2286_r3': {'expression_value': '9.99895'}, 'Leaf_CFBP7331_r1': {'expression_value': '8.60905'}, 'Leaf_CFBP7331_r2': {'expression_value': '13.2031'}, 'Leaf_CFBP7331_r3': {'expression_value': '12.1323'}, 'Leaf_CFBP7341_r1': {'expression_value': '6.64879'}, 'Leaf_CFBP7341_r2': {'expression_value': '8.65159'}, 'Leaf_CFBP7341_r3': {'expression_value': '10.2152'}, 'Leaf_CFBP7342_r3': {'expression_value': '9.62679'}, 'Leaf_CFBP7342_r4': {'expression_value': '6.96604'}, 'Leaf_CFBP7342_r5': {'expression_value': '11.3785'}, 'Leaf_L8_r1': {'expression_value': '7.14611'}, 'Leaf_L8_r2': {'expression_value': '4.63092'}, 'Leaf_L8_r3': {'expression_value': '8.94427'}, 'Leaf_Mock': {'expression_value': '14.1424'}, 'Leaf_Normal': {'expression_value': '56.2724'}, 'Leaf_Osbhlh148-DR_r1': {'expression_value': '12.5694'}, 'Leaf_Osbhlh148-DR_r2': {'expression_value': '11.2913'}, 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'6.53292'}, 'Shoot_MET1-2_Mm': {'expression_value': '14.7716'}, 'Shoot_MET1-2_WT': {'expression_value': '16.8822'}, 'Shoot_MET1-2_mm': {'expression_value': '15.4536'}, 'Shoot_Normal': {'expression_value': '4.57813'}, 'Shoot_WT': {'expression_value': '1.21774'}}, 'funricegene_geneinfo': {'Symbol': \"{'OsTLP27'}\", 'RAPdb': \"{'Os01g0102300'}\", 'MSU': \"{'LOC_Os01g01280'}\"}, 'embl_ebi': {'9 Davidson - anther': '0.6', '9 Davidson - callus': 'NA', '9 Davidson - carpel': 'NA', '9 Davidson - early inflorescence': '4', '9 Davidson - emerging inflorescence': '21', '9 Davidson - endosperm': '0', '9 Davidson - leaf': '56', '9 Davidson - microgametophyte vegetative cell': 'NA', '9 Davidson - pistil': '11', '9 Davidson - plant egg cell': 'NA', '9 Davidson - plant embryo': '3', '9 Davidson - pollen sperm cell': 'NA', '9 Davidson - post-flowering panicle': 'NA', '9 Davidson - pre-flowering panicle': 'NA', '9 Davidson - root': 'NA', '9 Davidson - seed': 'NA', '9 Davidson - seed 10 days after pollination': '1', '9 Davidson - seed 5 days after pollination': '6', '9 Davidson - shoot': 'NA', '7 Sakai - anther': 'NA', '7 Sakai - callus': '8', '7 Sakai - carpel': 'NA', '7 Sakai - early inflorescence': 'NA', '7 Sakai - emerging inflorescence': 'NA', '7 Sakai - endosperm': 'NA', '7 Sakai - leaf': '106', '7 Sakai - microgametophyte vegetative cell': 'NA', '7 Sakai - pistil': 'NA', '7 Sakai - plant egg cell': 'NA', '7 Sakai - plant embryo': 'NA', '7 Sakai - pollen sperm cell': 'NA', '7 Sakai - post-flowering panicle': '12', '7 Sakai - pre-flowering panicle': '19', '7 Sakai - root': '1', '7 Sakai - seed': '6', '7 Sakai - seed 10 days after pollination': 'NA', '7 Sakai - seed 5 days after pollination': 'NA', '7 Sakai - shoot': '27', '4 Zhang et al - anther': '0', '4 Zhang et al - callus': 'NA', '4 Zhang et al - carpel': '14', '4 Zhang et al - early inflorescence': 'NA', '4 Zhang et al - emerging inflorescence': 'NA', '4 Zhang et al - endosperm': 'NA', '4 Zhang et al - leaf': 'NA', '4 Zhang et al - microgametophyte vegetative cell': 'NA', '4 Zhang et al - pistil': 'NA', '4 Zhang et al - plant egg cell': 'NA', '4 Zhang et al - plant embryo': 'NA', '4 Zhang et al - pollen sperm cell': 'NA', '4 Zhang et al - post-flowering panicle': 'NA', '4 Zhang et al - pre-flowering panicle': 'NA', '4 Zhang et al - root': 'NA', '4 Zhang et al - seed': '23', '4 Zhang et al - seed 10 days after pollination': 'NA', '4 Zhang et al - seed 5 days after pollination': 'NA', '4 Zhang et al - shoot': '50', 'Anderson et al - anther': 'NA', 'Anderson et al - callus': 'NA', 'Anderson et al - carpel': 'NA', 'Anderson et al - early inflorescence': 'NA', 'Anderson et al - emerging inflorescence': 'NA', 'Anderson et al - endosperm': 'NA', 'Anderson et al - leaf': 'NA', 'Anderson et al - microgametophyte vegetative cell': '0', 'Anderson et al - pistil': 'NA', 'Anderson et al - plant egg cell': '7', 'Anderson et al - plant embryo': 'NA', 'Anderson et al - pollen sperm cell': '13', 'Anderson et al - post-flowering panicle': 'NA', 'Anderson et al - pre-flowering panicle': 'NA', 'Anderson et al - root': 'NA', 'Anderson et al - seed': 'NA', 'Anderson et al - seed 10 days after pollination': 'NA', 'Anderson et al - seed 5 days after pollination': 'NA', 'Anderson et al - shoot': 'NA'}, 'gwas_atlas': {'VarID': ['osa4980'], 'Traits': ['non photochemical quenching'], 'Species': ['Rice'], 'Position': ['chr1:129845'], 'P-values': [7.7e-07], 'R2(%)': [18.1], 'Mapped Gene(s)': ['Os01g0102300 '], 'Consequence Type(s)': ['upstream_gene_variant '], 'PMID': [29081789]}}, 'OsNippo01g011750': {'oryzabase': {'Trait Gene Id': '20924', 'CGSNL Gene Symbol': 'HAP5H', 'Gene symbol synonym(s)': 'OsHAP5H, OsNF-YC9, NF-YC9, NFYC9', 'CGSNL Gene Name': 'HAP5H SUBUNIT OF CCAAT-BOX BINDING COMPLEX', 'Gene name synonym(s)': 'NUCLEAR FACTOR-Y subunit C9, NUCLEAR FACTOR-Y subunit NF-YC9, NF-YC transcription factor 9, NF-YC subunit 9, NF-YC family 9', 'Protein Name': 'HAP5H SUBUNIT OF CCAAT-BOX BINDING COMPLEX', 'Allele': 'Oshap5h', 'Explanation': 'LOC_Os01g01290.', 'Trait Class': ' Other', 'RAP ID': 'Os01g0102400', 'MUS ID': 'LOC_Os01g01290.1', 'Gene Ontology': 'GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0005737 - cytoplasm', 'Plant Ontology': 'PO:0009089 - endosperm \\n'}, 'rapdb': {'Transcript_ID': 'Os01t0102400-01', 'Locus_ID': 'Os01g0102400', 'Description': 'Histone-fold domain containing protein.', 'CGSNL Gene Symbol': 'HAP5H', 'CGSNL Gene Name': 'HAP5H SUBUNIT OF CCAAT-BOX BINDING COMPLEX', 'Oryzabase Gene Symbol Synonym(s)': 'OsHAP5H, OsNF-YC9, NF-YC9, NFYC9', 'Oryzabase Gene Name Synonym(s)': 'NUCLEAR FACTOR-Y subunit C9, NUCLEAR FACTOR-Y subunit NF-YC9, NF-YC transcription factor 9, NF-YC subunit 9, NF-YC family 9', 'GO': 'Cellular Component: intracellular (GO:0005622), Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding (GO:0043565)', 'InterPro': 'Transcription factor CBF/NF-Y/archaeal histone (IPR003958), Histone-fold (IPR009072)', 'Transcript evidence': 'AK242226 (DDBJ, Best hit)', 'ORF evidence': 'NP_001041748.1 (RefSeq)', 'FLcDNA clone ID': 'J075175B02', 'Oryzabase Trait Gene ID': '20924\\n'}, 'gramene': {'_id': 'Os01g0102400', 'name': 'HAP5H SUBUNIT OF CCAAT-BOX BINDING COMPLEX', 'description': 'Histone-fold domain containing protein. (Os01t0102400-01)', 'biotype': 'protein_coding', 'taxon_id': 39947, 'system_name': 'oryza_sativa', 'db_type': 'core', 'gene_idx': 21, 'location': {'region': '1', 'start': 139826, 'end': 141555, 'strand': 1, 'map': 'GCA_001433935.1'}, 'xrefs': [{'db': 'CGSNL', 'ids': ['HAP5H']}, {'db': 'UniParc', 'ids': ['UPI00000ABDD0']}, {'db': 'Uniprot/SPTREMBL', 'ids': ['Q93VF0', 'A0A2H4C097']}, {'db': 'STRING', 'ids': ['39947.LOC_Os01g01290.1']}, {'db': 'EMBL', 'ids': ['AK242226']}, {'db': 'protein_id', 'ids': ['BAB64251.1', 'BAB62637.1', 'EAZ10192.1', 'BAB92139.1', 'BAF03662.1', 'BAS69932.1']}, {'db': 'RefSeq_dna', 'ids': ['XM_015766964.2', 'XM_015766966.2', 'XM_015766967.2']}, {'db': 'Oryzabase', 'ids': ['OsHAP5H']}], 'gene_structure': {'exons': [{'id': 'Os01t0102400-01.exon1', 'start': 1, 'end': 81}, {'id': 'Os01t0102400-01.exon2', 'start': 295, 'end': 1730}], 'transcripts': [{'exons': ['Os01t0102400-01.exon1', 'Os01t0102400-01.exon2'], 'length': 1517, 'exon_junctions': [81], 'cds': {'start': 112, 'end': 1377}, 'translation': {'id': 'Os01t0102400-01', 'length': 421, 'features': {'domain': {'entries': [{'name': 'PF00125', 'description': 'Histone', 'db': 'Pfam', 'interpro': 'IPR007125', 'start': 24, 'end': 106}], 'architecture': [{'root': '7125', 'start': 24, 'end': 106, 'interpro': 'IPR007125', 'name': 'Histone_H2A/H2B/H3', 'description': 'Histone H2A/H2B/H3'}], 'roots': '7125'}, 'homologous_superfamily': {'entries': [{'name': '1.10.20.10', 'description': None, 'db': 'Gene3D', 'interpro': 'IPR009072', 'start': 12, 'end': 120}, {'name': 'SSF47113', 'description': 'Histone-fold', 'db': 'SuperFamily', 'interpro': 'IPR009072', 'start': 28, 'end': 120}]}}}, 'id': 'Os01t0102400-01'}], 'canonical_transcript': 'Os01t0102400-01'}, 'annotations': {'domains': {'entries': [{'id': 'IPR007125', 'name': 'Histone_H2A/H2B/H3', 'description': 'Histone H2A/H2B/H3'}, {'id': 'IPR009072', 'name': 'Histone-fold', 'description': 'Histone-fold'}]}, 'GO': {'entries': [{'id': 'GO:0003677', 'name': 'DNA binding', 'namespace': 'molecular_function', 'def': 'Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).', 'subset': ['goslim_agr', 'goslim_aspergillus', 'goslim_candida', 'goslim_chembl', 'goslim_flybase_ribbon', 'goslim_generic', 'goslim_mouse', 'goslim_plant', 'goslim_yeast'], 'evidence_code': 'IEA'}, {'id': 'GO:0048579', 'name': 'negative regulation of long-day photoperiodism, flowering', 'namespace': 'biological_process', 'def': 'Any process that stops, prevents or reduces long-day photoperiodism, where the response associated with the photoperiodism is flowering. Flowering is defined by the switch from the vegetative to the reproductive phase.', 'subset': None, 'evidence_code': 'IBA'}, {'id': 'GO:0005634', 'name': 'nucleus', 'namespace': 'cellular_component', 'def': \"A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.\", 'subset': ['goslim_agr', 'goslim_aspergillus', 'goslim_candida', 'goslim_chembl', 'goslim_flybase_ribbon', 'goslim_generic', 'goslim_metagenomics', 'goslim_mouse', 'goslim_pir', 'goslim_plant', 'goslim_yeast'], 'evidence_code': 'IBA'}, {'id': 'GO:0046982', 'name': 'protein heterodimerization activity', 'namespace': 'molecular_function', 'def': 'Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.', 'subset': ['goslim_chembl'], 'evidence_code': 'IEA'}, {'id': 'GO:0000786', 'name': 'nucleosome', 'namespace': 'cellular_component', 'def': 'A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.', 'subset': ['goslim_pir'], 'evidence_code': 'IEA'}, {'id': 'GO:0005737', 'name': 'cytoplasm', 'namespace': 'cellular_component', 'def': 'All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.', 'subset': ['goslim_candida', 'goslim_chembl', 'goslim_generic', 'goslim_metagenomics', 'goslim_pir', 'goslim_plant', 'goslim_yeast'], 'evidence_code': 'IBA'}], 'ancestors': [785, 3674, 3676, 5488, 5515, 5575, 5622, 5623, 5694, 8150, 32991, 32993, 43226, 43227, 43228, 43229, 43231, 43232, 44422, 44424, 44427, 44446, 44464, 44815, 46983, 48519, 48580, 48581, 48583, 48585, 48586, 50789, 50793, 51093, 51239, 51241, 65007, 97159, 1901363, 2000026, 2000028, 2000241, 2000242]}, 'taxonomy': {'entries': [{'_id': 39947, 'name': 'Oryza sativa Japonica Group'}], 'ancestors': [1, 2759, 3193, 3398, 4447, 4479, 4527, 4530, 4734, 33090, 35493, 38820, 58023, 58024, 78536, 131221, 131567, 147367, 147380, 359160, 1437183, 1437197, 1648021]}, 'familyRoot': {'entries': [{'_id': 3398, 'name': 'Magnoliophyta'}], 'ancestors': [1, 2759, 3193, 33090, 35493, 58023, 58024, 78536, 131221, 131567]}}, 'homology': {'gene_tree': {'id': 'EPlGT00940000163916', 'root_taxon_id': 3398, 'root_taxon_name': 'Magnoliophyta', 'duplications': [3398, 4479, 4527, 1437183], 'representative': {'model': {'id': 'AT5G38140', 'taxon_id': 3702, 'name': 'NFYC10', 'description': 'Nuclear transcription factor Y subunit C-10'}}}, 'homologous_genes': {'ortholog_one2one': ['BGIOSGA002585', 'ORUFI01G00170', 'OBART01G00200', 'ORGLA01G0001300'], 'syntenic_ortholog_one2one': ['ONIVA09G12720'], 'within_species_paralog': ['Os01g0580400', 'Os10g0191900', 'Os05g0304800', 'Os04g0683400', 'Os08g0206500', 'Os03g0251350', 'Os06g0667100', 'Os02g0170500'], 'ortholog_one2many': ['KN538826.1_FG018', 'OB01G10170', 'Zm00001d023466', 'TanjilG_04114', 'AT5G38140', 'PGSC0003DMG400039636', 'B456_008G057500', 'DCAR_007494', 'POPTR_017G120000v3', 'fgenesh2_kg.7__3596__AT5G38140.1', 'BRADI_3g39280v3'], 'ortholog_many2many': ['LPERR06G10620', 'LPERR12G06220', 'LPERR12G06110', 'SORBI_3008G071900', 'SORBI_3007G054700', 'SETIT_012136mg', 'SETIT_022020mg', 'SORBI_3008G043000', 'Solyc11g016920.1', 'Solyc03g111460.2', 'Solyc02g021330.1', 'Solyc03g110850.1', 'Solyc03g111475.1', 'GLYMA_13G207500', 'LR48_Vigan09g211000', 'LR48_Vigan02g009500', 'GLYMA_13G207700']}}, 'bins': {'fixed_100': 3304, 'fixed_200': 6604, 'fixed_500': 16504, 'fixed_1000': 33006, 'uniform_1Mb': 31952, 'uniform_2Mb': 16095, 'uniform_5Mb': 6596, 'uniform_10Mb': 3411}, 'species_idx': 5}, 'msu': {'Genomic Sequence': ' >LOC_Os01g01290 ATCCTTGTGTCATATTGTGTTCATCTTCATACTACCAACCAATTAGTGCTAATAGGTAGC ATTTTCTGCAGTTGCAGCTCAAGTAAGGTAATGCACCTACTAGCTTATTATTCTTGTGCC TAGTATTAATTAGTTTCTATACTGGTACTTGTGAAAATTTGTGATTTGAGCGATGCTATT TGATTTGTAATTAAGCTAGCTATCTCTTTTTTCTTGGACCGCAATGTAACATCGTGTTGC TAACTTTTAAACTATAAAAGTAAGATAAAGAAGTAACAAAAGTGTGTGCTTGCTATGTAG GTCTATTATTCGGAGCAACAAAGGGAAGGAATGGAGCAAACTTTGGACGTACCTAGATCG TTGAGGCTACCGACACCAAAGGCTCAACAACAAATGGATGAATTTTGGAGGGATCGACAA AAAGAGATTGAGACAACAAAGGACTTTAGCGAGCATGCGATCCCTATGGCCCGCTTGAAG AAGATCGCATCTTCTCAAAAGGGTAACATGATGATGTCCTTTGACATGCCAGCATTCTTA TCGAAGATGTGTGAGCTCTTCGTACAAGAACTTGCTGTGCGTGCATGGGCATCTGCTCAA TCCCATAACCGTTGCATCATACTAGACACGGATATTGCTGAAGCCATTGCCTCCACAGAG TCTTATGACTTTCTTGTTGATATCCTCCATAATCACCGTGAGAAGCACAAATCCACTCCT TGTTCTACACTTACTACAAAGCGTTGTAGGTTAGTCGATCAACCTTCCACATCTCGCCCG CCCTACCAACATCAGCTGCCACTGTTTGCTCCTACATATACTCCAGCCATCCCTATTACT CCTAGTTTAATGCCACCAATTTCTCACTATATACCGTTCCAATATCCATCCTTATCACAA GAAGTGTCCACGATGATGGCTTCCGCACCCATAGTGAATAGATCAATGTTGCTCATTCAC AACATAGCAAGGGGTCTAGGCTTACAAGGAAACAATATCAGCACATTCGCCAACAATAAT ATCCCAGACAATATTATTGGTTGTAGTAGCCCCGCGGTTCTTGCAAGTATGATGAGTCCT GCTTTACTAGACGTTGCAGGGGCATCACTAAATCCGCCAAACTCTCACTCCATCTGCACG ATGAACATGATCAACTCGAGTGATCCCAGTGGATCTAGCATTGGTGACATTAATGTTGCA AATCAAGCAAGTCTTGCTCCCTCTGAACATTTTAACCCTGCTATCCTTCAAGAGTCCTCA TGTCCTTCGTTCTTATATAATAACAACAATGACACGATTGTTGTTGTACCGGAGGGTGTA GATATTAGTGGCACCATGGATGTTGCTGGTTTAGTTATCAATGGTCAAGAAGAAGAACAT GAGAGGAAAACAAATGTTGAGCAAAATGAGATATATGAAAGCATTGATATAGGAATAATC AATGCAAGTGTTGCGGATGGTAATAAATGCAGTATTAGGTGGGATGAATTAGGAACGGCC GATGATTCATTGCTAGATAAATTTTTGGAGGAGTTTCAAGCAAGAAACGACGGTGTTTTG CACAGCGGGATTGTGTTGCATGAAGACCATTCCTAGGTGACGTGATTTTAGCAAACCCAA GTAGTAGCAATGCCAATATAAGTAATTGAGTTGGCAAGTTTTGTTTATGTCTTTTGTAAG AATGAGGTTGTAACTCTTTTTCTTGTTGAATATAATGTTGTTTGTTTGGAGAGAAGAAAG TTAGTCGGAGTAAAAAAAAAAAGAAGAAG ', 'CDS': ' >LOC_Os01g01290.1 ATGGAGCAAACTTTGGACGTACCTAGATCGTTGAGGCTACCGACACCAAAGGCTCAACAA CAAATGGATGAATTTTGGAGGGATCGACAAAAAGAGATTGAGACAACAAAGGACTTTAGC GAGCATGCGATCCCTATGGCCCGCTTGAAGAAGATCGCATCTTCTCAAAAGGGTAACATG ATGATGTCCTTTGACATGCCAGCATTCTTATCGAAGATGTGTGAGCTCTTCGTACAAGAA CTTGCTGTGCGTGCATGGGCATCTGCTCAATCCCATAACCGTTGCATCATACTAGACACG GATATTGCTGAAGCCATTGCCTCCACAGAGTCTTATGACTTTCTTGTTGATATCCTCCAT AATCACCGTGAGAAGCACAAATCCACTCCTTGTTCTACACTTACTACAAAGCGTTGTAGG TTAGTCGATCAACCTTCCACATCTCGCCCGCCCTACCAACATCAGCTGCCACTGTTTGCT CCTACATATACTCCAGCCATCCCTATTACTCCTAGTTTAATGCCACCAATTTCTCACTAT ATACCGTTCCAATATCCATCCTTATCACAAGAAGTGTCCACGATGATGGCTTCCGCACCC ATAGTGAATAGATCAATGTTGCTCATTCACAACATAGCAAGGGGTCTAGGCTTACAAGGA AACAATATCAGCACATTCGCCAACAATAATATCCCAGACAATATTATTGGTTGTAGTAGC CCCGCGGTTCTTGCAAGTATGATGAGTCCTGCTTTACTAGACGTTGCAGGGGCATCACTA AATCCGCCAAACTCTCACTCCATCTGCACGATGAACATGATCAACTCGAGTGATCCCAGT GGATCTAGCATTGGTGACATTAATGTTGCAAATCAAGCAAGTCTTGCTCCCTCTGAACAT TTTAACCCTGCTATCCTTCAAGAGTCCTCATGTCCTTCGTTCTTATATAATAACAACAAT GACACGATTGTTGTTGTACCGGAGGGTGTAGATATTAGTGGCACCATGGATGTTGCTGGT TTAGTTATCAATGGTCAAGAAGAAGAACATGAGAGGAAAACAAATGTTGAGCAAAATGAG ATATATGAAAGCATTGATATAGGAATAATCAATGCAAGTGTTGCGGATGGTAATAAATGC AGTATTAGGTGGGATGAATTAGGAACGGCCGATGATTCATTGCTAGATAAATTTTTGGAG GAGTTTCAAGCAAGAAACGACGGTGTTTTGCACAGCGGGATTGTGTTGCATGAAGACCAT TCCTAG ', 'Protein': ' >LOC_Os01g01290.1 MEQTLDVPRSLRLPTPKAQQQMDEFWRDRQKEIETTKDFSEHAIPMARLKKIASSQKGNM MMSFDMPAFLSKMCELFVQELAVRAWASAQSHNRCIILDTDIAEAIASTESYDFLVDILH NHREKHKSTPCSTLTTKRCRLVDQPSTSRPPYQHQLPLFAPTYTPAIPITPSLMPPISHY IPFQYPSLSQEVSTMMASAPIVNRSMLLIHNIARGLGLQGNNISTFANNNIPDNIIGCSS PAVLASMMSPALLDVAGASLNPPNSHSICTMNMINSSDPSGSSIGDINVANQASLAPSEH FNPAILQESSCPSFLYNNNNDTIVVVPEGVDISGTMDVAGLVINGQEEEHERKTNVEQNE IYESIDIGIINASVADGNKCSIRWDELGTADDSLLDKFLEEFQARNDGVLHSGIVLHEDH S* '}, 'ic4r': {'Anther_Normal': {'expression_value': '0.761534'}, 'Anther_WT': {'expression_value': '0.12111'}, 'Callus_Normal': {'expression_value': '0.073742'}, 'Leaf': {'expression_value': '0.069402'}, 'Leaf_35S:OSH1_-GR+DEX_24h_r1': {'expression_value': '0.127778'}, 'Leaf_35S:OSH1_-GR+DEX_24h_r2': {'expression_value': '0.020935'}, 'Leaf_35S:OSH1_-GR+DEX_3h_r1': {'expression_value': '0.096994'}, 'Leaf_35S:OSH1_-GR+DEX_3h_r2': {'expression_value': '0.020484'}, 'Leaf_35S:OSH1_-GR+DEX_6h_r1': {'expression_value': '0.0'}, 'Leaf_35S:OSH1_-GR+DEX_6h_r2': {'expression_value': '0.020935'}, 'Leaf_35S:OSH1_-GR+DEX_r1': {'expression_value': '0.089963'}, 'Leaf_35S:OSH1_-GR+DEX_r2': {'expression_value': '0.106593'}, 'Leaf_B8-12_r1': {'expression_value': '0.059004'}, 'Leaf_B8-12_r2': {'expression_value': '0.142725'}, 'Leaf_B8-12_r3': {'expression_value': '0.083198'}, 'Leaf_BLS256_r1': {'expression_value': '0.085428'}, 'Leaf_BLS256_r2': {'expression_value': '0.14363'}, 'Leaf_BLS256_r3': {'expression_value': '0.14363'}, 'Leaf_BLS279_r1': {'expression_value': '0.202913'}, 'Leaf_BLS279_r2': {'expression_value': '0.0'}, 'Leaf_BLS279_r3': {'expression_value': '0.224792'}, 'Leaf_BXOR1_r1': {'expression_value': '0.55729'}, 'Leaf_BXOR1_r2': {'expression_value': '0.125511'}, 'Leaf_BXOR1_r3': {'expression_value': '0.139507'}, 'Leaf_CFBP2286_r1': {'expression_value': '0.453411'}, 'Leaf_CFBP2286_r2': {'expression_value': '0.425715'}, 'Leaf_CFBP2286_r3': {'expression_value': '0.145451'}, 'Leaf_CFBP7331_r1': {'expression_value': '0.318946'}, 'Leaf_CFBP7331_r2': {'expression_value': '0.125821'}, 'Leaf_CFBP7331_r3': {'expression_value': '0.111729'}, 'Leaf_CFBP7341_r1': {'expression_value': '0.103644'}, 'Leaf_CFBP7341_r2': {'expression_value': '0.005323'}, 'Leaf_CFBP7341_r3': {'expression_value': '0.171809'}, 'Leaf_CFBP7342_r3': {'expression_value': '0.120101'}, 'Leaf_CFBP7342_r4': {'expression_value': '0.109417'}, 'Leaf_CFBP7342_r5': {'expression_value': '0.116218'}, 'Leaf_L8_r1': {'expression_value': '0.216025'}, 'Leaf_L8_r2': {'expression_value': '0.074617'}, 'Leaf_L8_r3': {'expression_value': '0.118713'}, 'Leaf_Mock': {'expression_value': '0.234922'}, 'Leaf_Normal': {'expression_value': '0.928343'}, 'Leaf_Osbhlh148-DR_r1': {'expression_value': '0.942412'}, 'Leaf_Osbhlh148-DR_r2': {'expression_value': '0.481858'}, 'Leaf_Osbhlh148-WW_r1': {'expression_value': '1.053'}, 'Leaf_Osbhlh148-WW_r2': {'expression_value': '0.865405'}, 'Leaf_Oshsfa2e-DR_r1': {'expression_value': '0.04619'}, 'Leaf_Oshsfa2e-DR_r2': {'expression_value': '0.656206'}, 'Leaf_Oshsfa2e-WW_r1': {'expression_value': '0.542644'}, 'Leaf_Oshsfa2e-WW_r2': {'expression_value': '0.485209'}, 'Leaf_PXO99A_BLS256 Tal11b_r1': {'expression_value': '0.088846'}, 'Leaf_PXO99A_BLS256 Tal11b_r2': {'expression_value': '0.088846'}, 'Leaf_PXO99A_BLS256 Tal2a_r1': {'expression_value': '0.154119'}, 'Leaf_PXO99A_BLS256 Tal2a_r2': {'expression_value': '0.054269'}, 'Leaf_PXO99A_dTal280_r1': {'expression_value': '0.027766'}, 'Leaf_PXO99A_dTal280_r2': {'expression_value': '0.063745'}, 'Leaf_RS105_r1': {'expression_value': '0.245963'}, 'Leaf_RS105_r2': {'expression_value': '0.196995'}, 'Leaf_RS105_r3': {'expression_value': '0.072175'}, 'Leaf_T2-PiZt-11-R': {'expression_value': '0.05607'}, 'Leaf_T2-PiZt-11-S': {'expression_value': '0.092674'}, 'Leaf_T4-PiZt-11-R': {'expression_value': '0.167596'}, 'Leaf_T4-PiZt-11-S': {'expression_value': '0.173168'}, 'Leaf_T6-Pi9-R': {'expression_value': '0.175349'}, 'Leaf_T6-PiZt-11-R': {'expression_value': '0.091418'}, 'Leaf_T6-Spin1i-1-R': {'expression_value': '0.050703'}, 'Leaf_WT': {'expression_value': '0.347359'}, 'Leaf_WT-DEX_24h_r1': {'expression_value': '0.070809'}, 'Leaf_WT-DEX_24h_r2': {'expression_value': '0.0'}, 'Leaf_WT-DEX_3h_r1': {'expression_value': '0.100102'}, 'Leaf_WT-DEX_3h_r2': {'expression_value': '0.072837'}, 'Leaf_WT-DEX_6h_r1': {'expression_value': '0.100102'}, 'Leaf_WT-DEX_6h_r2': {'expression_value': '0.035352'}, 'Leaf_WT-DEX_r1': {'expression_value': '0.0'}, 'Leaf_WT-DEX_r2': {'expression_value': '0.0'}, 'Leaf_WT-DR_SRP052306_r1': {'expression_value': '0.832923'}, 'Leaf_WT-DR_SRP052306_r2': {'expression_value': '0.431075'}, 'Leaf_WT-DR_SRP052309_r1': {'expression_value': '0.832923'}, 'Leaf_WT-DR_SRP052309_r2': {'expression_value': '0.431075'}, 'Leaf_WT-DR_SRP052310_r1': {'expression_value': '0.832923'}, 'Leaf_WT-DR_SRP052310_r2': {'expression_value': '0.431075'}, 'Leaf_WT-WW_SRP052306_r1': {'expression_value': '1.55464'}, 'Leaf_WT-WW_SRP052306_r2': {'expression_value': '0.902257'}, 'Leaf_WT-WW_SRP052309_r1': {'expression_value': '1.55464'}, 'Leaf_WT-WW_SRP052309_r2': {'expression_value': '0.902257'}, 'Leaf_WT-WW_SRP052310_r1': {'expression_value': '1.55464'}, 'Leaf_WT-WW_SRP052310_r2': {'expression_value': '0.902258'}, 'Leaf_WT2007': {'expression_value': '0.174219'}, 'Leaf_WT2011': {'expression_value': '0.093384'}, 'Leaf_r1': {'expression_value': '0.573012'}, 'Leaf_r2': {'expression_value': '1.19103'}, 'Leaf_r3': {'expression_value': '0.605892'}, 'Panicle': {'expression_value': '0.070282'}, 'Panicle_Normal': {'expression_value': '0.568241'}, 'Panicle_young_0.5cm': {'expression_value': '0.087406'}, 'Pistil_Normal': {'expression_value': '0.075166'}, 'Root': {'expression_value': '0.020895'}, 'Root_-Pi_0day_r1': {'expression_value': '0.158105'}, 'Root_-Pi_0day_r2': {'expression_value': '0.158105'}, 'Root_-Pi_22day_r1': {'expression_value': '0.158105'}, 'Root_-Pi_22day_r2': {'expression_value': '0.0'}, 'Root_1h+Pi_r1': {'expression_value': '0.875988'}, 'Root_1h+Pi_r2': {'expression_value': '0.008202'}, 'Root_1h+Pi_r3': {'expression_value': '0.008202'}, 'Root_1h-Pi_r1': {'expression_value': '0.008202'}, 'Root_1h-Pi_r2': {'expression_value': '0.020876'}, 'Root_1h-Pi_r3': {'expression_value': '0.046192'}, 'Root_21d+1h+Pi_r1': {'expression_value': '0.046192'}, 'Root_21d+1h+Pi_r2': {'expression_value': '0.046192'}, 'Root_21d+1h+Pi_r3': {'expression_value': '0.006085'}, 'Root_21d+1h-Pi_r1': {'expression_value': '0.003189'}, 'Root_21d+1h-Pi_r2': {'expression_value': '0.007236'}, 'Root_21d+1h-Pi_r3': {'expression_value': '0.033041'}, 'Root_21d+1hRe_r1': {'expression_value': '0.033041'}, 'Root_21d+1hRe_r2': {'expression_value': '0.099563'}, 'Root_21d+1hRe_r3': {'expression_value': '0.133687'}, 'Root_21d+24h+Pi_r1': {'expression_value': '0.133687'}, 'Root_21d+24h+Pi_r2': {'expression_value': '0.171751'}, 'Root_21d+24h+Pi_r3': {'expression_value': '0.0'}, 'Root_21d+24h-Pi_r1': {'expression_value': '0.077682'}, 'Root_21d+24h-Pi_r2': {'expression_value': '0.053625'}, 'Root_21d+24h-Pi_r3': {'expression_value': '0.0'}, 'Root_21d+24hRe_r1': {'expression_value': '0.0'}, 'Root_21d+24hRe_r2': {'expression_value': '0.065875'}, 'Root_21d+24hRe_r3': {'expression_value': '0.065875'}, 'Root_21d+6h+Pi_r1': {'expression_value': '0.065875'}, 'Root_21d+6h+Pi_r2': {'expression_value': '0.0'}, 'Root_21d+6h+Pi_r3': {'expression_value': '0.001586'}, 'Root_21d+6h-Pi_r1': {'expression_value': '0.042434'}, 'Root_21d+6h-Pi_r2': {'expression_value': '0.002371'}, 'Root_21d+6h-Pi_r3': {'expression_value': '0.0'}, 'Root_21d+6hRe_r1': {'expression_value': '0.14843'}, 'Root_21d+6hRe_r2': {'expression_value': '0.0'}, 'Root_21d+6hRe_r3': {'expression_value': '0.0'}, 'Root_21d-Pi&3d+Pi_r1': {'expression_value': '0.0638'}, 'Root_21d-Pi&3d+Pi_r2': {'expression_value': '0.0638'}, 'Root_21d3d+Pi_r1': {'expression_value': '0.347359'}, 'Root_21d3d+Pi_r2': {'expression_value': '0.050973'}, 'Root_21d3d+Pi_r3': {'expression_value': '0.0638'}, 'Root_21d3d-Pi_r1': {'expression_value': '0.0'}, 'Root_21d3d-Pi_r2': {'expression_value': '4.95E-4'}, 'Root_21dd+Pi_r1': {'expression_value': '0.044588'}, 'Root_21dd+Pi_r2': {'expression_value': '0.030452'}, 'Root_21dd+Pi_r3': {'expression_value': '0.030452'}, 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'Shoot_As(III)_24h': {'expression_value': '0.034301'}, 'Shoot_Cd_0h_r1': {'expression_value': '0.698062'}, 'Shoot_Cd_0h_r2': {'expression_value': '0.21262'}, 'Shoot_Cd_0h_r3': {'expression_value': '0.87627'}, 'Shoot_Cd_1h_r1': {'expression_value': '0.352105'}, 'Shoot_Cd_1h_r2': {'expression_value': '0.15866'}, 'Shoot_Cd_1h_r3': {'expression_value': '0.49661'}, 'Shoot_Cd_24h_r1': {'expression_value': '0.15866'}, 'Shoot_Cd_24h_r2': {'expression_value': '0.0'}, 'Shoot_Cd_24h_r3': {'expression_value': '0.246525'}, 'Shoot_MET1-2_Mm': {'expression_value': '0.033453'}, 'Shoot_MET1-2_WT': {'expression_value': '0.0'}, 'Shoot_MET1-2_mm': {'expression_value': '0.10366'}, 'Shoot_Normal': {'expression_value': '0.011072'}, 'Shoot_WT': {'expression_value': '0.761534'}}, 'embl_ebi': {'9 Davidson - anther': '0', '9 Davidson - callus': 'NA', '9 Davidson - carpel': 'NA', '9 Davidson - early inflorescence': '0', '9 Davidson - emerging inflorescence': '0', '9 Davidson - endosperm': '68', '9 Davidson - leaf': '0', '9 Davidson - pistil': '0', '9 Davidson - plant embryo': '4', '9 Davidson - post-flowering panicle': 'NA', '9 Davidson - pre-flowering panicle': 'NA', '9 Davidson - root': 'NA', '9 Davidson - seed': 'NA', '9 Davidson - seed 10 days after pollination': '66', '9 Davidson - seed 5 days after pollination': '21', '9 Davidson - shoot': 'NA', '7 Sakai - anther': 'NA', '7 Sakai - callus': '0', '7 Sakai - carpel': 'NA', '7 Sakai - early inflorescence': 'NA', '7 Sakai - emerging inflorescence': 'NA', '7 Sakai - endosperm': 'NA', '7 Sakai - leaf': '2', '7 Sakai - pistil': 'NA', '7 Sakai - plant embryo': 'NA', '7 Sakai - post-flowering panicle': '0.8', '7 Sakai - pre-flowering panicle': '1', '7 Sakai - root': '0', '7 Sakai - seed': '79', '7 Sakai - seed 10 days after pollination': 'NA', '7 Sakai - seed 5 days after pollination': 'NA', '7 Sakai - shoot': '0', '4 Zhang et al - anther': '0', '4 Zhang et al - callus': 'NA', '4 Zhang et al - carpel': '0.7', '4 Zhang et al - early inflorescence': 'NA', '4 Zhang et al - emerging inflorescence': 'NA', '4 Zhang et al - endosperm': 'NA', '4 Zhang et al - leaf': 'NA', '4 Zhang et al - pistil': 'NA', '4 Zhang et al - plant embryo': 'NA', '4 Zhang et al - post-flowering panicle': 'NA', '4 Zhang et al - pre-flowering panicle': 'NA', '4 Zhang et al - root': 'NA', '4 Zhang et al - seed': '27', '4 Zhang et al - seed 10 days after pollination': 'NA', '4 Zhang et al - seed 5 days after pollination': 'NA', '4 Zhang et al - shoot': '0'}, 'gwas_atlas': {'VarID': ['osa5912'], 'Traits': ['total biomass yield'], 'Species': ['Rice'], 'Position': ['chr1:143282'], 'P-values': [2.4e-05], 'R2(%)': [\"'-\"], 'Mapped Gene(s)': ['Os01g0102700 Os01g0102600 Os01g0102500 Os01g0102400 '], 'Consequence Type(s)': ['upstream_gene_variant upstream_gene_variant missense_variant downstream_gene_variant '], 'PMID': [29767744]}}, 'OsNippo01g011800': {'rapdb': {'Transcript_ID': 'Os01t0102500-01', 'Locus_ID': 'Os01g0102500', 'Description': 'Conserved hypothetical protein.', 'Transcript evidence': 'AK100002 (DDBJ, Best hit)', 'ORF evidence': 'B8ACS1 (UniProt)', 'FLcDNA clone ID': 'J013135E13'}, 'gramene': {'_id': 'Os01g0102500', 'name': 'Os01g0102500', 'description': 'Conserved hypothetical protein. (Os01t0102500-01)', 'biotype': 'protein_coding', 'taxon_id': 39947, 'system_name': 'oryza_sativa', 'db_type': 'core', 'gene_idx': 22, 'location': {'region': '1', 'start': 141959, 'end': 144554, 'strand': 1, 'map': 'GCA_001433935.1'}, 'xrefs': [{'db': 'UniParc', 'ids': ['UPI00000ABCF2']}, {'db': 'Uniprot/SPTREMBL', 'ids': ['Q93VY8']}, {'db': 'RefSeq_peptide', 'ids': ['XP_015622454.1']}, {'db': 'protein_id', 'ids': ['EEE53698.1', 'BAS69933.1', 'BAB64252.1', 'BAB92140.1', 'BAB62638.1', 'BAF03663.1']}, {'db': 'RefSeq_dna', 'ids': ['XM_015766968.1', 'XM_015766968.2']}, {'db': 'EntrezGene', 'ids': ['4326468']}], 'gene_structure': {'exons': [{'id': 'Os01t0102500-01.exon1', 'start': 1, 'end': 673}, {'id': 'Os01t0102500-01.exon2', 'start': 1233, 'end': 1473}, {'id': 'Os01t0102500-01.exon3', 'start': 1605, 'end': 1722}, {'id': 'Os01t0102500-01.exon4', 'start': 1859, 'end': 2596}], 'transcripts': [{'exons': ['Os01t0102500-01.exon1', 'Os01t0102500-01.exon2', 'Os01t0102500-01.exon3', 'Os01t0102500-01.exon4'], 'length': 1770, 'exon_junctions': [673, 914, 1032], 'cds': {'start': 126, 'end': 1124}, 'translation': {'id': 'Os01t0102500-01', 'length': 332, 'features': {}}, 'id': 'Os01t0102500-01'}], 'canonical_transcript': 'Os01t0102500-01'}, 'annotations': {'GO': {'entries': [{'id': 'GO:0005337', 'name': 'nucleoside transmembrane transporter activity', 'namespace': 'molecular_function', 'def': 'Enables the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other.', 'subset': None, 'evidence_code': 'IEA'}, {'id': 'GO:0016021', 'name': 'integral component of membrane', 'namespace': 'cellular_component', 'def': 'The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.', 'subset': ['goslim_chembl'], 'evidence_code': 'IEA'}], 'ancestors': [3674, 5215, 5575, 6810, 8150, 15858, 15931, 15932, 16020, 22857, 31224, 44425, 51179, 51234, 55085, 71702, 71705, 1901264, 1901505, 1901642]}, 'taxonomy': {'entries': [{'_id': 39947, 'name': 'Oryza sativa Japonica Group'}], 'ancestors': [1, 2759, 3193, 3398, 4447, 4479, 4527, 4530, 4734, 33090, 35493, 38820, 58023, 58024, 78536, 131221, 131567, 147367, 147380, 359160, 1437183, 1437197, 1648021]}, 'familyRoot': {'entries': [{'_id': 58023, 'name': 'Tracheophyta'}], 'ancestors': [1, 2759, 3193, 33090, 35493, 131221, 131567]}}, 'homology': {'gene_tree': {'id': 'EPlGT00140000005985', 'root_taxon_id': 58023, 'root_taxon_name': 'Tracheophyta', 'duplications': [88036], 'representative': {'closest': {'id': 'AT5G13100', 'taxon_id': 3702, 'description': '/T19L5_60'}}}, 'homologous_genes': {'ortholog_one2one': ['BGIOSGA002586', 'OBART01G00210', 'ORGLA01G0001400', 'ORUFI01G00180', 'OPUNC01G00170', 'OB01G10180', 'TRIUR3_05437', 'TRIDC3BG013640', 'TRIDC3AG009920', 'TraesCS3A02G082800', 'HORVU0Hr1G006250', 'TraesCS3D02G083200', 'TraesCS3B02G097900', 'AET3Gv20180400', 'BRADI_2g03670v3', 'SORBI_3003G107700', 'GSMUA_Achr6G06070_001', 'Dr08205', 'DCAR_024659', 'Solyc05g015955.1', 'Tp57577_TGAC_v2_gene2946', 'A4A49_32334', 'HannXRQ_Chr17g0568911', 'scaffold_601319.1', 'Bo9g169050', 'g10746', 'B456_012G124400', 'PGSC0003DMG400010801', 'vigra.VC1973A.gnm6.ann1.Vradi04g10330', 'PHAVU_008G017000g', 'CCACVL1_26677', 'BVRB_6g150390', 'MTR_7g022390', 'PRUPE_1G222300', 'LR48_Vigan03g011000', 'TCM_008611', 'Csa_4G011850', 'AT5G13100', 'AMTR_s00016p00013560'], 'syntenic_ortholog_one2many': ['ONIVA09G12710'], 'ortholog_one2many': ['ONIVA07G16830', 'VIT_01s0146g00020', 'MANES_13G008600', 'TanjilG_12065', 'GSBRNA2T00135697001', 'GSBRNA2T00129906001', 'TanjilG_11939', 'GSBRNA2T00104229001', 'Bra008856', 'MANES_12G008200', 'GLYMA_18G284500', 'POPTR_001G059700v3', 'GLYMA_02G097000', 'Bra006180', 'POPTR_003G168300v3', 'VIT_01s0010g04010', 'SELMODRAFT_66188', 'SELMODRAFT_71087'], 'syntenic_ortholog_one2one': ['OGLUM01G00190', 'LPERR01G00140', 'Zm00001d040204', 'SETIT_002077mg']}}, 'bins': {'fixed_100': 3304, 'fixed_200': 6604, 'fixed_500': 16504, 'fixed_1000': 33006, 'uniform_1Mb': 31952, 'uniform_2Mb': 16095, 'uniform_5Mb': 6596, 'uniform_10Mb': 3411}, 'species_idx': 5}, 'msu': {'Genomic Sequence': ' >LOC_Os01g01295 GTGTTGTGTTGGTCTCATCGTCTGTCTCGCTCGGCGCTCGTCTTTCTCCCCTCCATTCCA TTTTTCCTTCTCCTCTTCAACCAAACGAAACCCTAGCCGCCTCCTATAGCTAAGCTAAGC TCCCTCCCCTCCTCCCTCTCATCCATCAATGGGCAAGCTCCTCTGCGACTCCTCCTCCGC CGCCGTCGCCGTCGCCGAGGCACCTTCCCCTGCCCCTGCGCCCCCGCTCCTCACCTGGCC CACCCCCGACCCCGACCCCCCGACCAGCTGGACCGCCGTCGCCGCGCTCGAGGACCAGCA GCGCCGCCGCCTCCACCGGATCTGGGAGCGCGGCGTCGCCTGGAAGCCCCCCGCCACGCT CCCGCTCCCGCCCCTCGTCTTCCGCCTTGACCACGCCGGGGAGGTCGACGCCGACGGCAA CTGCCTCTTCACCGCCGCCCGCAAGGCCGCCTCCGCCAAGCCCGACGCGCGCGACCTCAG GCACCGCATCGTCCGCCGCTTCTCCCACCTCTACGCCGCCGCCCAAGCCCCCGACAGAGA CGCCATCGATGCGGCCGTGCGCCACCTCTACGCGCCGGATCTCAAGGCCGGCTGGGGCGT CCACGTCGTGCAGGAGCTCAAGTTGCTCGCGCCCAAGACCCTGCGCCACCACCTCGACGC TGCCATCAACGACCTCGTCGACCTCGGCATCCAAAGGTTGGTTCTTATCATCAATCCACA CCCTCCCGGATCGATCCCCTCTCTCTTTTCTTTTCTTGCACCCTCTCCAATCGCGCGGAA TTTCTTTCATGCCACCTCTTGCTCCTGTTTTTTTCCCCATTGATTAATAAATCTCCTCCT TTTGCACATATCCCTACTACTATTAGCTTTACAATTACGACTTCAATTACTACTGCGCCT AGGTCCTGCCTAAATGAAATGGTCAAAGACAACGAATTTCTTTCTCTTAAAAAAAAAGTG TCACCTACGCGTATGCACATGTAGTGGGAATCAACTTGGATATCCAAAACTTCCATGCAT GTATTAGATGCTGCCTGACCTATTAGTTTTAGTATCGTCATGTTGACCACCCTGTACAGT TGTACATCTTCATCACACAAGAATCCCAAGTTGCTATGCATGTTAAACAACAATTTATGC TTCCTGCTGCAACTGTACAGTTGTAACAACCCATGGATTGGAGCCTGCTCACCAAATCAA CCTGTTTCCTACTATCCACCTCTGTATACTAGTCTTGACGTTCACTGCCTTGCAGGGAAA TGGCAGCTGAAACCATATACAGGGAGAGATGCATAGCTGTAAACAATGGAGATAGTTGGG CCAAGTACATGTCTGTCTCTGGTTCCGCAGAGGACGAGCACAACATAATCACTCTGCAGT ACACAGAGGAAGGCTTACTGACCATCGATGAGAACCGGGATGGCCATGCTGCAGCTTTTG GTGATGATATTGCTATCGAGTGCCTGGCAACCGAGTTCAAGAGAGAAGTTTATGTGGTAA AGCCCGTGTGAATGTTCTGCATGATAGTTTGCTAGTCACCATAGATCTGGCACTTTTATC TTGCATCTCTGTTTCATAGTTTTCTCAGCACTTTTATCTGCAATCTAACAGGCCCTTTTG TTTGTAGGTGCAAGCACATGGAGCGGATGCAATGGTTGATGAGGACAACTGTGTGTTCTT CCTACCACACCGCCCTAGAGGAGAAATTTGCGAGCCGCCGATTTTTCTTTTCATGAAGGG AACAGGTAACTTTGGGAATCATTTGCCCAGCAACCTAGTACGAACTGAAAATTGGTGTCT CAACAAAATTTAGTTGCTGTCTATGCTGTCAGTTGCAATGTGTCTGGACTTAAGGTAGAT GTCCAATTCTTTTTCTTGCAGCATGGTGTGGTGCTGGTGCCGACCATTATGAGCCTTTGA TAGCCACTGTCCTCCAGAATGTTACTCCAGACAAGGCAGCTGTTGTACTTTGAGGATGAC TTCCTTCTTTTTCGCTCCCCCAGTTCTAGTCACTGATGGAGTCGAGCCAATTTTGTAATC TGAGCTAGATTGCTTTATTGAGGAGCAACGTCTATGCCCAAGAGGATCTAACTGTGCGCC GCAGGGTCTTGCCTGCTTCTGAAGTTGTGTACTATGATTCGTTTTGTATGCTGATTTGAT TAGTGTGTGTTTTGATAGGTTCTGACTGTTGAGGAGGAGATTCAGAGTGTGGTAGAATAT CGGATCTAGTTTATGCTGTGAATTGTTGTGCGGCATTGTAAACCGGCATTTTGGTATTGC CTCATGCCTATTGTGAGGTTTTTTTTTTTTTTGGTTGCTTGCGTTCTAGGGACATGATTG GACATTTGAGAATGAGGATCATTCTTTTCAGTTTTGGGCTACCCGTTGTTCCAGTCCTTG CTGTTGCCACAATCTGACTGGAGCGGGGATGAATTGATTTGCAAAAGAGATGTAATACTT GTTTTCTCATGCAAATTGTACCAACATTGCAGAGGGATATGGCTGCTGTAAAAGTCTCTT CTTTCCTTTGCAAAAATAGGATCATCCTTCGTTGTATTTATAGCTTTGAACTCATTTCAT GCATGAGGAAACCATGAAAGAACGCTACTTAAGCTCGTG ', 'CDS': ' >LOC_Os01g01295.1 ATGGGCAAGCTCCTCTGCGACTCCTCCTCCGCCGCCGTCGCCGTCGCCGAGGCACCTTCC CCTGCCCCTGCGCCCCCGCTCCTCACCTGGCCCACCCCCGACCCCGACCCCCCGACCAGC TGGACCGCCGTCGCCGCGCTCGAGGACCAGCAGCGCCGCCGCCTCCACCGGATCTGGGAG CGCGGCGTCGCCTGGAAGCCCCCCGCCACGCTCCCGCTCCCGCCCCTCGTCTTCCGCCTT GACCACGCCGGGGAGGTCGACGCCGACGGCAACTGCCTCTTCACCGCCGCCCGCAAGGCC GCCTCCGCCAAGCCCGACGCGCGCGACCTCAGGCACCGCATCGTCCGCCGCTTCTCCCAC CTCTACGCCGCCGCCCAAGCCCCCGACAGAGACGCCATCGATGCGGCCGTGCGCCACCTC TACGCGCCGGATCTCAAGGCCGGCTGGGGCGTCCACGTCGTGCAGGAGCTCAAGTTGCTC GCGCCCAAGACCCTGCGCCACCACCTCGACGCTGCCATCAACGACCTCGTCGACCTCGGC ATCCAAAGGGAAATGGCAGCTGAAACCATATACAGGGAGAGATGCATAGCTGTAAACAAT GGAGATAGTTGGGCCAAGTACATGTCTGTCTCTGGTTCCGCAGAGGACGAGCACAACATA ATCACTCTGCAGTACACAGAGGAAGGCTTACTGACCATCGATGAGAACCGGGATGGCCAT GCTGCAGCTTTTGGTGATGATATTGCTATCGAGTGCCTGGCAACCGAGTTCAAGAGAGAA GTTTATGTGGTGCAAGCACATGGAGCGGATGCAATGGTTGATGAGGACAACTGTGTGTTC TTCCTACCACACCGCCCTAGAGGAGAAATTTGCGAGCCGCCGATTTTTCTTTTCATGAAG GGAACAGCATGGTGTGGTGCTGGTGCCGACCATTATGAGCCTTTGATAGCCACTGTCCTC CAGAATGTTACTCCAGACAAGGCAGCTGTTGTACTTTGA ', 'Protein': ' >LOC_Os01g01295.1 MGKLLCDSSSAAVAVAEAPSPAPAPPLLTWPTPDPDPPTSWTAVAALEDQQRRRLHRIWE RGVAWKPPATLPLPPLVFRLDHAGEVDADGNCLFTAARKAASAKPDARDLRHRIVRRFSH LYAAAQAPDRDAIDAAVRHLYAPDLKAGWGVHVVQELKLLAPKTLRHHLDAAINDLVDLG IQREMAAETIYRERCIAVNNGDSWAKYMSVSGSAEDEHNIITLQYTEEGLLTIDENRDGH AAAFGDDIAIECLATEFKREVYVVQAHGADAMVDEDNCVFFLPHRPRGEICEPPIFLFMK GTAWCGAGADHYEPLIATVLQNVTPDKAAVVL* '}, 'ic4r': {'Anther_Normal': {'expression_value': '1.71175'}, 'Anther_WT': {'expression_value': '11.5458'}, 'Callus_Normal': {'expression_value': '5.731'}, 'Leaf': {'expression_value': '1.18999'}, 'Leaf_35S:OSH1_-GR+DEX_24h_r1': {'expression_value': '27.8687'}, 'Leaf_35S:OSH1_-GR+DEX_24h_r2': {'expression_value': '21.2673'}, 'Leaf_35S:OSH1_-GR+DEX_3h_r1': {'expression_value': '30.4898'}, 'Leaf_35S:OSH1_-GR+DEX_3h_r2': {'expression_value': '25.5562'}, 'Leaf_35S:OSH1_-GR+DEX_6h_r1': {'expression_value': '22.8241'}, 'Leaf_35S:OSH1_-GR+DEX_6h_r2': {'expression_value': '21.5565'}, 'Leaf_35S:OSH1_-GR+DEX_r1': {'expression_value': '32.8102'}, 'Leaf_35S:OSH1_-GR+DEX_r2': {'expression_value': '30.1434'}, 'Leaf_B8-12_r1': {'expression_value': '5.85584'}, 'Leaf_B8-12_r2': {'expression_value': '5.97279'}, 'Leaf_B8-12_r3': {'expression_value': '5.83307'}, 'Leaf_BLS256_r1': {'expression_value': '5.47212'}, 'Leaf_BLS256_r2': {'expression_value': '5.76111'}, 'Leaf_BLS256_r3': {'expression_value': '4.97354'}, 'Leaf_BLS279_r1': {'expression_value': '6.02124'}, 'Leaf_BLS279_r2': {'expression_value': '6.03025'}, 'Leaf_BLS279_r3': {'expression_value': '5.60032'}, 'Leaf_BXOR1_r1': {'expression_value': '4.94129'}, 'Leaf_BXOR1_r2': {'expression_value': '5.79341'}, 'Leaf_BXOR1_r3': {'expression_value': '4.81607'}, 'Leaf_CFBP2286_r1': {'expression_value': '4.96762'}, 'Leaf_CFBP2286_r2': {'expression_value': '4.99357'}, 'Leaf_CFBP2286_r3': {'expression_value': '4.84161'}, 'Leaf_CFBP7331_r1': {'expression_value': '2.92882'}, 'Leaf_CFBP7331_r2': {'expression_value': '4.25515'}, 'Leaf_CFBP7331_r3': {'expression_value': '5.56157'}, 'Leaf_CFBP7341_r1': {'expression_value': '5.14737'}, 'Leaf_CFBP7341_r2': {'expression_value': '4.2733'}, 'Leaf_CFBP7341_r3': {'expression_value': '4.82457'}, 'Leaf_CFBP7342_r3': {'expression_value': '4.78023'}, 'Leaf_CFBP7342_r4': {'expression_value': '4.66645'}, 'Leaf_CFBP7342_r5': {'expression_value': '5.51835'}, 'Leaf_L8_r1': {'expression_value': '6.35822'}, 'Leaf_L8_r2': {'expression_value': '6.44628'}, 'Leaf_L8_r3': {'expression_value': '5.31248'}, 'Leaf_Mock': {'expression_value': '5.72101'}, 'Leaf_Normal': {'expression_value': '6.50468'}, 'Leaf_Osbhlh148-DR_r1': {'expression_value': '7.84874'}, 'Leaf_Osbhlh148-DR_r2': {'expression_value': '7.80653'}, 'Leaf_Osbhlh148-WW_r1': {'expression_value': '6.37917'}, 'Leaf_Osbhlh148-WW_r2': {'expression_value': '7.29301'}, 'Leaf_Oshsfa2e-DR_r1': {'expression_value': '9.47559'}, 'Leaf_Oshsfa2e-DR_r2': {'expression_value': '8.82983'}, 'Leaf_Oshsfa2e-WW_r1': {'expression_value': '6.25027'}, 'Leaf_Oshsfa2e-WW_r2': {'expression_value': '5.78097'}, 'Leaf_PXO99A_BLS256 Tal11b_r1': {'expression_value': '6.88484'}, 'Leaf_PXO99A_BLS256 Tal11b_r2': {'expression_value': '8.15999'}, 'Leaf_PXO99A_BLS256 Tal2a_r1': {'expression_value': '4.77076'}, 'Leaf_PXO99A_BLS256 Tal2a_r2': {'expression_value': '5.91812'}, 'Leaf_PXO99A_dTal280_r1': {'expression_value': '6.01415'}, 'Leaf_PXO99A_dTal280_r2': {'expression_value': '7.61142'}, 'Leaf_RS105_r1': {'expression_value': '5.38018'}, 'Leaf_RS105_r2': {'expression_value': '5.12953'}, 'Leaf_RS105_r3': {'expression_value': '5.22455'}, 'Leaf_T2-PiZt-11-R': {'expression_value': '4.59483'}, 'Leaf_T2-PiZt-11-S': {'expression_value': '4.16957'}, 'Leaf_T4-PiZt-11-R': {'expression_value': '5.00497'}, 'Leaf_T4-PiZt-11-S': {'expression_value': '4.02622'}, 'Leaf_T6-Pi9-R': {'expression_value': '4.70323'}, 'Leaf_T6-PiZt-11-R': {'expression_value': '4.63658'}, 'Leaf_T6-Spin1i-1-R': {'expression_value': '4.29146'}, 'Leaf_WT': {'expression_value': '13.9971'}, 'Leaf_WT-DEX_24h_r1': {'expression_value': '40.911'}, 'Leaf_WT-DEX_24h_r2': {'expression_value': '32.9297'}, 'Leaf_WT-DEX_3h_r1': {'expression_value': '31.1156'}, 'Leaf_WT-DEX_3h_r2': {'expression_value': '27.8813'}, 'Leaf_WT-DEX_6h_r1': {'expression_value': '30.3129'}, 'Leaf_WT-DEX_6h_r2': {'expression_value': '23.0384'}, 'Leaf_WT-DEX_r1': {'expression_value': '36.0449'}, 'Leaf_WT-DEX_r2': {'expression_value': '36.6129'}, 'Leaf_WT-DR_SRP052306_r1': {'expression_value': '12.1512'}, 'Leaf_WT-DR_SRP052306_r2': {'expression_value': '12.8552'}, 'Leaf_WT-DR_SRP052309_r1': {'expression_value': '12.1512'}, 'Leaf_WT-DR_SRP052309_r2': {'expression_value': '12.8552'}, 'Leaf_WT-DR_SRP052310_r1': {'expression_value': '12.1512'}, 'Leaf_WT-DR_SRP052310_r2': {'expression_value': '12.8552'}, 'Leaf_WT-WW_SRP052306_r1': {'expression_value': '5.76118'}, 'Leaf_WT-WW_SRP052306_r2': {'expression_value': '6.19462'}, 'Leaf_WT-WW_SRP052309_r1': {'expression_value': '5.76118'}, 'Leaf_WT-WW_SRP052309_r2': {'expression_value': '6.19462'}, 'Leaf_WT-WW_SRP052310_r1': {'expression_value': '5.76118'}, 'Leaf_WT-WW_SRP052310_r2': {'expression_value': '6.19463'}, 'Leaf_WT2007': {'expression_value': '4.86499'}, 'Leaf_WT2011': {'expression_value': '5.32292'}, 'Leaf_r1': {'expression_value': '6.49405'}, 'Leaf_r2': {'expression_value': '5.30445'}, 'Leaf_r3': {'expression_value': '4.44172'}, 'Panicle': {'expression_value': '4.09551'}, 'Panicle_Normal': {'expression_value': '7.88753'}, 'Panicle_young_0.5cm': {'expression_value': '27.3116'}, 'Pistil_Normal': {'expression_value': '3.49208'}, 'Root': {'expression_value': '8.70497'}, 'Root_-Pi_0day_r1': {'expression_value': '9.06697'}, 'Root_-Pi_0day_r2': {'expression_value': '10.5232'}, 'Root_-Pi_22day_r1': {'expression_value': '7.18181'}, 'Root_-Pi_22day_r2': {'expression_value': '7.40402'}, 'Root_1h+Pi_r1': {'expression_value': '3.72159'}, 'Root_1h+Pi_r2': {'expression_value': '2.03453'}, 'Root_1h+Pi_r3': {'expression_value': '3.97711'}, 'Root_1h-Pi_r1': {'expression_value': '4.39285'}, 'Root_1h-Pi_r2': {'expression_value': '2.69718'}, 'Root_1h-Pi_r3': {'expression_value': '2.74427'}, 'Root_21d+1h+Pi_r1': {'expression_value': '3.01903'}, 'Root_21d+1h+Pi_r2': {'expression_value': '5.02614'}, 'Root_21d+1h+Pi_r3': {'expression_value': '4.76541'}, 'Root_21d+1h-Pi_r1': {'expression_value': '6.07101'}, 'Root_21d+1h-Pi_r2': {'expression_value': '4.44765'}, 'Root_21d+1h-Pi_r3': {'expression_value': '4.48458'}, 'Root_21d+1hRe_r1': {'expression_value': '8.22694'}, 'Root_21d+1hRe_r2': {'expression_value': '7.07906'}, 'Root_21d+1hRe_r3': {'expression_value': '6.73196'}, 'Root_21d+24h+Pi_r1': {'expression_value': '2.2802'}, 'Root_21d+24h+Pi_r2': {'expression_value': '2.1297'}, 'Root_21d+24h+Pi_r3': {'expression_value': '2.70069'}, 'Root_21d+24h-Pi_r1': {'expression_value': '3.53087'}, 'Root_21d+24h-Pi_r2': {'expression_value': '3.92747'}, 'Root_21d+24h-Pi_r3': {'expression_value': '2.97059'}, 'Root_21d+24hRe_r1': {'expression_value': '3.23111'}, 'Root_21d+24hRe_r2': {'expression_value': '6.26566'}, 'Root_21d+24hRe_r3': {'expression_value': '5.43545'}, 'Root_21d+6h+Pi_r1': {'expression_value': '6.97872'}, 'Root_21d+6h+Pi_r2': {'expression_value': '1.28845'}, 'Root_21d+6h+Pi_r3': {'expression_value': '3.27994'}, 'Root_21d+6h-Pi_r1': {'expression_value': '4.57874'}, 'Root_21d+6h-Pi_r2': {'expression_value': '4.09869'}, 'Root_21d+6h-Pi_r3': {'expression_value': '5.04384'}, 'Root_21d+6hRe_r1': {'expression_value': '3.01609'}, 'Root_21d+6hRe_r2': {'expression_value': '4.67575'}, 'Root_21d+6hRe_r3': {'expression_value': '3.30463'}, 'Root_21d-Pi&3d+Pi_r1': {'expression_value': '4.71814'}, 'Root_21d-Pi&3d+Pi_r2': {'expression_value': '6.2718'}, 'Root_21d3d+Pi_r1': {'expression_value': '3.43292'}, 'Root_21d3d+Pi_r2': {'expression_value': '3.66644'}, 'Root_21d3d+Pi_r3': {'expression_value': '6.02359'}, 'Root_21d3d-Pi_r1': {'expression_value': '4.42526'}, 'Root_21d3d-Pi_r2': {'expression_value': '4.64936'}, 'Root_21dd+Pi_r1': {'expression_value': '4.16102'}, 'Root_21dd+Pi_r2': {'expression_value': '3.26966'}, 'Root_21dd+Pi_r3': {'expression_value': '3.72217'}, 'Root_21dd-Pi_r1': {'expression_value': '3.52254'}, 'Root_21dd-Pi_r2': {'expression_value': '5.29584'}, 'Root_21dd-Pi_r3': {'expression_value': '4.18078'}, 'Root_24h+Pi_r1': {'expression_value': '4.74145'}, 'Root_24h+Pi_r2': {'expression_value': '3.50453'}, 'Root_24h+Pi_r3': {'expression_value': '1.89229'}, 'Root_24h-Pi_r1': {'expression_value': '4.96949'}, 'Root_24h-Pi_r2': {'expression_value': '2.93721'}, 'Root_24h-Pi_r3': {'expression_value': '3.72447'}, 'Root_3d+Pi_r2': {'expression_value': '4.05291'}, 'Root_3d+Pi_r3': {'expression_value': '5.61655'}, 'Root_3d-Pi_r1': {'expression_value': '5.05743'}, 'Root_3d-Pi_r2': {'expression_value': '5.37089'}, 'Root_3d-Pi_r3': {'expression_value': '3.16414'}, 'Root_52d-Pi': {'expression_value': '3.41288'}, 'Root_6h+Pi_r1': {'expression_value': '3.51942'}, 'Root_6h+Pi_r2': {'expression_value': '5.35274'}, 'Root_6h+Pi_r3': {'expression_value': '4.50461'}, 'Root_6h-Pi_r1': {'expression_value': '2.30851'}, 'Root_6h-Pi_r2': {'expression_value': '7.35388'}, 'Root_6h-Pi_r3': {'expression_value': '4.15028'}, 'Root_7d+Pi_r1': {'expression_value': '3.37221'}, 'Root_7d+Pi_r2': {'expression_value': '2.85324'}, 'Root_7d+Pi_r3': {'expression_value': '3.10531'}, 'Root_7d-Pi_r1': {'expression_value': '5.13908'}, 'Root_7d-Pi_r2': {'expression_value': '3.28893'}, 'Root_7d-Pi_r3': {'expression_value': '3.34685'}, 'Root_Cd_0h_r1': {'expression_value': '9.09386'}, 'Root_Cd_0h_r2': {'expression_value': '9.16289'}, 'Root_Cd_0h_r3': {'expression_value': '7.36427'}, 'Root_Cd_1h_r1': {'expression_value': '27.1033'}, 'Root_Cd_1h_r2': {'expression_value': '24.9814'}, 'Root_Cd_1h_r3': {'expression_value': '28.1143'}, 'Root_Cd_24h_r1': {'expression_value': '27.3448'}, 'Root_DCL3a_+Pi': {'expression_value': '3.69217'}, 'Root_DCL3a_-Pi': {'expression_value': '8.58074'}, 'Root_Normal': {'expression_value': '7.26228'}, 'Root_WT_+Pi': {'expression_value': '2.80524'}, 'Root_WT_-Pi': {'expression_value': '3.0433'}, 'Seed_Normal': {'expression_value': '4.19371'}, 'Seed_OsCMT3a_WT_r1': {'expression_value': '5.02815'}, 'Seed_OsCMT3a_WT_r2': {'expression_value': '7.10586'}, 'Seed_OsCMT3a_WT_r3': {'expression_value': '5.94162'}, 'Seed_aleurone_ABA&GA_4h': {'expression_value': '8.82258'}, 'Seed_aleurone_ABA_4h': {'expression_value': '2.73449'}, 'Seed_aleurone_GA_4h': {'expression_value': '5.18651'}, 'Seed_aleurone_Mock_4h': {'expression_value': '2.89047'}, 'Seed_oscmt3a_mutant _r1': {'expression_value': '6.0134'}, 'Seed_oscmt3a_mutant _r2': {'expression_value': '5.36916'}, 'Seed_oscmt3a_mutant _r3': {'expression_value': '4.89687'}, 'Shoot_1h+Pi_r1': {'expression_value': '0.768939'}, 'Shoot_1h+Pi_r2': {'expression_value': '0.743442'}, 'Shoot_1h+Pi_r3': {'expression_value': '1.38938'}, 'Shoot_1h-Pi_r1': {'expression_value': '1.14045'}, 'Shoot_1h-Pi_r2': {'expression_value': '1.08032'}, 'Shoot_1h-Pi_r3': {'expression_value': '1.00558'}, 'Shoot_21d+1h+Pi_r1': {'expression_value': '1.64588'}, 'Shoot_21d+1h+Pi_r2': {'expression_value': '1.13892'}, 'Shoot_21d+1h+Pi_r3': {'expression_value': '1.3938'}, 'Shoot_21d+1h-Pi_r1': {'expression_value': '2.80786'}, 'Shoot_21d+1h-Pi_r2': {'expression_value': '1.98381'}, 'Shoot_21d+1h-Pi_r3': {'expression_value': '1.61962'}, 'Shoot_21d+1hRe_r1': {'expression_value': '2.6506'}, 'Shoot_21d+1hRe_r2': {'expression_value': '3.11663'}, 'Shoot_21d+1hRe_r3': {'expression_value': '2.89195'}, 'Shoot_21d+24h+Pi_r1': {'expression_value': '2.01488'}, 'Shoot_21d+24h+Pi_r2': {'expression_value': '1.35354'}, 'Shoot_21d+24h+Pi_r3': {'expression_value': '1.39786'}, 'Shoot_21d+24h-Pi_r1': {'expression_value': '2.58577'}, 'Shoot_21d+24h-Pi_r2': {'expression_value': '3.23243'}, 'Shoot_21d+24h-Pi_r3': {'expression_value': '3.18397'}, 'Shoot_21d+24hRe_r1': {'expression_value': '4.53529'}, 'Shoot_21d+24hRe_r2': {'expression_value': '5.14945'}, 'Shoot_21d+24hRe_r3': {'expression_value': '5.61649'}, 'Shoot_21d+6h+Pi_r1': {'expression_value': '1.7889'}, 'Shoot_21d+6h+Pi_r2': {'expression_value': '0.824027'}, 'Shoot_21d+6h+Pi_r3': {'expression_value': '1.2229'}, 'Shoot_21d+6h-Pi_r1': {'expression_value': '2.03524'}, 'Shoot_21d+6h-Pi_r2': {'expression_value': '2.74813'}, 'Shoot_21d+6h-Pi_r3': {'expression_value': '3.46846'}, 'Shoot_21d+6hRe_r1': {'expression_value': '3.06924'}, 'Shoot_21d+6hRe_r2': {'expression_value': '3.21297'}, 'Shoot_21d+6hRe_r3': {'expression_value': '2.63345'}, 'Shoot_21dd+Pi_r1': {'expression_value': '1.61724'}, 'Shoot_21dd+Pi_r2': {'expression_value': '1.60156'}, 'Shoot_21dd+Pi_r3': {'expression_value': '1.03954'}, 'Shoot_21dd-Pi_r1': {'expression_value': '1.56796'}, 'Shoot_21dd-Pi_r2': {'expression_value': '3.12139'}, 'Shoot_21dd-Pi_r3': {'expression_value': '1.81657'}, 'Shoot_24h+Pi_r1': {'expression_value': '1.12419'}, 'Shoot_24h+Pi_r2': {'expression_value': '1.24255'}, 'Shoot_24h+Pi_r3': {'expression_value': '1.01262'}, 'Shoot_24h-Pi_r1': {'expression_value': '1.10878'}, 'Shoot_24h-Pi_r2': {'expression_value': '1.0911'}, 'Shoot_24h-Pi_r3': {'expression_value': '0.648561'}, 'Shoot_3d+Pi_r1': {'expression_value': '1.04069'}, 'Shoot_3d+Pi_r2': {'expression_value': '1.86797'}, 'Shoot_3d+Pi_r3': {'expression_value': '1.02349'}, 'Shoot_3d-Pi_r1': {'expression_value': '1.25182'}, 'Shoot_3d-Pi_r2': {'expression_value': '1.1396'}, 'Shoot_3d-Pi_r3': {'expression_value': '0.935015'}, 'Shoot_6h+Pi_r1': {'expression_value': '1.14843'}, 'Shoot_6h+Pi_r2': {'expression_value': '2.03634'}, 'Shoot_6h+Pi_r3': {'expression_value': '2.54521'}, 'Shoot_6h-Pi_r1': {'expression_value': '3.01854'}, 'Shoot_6h-Pi_r2': {'expression_value': '2.11077'}, 'Shoot_6h-Pi_r3': {'expression_value': '2.49707'}, 'Shoot_7d+Pi_r1': {'expression_value': '0.793843'}, 'Shoot_7d+Pi_r2': {'expression_value': '2.05978'}, 'Shoot_7d+Pi_r3': {'expression_value': '1.29163'}, 'Shoot_7d-Pi_r1': {'expression_value': '0.71595'}, 'Shoot_7d-Pi_r2': {'expression_value': '1.24336'}, 'Shoot_7d-Pi_r3': {'expression_value': '1.39158'}, 'Shoot_As(III)_24h': {'expression_value': '2.08981'}, 'Shoot_Cd_0h_r1': {'expression_value': '5.9408'}, 'Shoot_Cd_0h_r2': {'expression_value': '5.38041'}, 'Shoot_Cd_0h_r3': {'expression_value': '6.52456'}, 'Shoot_Cd_1h_r1': {'expression_value': '4.81364'}, 'Shoot_Cd_1h_r2': {'expression_value': '5.5295'}, 'Shoot_Cd_1h_r3': {'expression_value': '7.16458'}, 'Shoot_Cd_24h_r1': {'expression_value': '6.90994'}, 'Shoot_Cd_24h_r2': {'expression_value': '6.69737'}, 'Shoot_Cd_24h_r3': {'expression_value': '6.75186'}, 'Shoot_MET1-2_Mm': {'expression_value': '3.30242'}, 'Shoot_MET1-2_WT': {'expression_value': '4.04668'}, 'Shoot_MET1-2_mm': {'expression_value': '8.16758'}, 'Shoot_Normal': {'expression_value': '1.29485'}, 'Shoot_WT': {'expression_value': '12.1384'}}, 'embl_ebi': {'9 Davidson - anther': '0.8', '9 Davidson - callus': 'NA', '9 Davidson - carpel': 'NA', '9 Davidson - early inflorescence': '26', '9 Davidson - emerging inflorescence': '43', '9 Davidson - endosperm': '0.5', '9 Davidson - leaf': '136', '9 Davidson - microgametophyte vegetative cell': 'NA', '9 Davidson - pistil': '11', '9 Davidson - plant egg cell': 'NA', '9 Davidson - plant embryo': '7', '9 Davidson - pollen sperm cell': 'NA', '9 Davidson - post-flowering panicle': 'NA', '9 Davidson - pre-flowering panicle': 'NA', '9 Davidson - root': 'NA', '9 Davidson - seed': 'NA', '9 Davidson - seed 10 days after pollination': '0', '9 Davidson - seed 5 days after pollination': '12', '9 Davidson - shoot': 'NA', '7 Sakai - anther': 'NA', '7 Sakai - callus': '9', '7 Sakai - carpel': 'NA', '7 Sakai - early inflorescence': 'NA', '7 Sakai - emerging inflorescence': 'NA', '7 Sakai - endosperm': 'NA', '7 Sakai - leaf': '178', '7 Sakai - microgametophyte vegetative cell': 'NA', '7 Sakai - pistil': 'NA', '7 Sakai - plant egg cell': 'NA', '7 Sakai - plant embryo': 'NA', '7 Sakai - pollen sperm cell': 'NA', '7 Sakai - post-flowering panicle': '42', '7 Sakai - pre-flowering panicle': '38', '7 Sakai - root': '9', '7 Sakai - seed': '5', '7 Sakai - seed 10 days after pollination': 'NA', '7 Sakai - seed 5 days after pollination': 'NA', '7 Sakai - shoot': '186', '4 Zhang et al - anther': '1', '4 Zhang et al - callus': 'NA', '4 Zhang et al - carpel': '15', '4 Zhang et al - early inflorescence': 'NA', '4 Zhang et al - emerging inflorescence': 'NA', '4 Zhang et al - endosperm': 'NA', '4 Zhang et al - leaf': 'NA', '4 Zhang et al - microgametophyte vegetative cell': 'NA', '4 Zhang et al - pistil': 'NA', '4 Zhang et al - plant egg cell': 'NA', '4 Zhang et al - plant embryo': 'NA', '4 Zhang et al - pollen sperm cell': 'NA', '4 Zhang et al - post-flowering panicle': 'NA', '4 Zhang et al - pre-flowering panicle': 'NA', '4 Zhang et al - root': 'NA', '4 Zhang et al - seed': '38', '4 Zhang et al - seed 10 days after pollination': 'NA', '4 Zhang et al - seed 5 days after pollination': 'NA', '4 Zhang et al - shoot': '133', 'Anderson et al - anther': 'NA', 'Anderson et al - callus': 'NA', 'Anderson et al - carpel': 'NA', 'Anderson et al - early inflorescence': 'NA', 'Anderson et al - emerging inflorescence': 'NA', 'Anderson et al - endosperm': 'NA', 'Anderson et al - leaf': 'NA', 'Anderson et al - microgametophyte vegetative cell': '0.5', 'Anderson et al - pistil': 'NA', 'Anderson et al - plant egg cell': '16', 'Anderson et al - plant embryo': 'NA', 'Anderson et al - pollen sperm cell': '0', 'Anderson et al - post-flowering panicle': 'NA', 'Anderson et al - pre-flowering panicle': 'NA', 'Anderson et al - root': 'NA', 'Anderson et al - seed': 'NA', 'Anderson et al - seed 10 days after pollination': 'NA', 'Anderson et al - seed 5 days after pollination': 'NA', 'Anderson et al - shoot': 'NA'}, 'gwas_atlas': {'VarID': ['osa5912'], 'Traits': ['total biomass yield'], 'Species': ['Rice'], 'Position': ['chr1:143282'], 'P-values': [2.4e-05], 'R2(%)': [\"'-\"], 'Mapped Gene(s)': ['Os01g0102700 Os01g0102600 Os01g0102500 Os01g0102400 '], 'Consequence Type(s)': ['upstream_gene_variant upstream_gene_variant missense_variant downstream_gene_variant '], 'PMID': [29767744]}}, 'OsNippo01g011850': {'oryzabase': {'Trait Gene Id': '11366', 'Gene symbol synonym(s)': 'OsSK4, OsSKL1', 'Gene name synonym(s)': 'Shikimate kinase 4', 'Trait Class': ' Biochemical character', 'RAP ID': 'Os01g0102600', 'MUS ID': 'LOC_Os01g01302.1', 'Gene Ontology': 'GO:0005524 - ATP binding, GO:0004765 - shikimate kinase activity'}, 'rapdb': {'Transcript_ID': 'Os01t0102600-01', 'Locus_ID': 'Os01g0102600', 'Description': 'Shikimate kinase domain containing protein.', 'Oryzabase Gene Symbol Synonym(s)': 'OsSK4, OsSKL1', 'Oryzabase Gene Name Synonym(s)': 'Shikimate kinase 4', 'GO': 'Molecular Function: shikimate kinase activity (GO:0004765), Molecular Function: ATP binding (GO:0005524)', 'InterPro': 'Shikimate kinase (IPR000623)', 'Transcript evidence': 'AK064812 (DDBJ, Best hit)', 'ORF evidence': 'NP_001150361.1 (RefSeq)', 'FLcDNA clone ID': 'J013000E05', 'Oryzabase Trait Gene ID': '11366\\n'}, 'gramene': {'_id': 'Os01g0102600', 'name': 'Shikimate kinase 4', 'description': 'Shikimate kinase domain containing protein. (Os01t0102600-01);Similar to shikimate kinase family protein. (Os01t0102600-02)', 'biotype': 'protein_coding', 'taxon_id': 39947, 'system_name': 'oryza_sativa', 'db_type': 'core', 'gene_idx': 23, 'location': {'region': '1', 'start': 145603, 'end': 147847, 'strand': 1, 'map': 'GCA_001433935.1'}, 'xrefs': [{'db': 'Oryzabase', 'ids': ['OsSK4, OsSKL1']}, {'db': 'UniParc', 'ids': ['UPI0000DD88F9']}, {'db': 'Uniprot/SPTREMBL', 'ids': ['Q0JRG4']}, {'db': 'STRING', 'ids': ['39947.LOC_Os01g01302.1']}, {'db': 'RefSeq_peptide', 'ids': ['XP_015621730.1']}, {'db': 'protein_id', 'ids': ['BAF03664.1', 'BAS69934.1', 'EEE53699.1']}, {'db': 'EMBL', 'ids': ['AK064812']}, {'db': 'KEGG_Enzyme', 'ids': ['00400+2.7.1.71']}, {'db': 'RefSeq_dna', 'ids': ['XM_015766244.1', 'XM_015766244.2']}, {'db': 'EntrezGene', 'ids': ['4326439']}], 'gene_structure': {'exons': [{'id': 'Os01t0102600-02.exon1', 'start': 1502, 'end': 1582}, {'id': 'Os01t0102600-02.exon2', 'start': 1709, 'end': 1773}, {'id': 'Os01t0102600-02.exon3', 'start': 1905, 'end': 2203}, {'id': 'Os01t0102600-01.exon1', 'start': 1, 'end': 184}, {'id': 'Os01t0102600-01.exon2', 'start': 303, 'end': 349}, {'id': 'Os01t0102600-01.exon3', 'start': 426, 'end': 480}, {'id': 'Os01t0102600-01.exon4', 'start': 577, 'end': 737}, {'id': 'Os01t0102600-01.exon5', 'start': 848, 'end': 930}, {'id': 'Os01t0102600-01.exon6', 'start': 1009, 'end': 1117}, {'id': 'Os01t0102600-01.exon7', 'start': 1504, 'end': 1582}, {'id': 'Os01t0102600-01.exon9', 'start': 1905, 'end': 2245}], 'transcripts': [{'exons': ['Os01t0102600-01.exon1', 'Os01t0102600-01.exon2', 'Os01t0102600-01.exon3', 'Os01t0102600-01.exon4', 'Os01t0102600-01.exon5', 'Os01t0102600-01.exon6', 'Os01t0102600-01.exon7', 'Os01t0102600-02.exon2', 'Os01t0102600-01.exon9'], 'length': 1124, 'exon_junctions': [184, 231, 286, 447, 530, 639, 718, 783], 'cds': {'start': 43, 'end': 852}, 'translation': {'id': 'Os01t0102600-01', 'length': 269, 'features': {'homologous_superfamily': {'entries': [{'name': 'SSF52540', 'description': 'P-loop containing nucleoside triphosphate hydrolases', 'db': 'SuperFamily', 'interpro': 'IPR027417', 'start': 77, 'end': 221}]}, 'family': {'entries': [{'name': 'PF01202', 'description': 'SKI', 'db': 'Pfam', 'interpro': 'IPR031322', 'start': 87, 'end': 214}]}}}, 'id': 'Os01t0102600-01'}, {'exons': ['Os01t0102600-02.exon1', 'Os01t0102600-02.exon2', 'Os01t0102600-02.exon3'], 'length': 445, 'exon_junctions': [81, 146], 'cds': {'start': 3, 'end': 215}, 'translation': {'id': 'Os01t0102600-02', 'length': 70, 'features': {}}, 'id': 'Os01t0102600-02'}], 'canonical_transcript': 'Os01t0102600-01'}, 'annotations': {'domains': {'entries': [{'id': 'IPR027417', 'name': 'P-loop_NTPase', 'description': 'P-loop containing nucleoside triphosphate hydrolase'}, {'id': 'IPR031322', 'name': 'Shikimate/glucono_kinase', 'description': 'Shikimate kinase/gluconokinase'}]}, 'GO': {'entries': [{'id': 'GO:0010027', 'name': 'thylakoid membrane organization', 'namespace': 'biological_process', 'def': 'A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the thylakoid membrane.', 'subset': None, 'evidence_code': 'IEA'}, {'id': 'GO:0009570', 'name': 'chloroplast stroma', 'namespace': 'cellular_component', 'def': 'The space enclosed by the double membrane of a chloroplast but excluding the thylakoid space. It contains DNA, ribosomes and some temporary products of photosynthesis.', 'subset': None, 'evidence_code': 'IEA'}, {'id': 'GO:0009658', 'name': 'chloroplast organization', 'namespace': 'biological_process', 'def': 'A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.', 'subset': None, 'evidence_code': 'IEA'}, {'id': 'GO:0004765', 'name': 'shikimate kinase activity', 'namespace': 'molecular_function', 'def': 'Catalysis of the reaction: ATP + shikimate = 3-phosphoshikimate + ADP + 2 H(+).', 'subset': None, 'evidence_code': 'IBA'}], 'ancestors': [3674, 3824, 5575, 5622, 5623, 5737, 6793, 6796, 6996, 8150, 8152, 9507, 9532, 9536, 9657, 9668, 9987, 16043, 16301, 16310, 16740, 16772, 16773, 43226, 43227, 43229, 43231, 44237, 44422, 44424, 44434, 44435, 44444, 44446, 44464, 61024, 71840]}, 'taxonomy': {'entries': [{'_id': 39947, 'name': 'Oryza sativa Japonica Group'}], 'ancestors': [1, 2759, 3193, 3398, 4447, 4479, 4527, 4530, 4734, 33090, 35493, 38820, 58023, 58024, 78536, 131221, 131567, 147367, 147380, 359160, 1437183, 1437197, 1648021]}, 'familyRoot': {'entries': [{'_id': 2759, 'name': 'Eukaryota'}], 'ancestors': [1, 131567]}}, 'homology': {'gene_tree': {'id': 'EPlGT00140000001844', 'root_taxon_id': 2759, 'root_taxon_name': 'Eukaryota', 'duplications': [3193], 'representative': {'model': {'id': 'AT3G26900', 'taxon_id': 3702, 'name': 'SKL1', 'description': 'Probable inactive shikimate kinase like 1, chloroplastic'}}}, 'homologous_genes': {'ortholog_one2one': ['BGIOSGA002587', 'ORGLA01G0001500', 'OBART01G00220', 'OPUNC01G00180', 'OB01G10190', 'TRIDC3BG013620', 'AET3Gv20180200', 'HORVU3Hr1G014780', 'TRIDC3AG009900', 'TRIUR3_05441', 'TraesCS3B02G097800', 'TraesCS3A02G082700', 'BRADI_2g03680v3', 'TraesCS3D02G083400', 'SETIT_022939mg', 'Zm00001d030688', 'SORBI_3008G134800', 'GSMUA_Achr6G10980_001', 'Dr09834', 'CCACVL1_10160', 'TanjilG_23954', 'Bo7g084000', 'MANES_11G079700', 'Tp57577_TGAC_v2_gene36708', 'MTR_6g033510', 'BVRB_6g130930', 'PRUPE_3G310900', 'g20790', 'Bra025234', 'fgenesh2_kg.5__464__AT3G26900.2', 'LR48_Vigan10g163800', 'TCM_017289', 'Solyc02g094420.3', 'AT3G26900', 'PGSC0003DMG401020240', 'PHAVU_004G081400g', 'DCAR_002948', 'HannXRQ_Chr14g0451291', 'Csa_3G509960', 'vigra.VC1973A.gnm6.ann1.Vradi01g11580', 'A4A49_07717', 'POPTR_017G062800v3', 'AMTR_s00016p00187060', 'Pp3c6_23100'], 'ortholog_one2many': ['GSBRNA2T00078088001', 'VIT_14s0068g01460', 'GSBRNA2T00139353001', 'GLYMA_02G073000', 'B456_012G083400', 'VIT_16s0039g01380', 'GLYMA_16G154300', 'B456_013G051300', 'OSTLU_10503', 'CHLRE_10g436350v5', 'CMT093C'], 'within_species_paralog': ['Os04g0640600', 'Os02g0749300', 'Os06g0225800', 'Os10g0577700'], 'ortholog_many2many': ['Gasu_30830', 'Gasu_49560']}}, 'bins': {'fixed_100': 3304, 'fixed_200': 6604, 'fixed_500': 16504, 'fixed_1000': 33006, 'uniform_1Mb': 31952, 'uniform_2Mb': 16095, 'uniform_5Mb': 6596, 'uniform_10Mb': 3411}, 'species_idx': 5}, 'msu': {'Genomic Sequence': ' >LOC_Os01g01302 CTTCGCCCTGGCCTGGCCTGGCCGGCAGCGGTGCGGTCGTGCGGATAACGAACGAACGAA GAGAAAGCATGGCAATGGCAATGGCGGCGATGAGAGGGGCGGCGGCGAGCTTGGGTCCGG GCGCTGTGTCTTGGAACTCGAAGCGCTTCTTCCTCTCCTCCTCCTCCACCACCAGCCGCC CCCATCGTCGTCGTCTACGCGCCTTCCCGAGTATCTATCTGCCCGACCCTTCCACCTCCA CCCCTTCTCTGCGCCTCTTCCGTTGCTTTCTATCTACTGTATATTAGTAATTGAACTAAC TCAGTTCGTTGTTGGGTTGGGATTGCAGGCTCGGAGCAAACTCTGGAGGAGCTTAACCCT TCCGTTGAGCTGCTCGTTCGTACCCTCTCTCCCTTCCTGCCTTCCTCTTCCTCTCTGCTG CGAACTAATAACGCGTTGCTATCCATTTCAGAGGAAAACTGCGGAGGCCGTTGGCGATTT CAGGAAAACACCCATCTACATCGTCGGTCCGTATCCTATTCCCATTCCTCTCTCTCTCTC TCTCTTTCTAATCAATCTGCCTCATTCTGCATTCATTATTATTAGTTAACGATGCATGGC AGGAACCGACTGTACTGCCAAGCGCAACATTGCAAAGCTCCTTGCCAATTCCATCATATA CCGCTACCTCTGCAGTGAAGAGCTGCTGGAGGATGTTCTTGGAGGCAAAGATGCCCTCAA TGCTTTCCGGGAATCCGACCTCAACGGCTACCTCGAAGTCGAGGTACCCTTATTTCTTCG TGTCCAACTTACTTTATCTTCCAAGTTCCAACCAATCTAGACATAGATACATCCCTTGAT TTAACACTTGTCTTCTCTTGTAAATGATGGCAGACTGAAGGCCTGAAACAGCTCACCTCC ATGGGCAGCCTCGTGCTTTGCTGTGGGGATGGTGCTGTCATGAACTCAACCAATCTGTAT GCTGCCTTCACCCACCATTCTCTCATATCTCACATCCGCCTTCTCATCAACTCTTCTTAT GCTAATTCTCTTAGAGGGCTACTGAGGCATGGAGTCTCCATTTGGATTGATATTCCTCTG GAATTGGTGGTGAATGATATGTTGAAGACACAAGCTACTTCAGACCCTGATTCCTTTTCT GAGGTTCATCTGTCCTCCTCTTGCACAATCCTCTTTAAGACTGCAACCTTCATAGTTTCT CGGTTTTTACACATAATACATATAACTCTGGCTACACTATGTCCAGCAACCCTTTATTTG TTAAACAACAATCGACTCCAGCATTTGTTAACAACAGCCTGTGAATATGTATTCAAGTAT ACTCCCTTAATAATCTTTTCCTATGTAAAACACACTGCCTCCCAAAATCCACATCCTGTT GCTTGATGCGTTGCGAGTCTAGGTTGACTCCATGGCTGGCTATATTTCTGACTTTGTCGT TGCATTAAAATGACTTTATTAAGAGCCAACTTTGTTGTCACTTGACTGCTTAATATCTGC CGGTCACATCTGAAATGTCATGTTTGCAGGCAATGAGCAGAGTCCGACAGCGACACGATG AACTAAAAGAGCGCTATGGAGTTTCTGATATAACTGTTTCAGTACAAAGTAAACAGAGAG ATGCATAAACATCATTTTCTTCCATAAAGTTGGAAAAGAAAAGGAAAAGAAAGCAAATGT TGAATTATATATATGGTTGTTGTTATTATTGACTTGGTGTTGAATACCTTTCAGATGTGG CATCTCAACTGGGCTACAGTAGCATCGACTCAGTGACCCTAGAGGACATGGTCCTTGAGG TAAATCAGTTAGATAGATAAAAGTAGTAAAAAAGATGTTGTAGAGCTGGGGAAGAAAGAA AGAAAGAAATGGGTTTTGCGAAAGAAAGAAATGTTGACAGCATTATTTTTGTGTGTATTT TGAACAACAGATTGTGAGGCAAATAGAGAGGCTGATCCGAGCGAAGTCGATGATGGAAGC TGCTGGGAAGCCCTTCTAAAAGAAGGAAGGATCCATTGATGTATAGACTGTTGGTCATGT ATGTACCTCCTGATCCCTGAGGAATTGCCTTAGATGTTCCAGGACCAGGAAGCAAAAAGT GCCGCCACAGCTACTGATTGATTAATTTTGTACCGAATGATCAATCATTCGATTGATATT TTTACATTCCCTTGTGACTTGTGAGGGAGACATATGTAGCAGAATGAAAAAGAAGTCGAA TTTATTTTCAAAAAAAGAAGCTGTGAGTGTGGCTAGAATCTACACTTGTTCATATC ', 'CDS': ' >LOC_Os01g01302.1 ATGGCAATGGCAATGGCGGCGATGAGAGGGGCGGCGGCGAGCTTGGGTCCGGGCGCTGTG TCTTGGAACTCGAAGCGCTTCTTCCTCTCCTCCTCCTCCACCACCAGCCGCCCCCATCGT CGTCGTCTACGCGCCTTCCCGAGCTCGGAGCAAACTCTGGAGGAGCTTAACCCTTCCGTT GAGCTGCTCAGGAAAACTGCGGAGGCCGTTGGCGATTTCAGGAAAACACCCATCTACATC GTCGGAACCGACTGTACTGCCAAGCGCAACATTGCAAAGCTCCTTGCCAATTCCATCATA TACCGCTACCTCTGCAGTGAAGAGCTGCTGGAGGATGTTCTTGGAGGCAAAGATGCCCTC AATGCTTTCCGGGAATCCGACCTCAACGGCTACCTCGAAGTCGAGACTGAAGGCCTGAAA CAGCTCACCTCCATGGGCAGCCTCGTGCTTTGCTGTGGGGATGGTGCTGTCATGAACTCA ACCAATCTAGGGCTACTGAGGCATGGAGTCTCCATTTGGATTGATATTCCTCTGGAATTG GTGGTGAATGATATGTTGAAGACACAAGCTACTTCAGACCCTGATTCCTTTTCTGAGGCA ATGAGCAGAGTCCGACAGCGACACGATGAACTAAAAGAGCGCTATGGAGTTTCTGATATA ACTGTTTCAGTACAAAATGTGGCATCTCAACTGGGCTACAGTAGCATCGACTCAGTGACC CTAGAGGACATGGTCCTTGAGATTGTGAGGCAAATAGAGAGGCTGATCCGAGCGAAGTCG ATGATGGAAGCTGCTGGGAAGCCCTTCTAA ', 'Protein': ' >LOC_Os01g01302.1 MAMAMAAMRGAAASLGPGAVSWNSKRFFLSSSSTTSRPHRRRLRAFPSSEQTLEELNPSV ELLRKTAEAVGDFRKTPIYIVGTDCTAKRNIAKLLANSIIYRYLCSEELLEDVLGGKDAL NAFRESDLNGYLEVETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDIPLEL VVNDMLKTQATSDPDSFSEAMSRVRQRHDELKERYGVSDITVSVQNVASQLGYSSIDSVT LEDMVLEIVRQIERLIRAKSMMEAAGKPF* '}, 'ic4r': {'Anther_Normal': {'expression_value': '0.176379'}, 'Anther_WT': {'expression_value': '7.13454'}, 'Callus_Normal': {'expression_value': '3.41396'}, 'Leaf': {'expression_value': '16.5766'}, 'Leaf_35S:OSH1_-GR+DEX_24h_r1': {'expression_value': '11.3119'}, 'Leaf_35S:OSH1_-GR+DEX_24h_r2': {'expression_value': '12.0669'}, 'Leaf_35S:OSH1_-GR+DEX_3h_r1': {'expression_value': '14.5802'}, 'Leaf_35S:OSH1_-GR+DEX_3h_r2': {'expression_value': '15.2005'}, 'Leaf_35S:OSH1_-GR+DEX_6h_r1': {'expression_value': '12.1221'}, 'Leaf_35S:OSH1_-GR+DEX_6h_r2': {'expression_value': '12.7888'}, 'Leaf_35S:OSH1_-GR+DEX_r1': {'expression_value': '11.7231'}, 'Leaf_35S:OSH1_-GR+DEX_r2': {'expression_value': '14.4704'}, 'Leaf_B8-12_r1': {'expression_value': '42.3778'}, 'Leaf_B8-12_r2': {'expression_value': '44.0994'}, 'Leaf_B8-12_r3': {'expression_value': '33.926'}, 'Leaf_BLS256_r1': {'expression_value': '33.2188'}, 'Leaf_BLS256_r2': {'expression_value': '32.4727'}, 'Leaf_BLS256_r3': {'expression_value': '46.803'}, 'Leaf_BLS279_r1': {'expression_value': '67.1529'}, 'Leaf_BLS279_r2': {'expression_value': '42.6771'}, 'Leaf_BLS279_r3': {'expression_value': '36.8805'}, 'Leaf_BXOR1_r1': {'expression_value': '117.032'}, 'Leaf_BXOR1_r2': {'expression_value': '42.5978'}, 'Leaf_BXOR1_r3': {'expression_value': '43.8189'}, 'Leaf_CFBP2286_r1': {'expression_value': '99.7363'}, 'Leaf_CFBP2286_r2': {'expression_value': '49.6513'}, 'Leaf_CFBP2286_r3': {'expression_value': '61.0729'}, 'Leaf_CFBP7331_r1': {'expression_value': '75.4179'}, 'Leaf_CFBP7331_r2': {'expression_value': '30.0676'}, 'Leaf_CFBP7331_r3': {'expression_value': '45.8209'}, 'Leaf_CFBP7341_r1': {'expression_value': '46.8941'}, 'Leaf_CFBP7341_r2': {'expression_value': '52.85'}, 'Leaf_CFBP7341_r3': {'expression_value': '39.395'}, 'Leaf_CFBP7342_r3': {'expression_value': '69.416'}, 'Leaf_CFBP7342_r4': {'expression_value': '24.7834'}, 'Leaf_CFBP7342_r5': {'expression_value': '40.8015'}, 'Leaf_L8_r1': {'expression_value': '88.5426'}, 'Leaf_L8_r2': {'expression_value': '27.2011'}, 'Leaf_L8_r3': {'expression_value': '68.6667'}, 'Leaf_Mock': {'expression_value': '106.756'}, 'Leaf_Normal': {'expression_value': '71.3383'}, 'Leaf_Osbhlh148-DR_r1': {'expression_value': '7.39899'}, 'Leaf_Osbhlh148-DR_r2': {'expression_value': '8.14137'}, 'Leaf_Osbhlh148-WW_r1': {'expression_value': '121.244'}, 'Leaf_Osbhlh148-WW_r2': {'expression_value': '139.696'}, 'Leaf_Oshsfa2e-DR_r1': {'expression_value': '7.54472'}, 'Leaf_Oshsfa2e-DR_r2': {'expression_value': '14.8823'}, 'Leaf_Oshsfa2e-WW_r1': {'expression_value': '87.8663'}, 'Leaf_Oshsfa2e-WW_r2': {'expression_value': '89.0405'}, 'Leaf_PXO99A_BLS256 Tal11b_r1': {'expression_value': '17.7672'}, 'Leaf_PXO99A_BLS256 Tal11b_r2': {'expression_value': '23.2783'}, 'Leaf_PXO99A_BLS256 Tal2a_r1': {'expression_value': '29.9308'}, 'Leaf_PXO99A_BLS256 Tal2a_r2': {'expression_value': '31.5793'}, 'Leaf_PXO99A_dTal280_r1': {'expression_value': '13.8187'}, 'Leaf_PXO99A_dTal280_r2': {'expression_value': '16.4212'}, 'Leaf_RS105_r1': {'expression_value': '76.3852'}, 'Leaf_RS105_r2': {'expression_value': '44.5684'}, 'Leaf_RS105_r3': {'expression_value': '72.965'}, 'Leaf_T2-PiZt-11-R': {'expression_value': '61.4812'}, 'Leaf_T2-PiZt-11-S': {'expression_value': '65.7055'}, 'Leaf_T4-PiZt-11-R': 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'Shoot_MET1-2_mm': {'expression_value': '45.6346'}, 'Shoot_Normal': {'expression_value': '16.8651'}, 'Shoot_WT': {'expression_value': '8.43195'}}, 'funricegene_geneinfo': {'Symbol': \"{'OsSK4|OsSKL1'}\", 'RAPdb': \"{'Os01g0102600'}\", 'MSU': \"{'LOC_Os01g01302'}\"}, 'gwas_atlas': {'VarID': ['osa5912'], 'Traits': ['total biomass yield'], 'Species': ['Rice'], 'Position': ['chr1:143282'], 'P-values': [2.4e-05], 'R2(%)': [\"'-\"], 'Mapped Gene(s)': ['Os01g0102700 Os01g0102600 Os01g0102500 Os01g0102400 '], 'Consequence Type(s)': ['upstream_gene_variant upstream_gene_variant missense_variant downstream_gene_variant '], 'PMID': [29767744]}}, 'OsNippo01g011900': {'rapdb': {'Transcript_ID': 'Os01t0102700-01', 'Locus_ID': 'Os01g0102700', 'Description': 'Translocon-associated beta family protein.', 'GO': 'Cellular Component: endoplasmic reticulum (GO:0005783), Cellular Component: integral to membrane (GO:0016021)', 'InterPro': 'Translocon-associated beta (IPR008856)', 'Transcript evidence': 'AK063774 (DDBJ, Best hit), AK099081 (DDBJ, Best hit), AK099360 (DDBJ, Best hit)', 'ORF evidence': 'B7ENG6 (UniProt)', 'FLcDNA clone ID': '001-121-C11, J023002L13, J033046F10'}, 'gramene': {'_id': 'Os01g0102700', 'name': 'Os01g0102700', 'description': 'Translocon-associated beta family protein. (Os01t0102700-01)', 'biotype': 'protein_coding', 'taxon_id': 39947, 'system_name': 'oryza_sativa', 'db_type': 'core', 'gene_idx': 24, 'location': {'region': '1', 'start': 148085, 'end': 150568, 'strand': 1, 'map': 'GCA_001433935.1'}, 'xrefs': [{'db': 'STRING', 'ids': ['39947.LOC_Os01g01307.1']}, {'db': 'protein_id', 'ids': ['BAF03665.1', 'BAS69936.1']}, {'db': 'UniParc', 'ids': ['UPI0000DD88FA']}, {'db': 'Uniprot/SPTREMBL', 'ids': ['Q0JRG3']}, {'db': 'RefSeq_dna', 'ids': ['XM_015766246.2']}], 'gene_structure': {'exons': [{'id': 'Os01t0102700-01.exon1', 'start': 1, 'end': 229}, {'id': 'Os01t0102700-01.exon2', 'start': 1366, 'end': 1464}, {'id': 'Os01t0102700-01.exon3', 'start': 1550, 'end': 1658}, {'id': 'Os01t0102700-01.exon4', 'start': 1772, 'end': 1847}, {'id': 'Os01t0102700-01.exon5', 'start': 2068, 'end': 2484}], 'transcripts': [{'exons': ['Os01t0102700-01.exon1', 'Os01t0102700-01.exon2', 'Os01t0102700-01.exon3', 'Os01t0102700-01.exon4', 'Os01t0102700-01.exon5'], 'length': 930, 'exon_junctions': [229, 328, 437, 513], 'cds': {'start': 63, 'end': 680}, 'translation': {'id': 'Os01t0102700-01', 'length': 205, 'features': {}}, 'id': 'Os01t0102700-01'}], 'canonical_transcript': 'Os01t0102700-01'}, 'annotations': {'GO': {'entries': [{'id': 'GO:0005789', 'name': 'endoplasmic reticulum membrane', 'namespace': 'cellular_component', 'def': 'The lipid bilayer surrounding the endoplasmic reticulum.', 'subset': None, 'evidence_code': 'IEA'}, {'id': 'GO:0016021', 'name': 'integral component of membrane', 'namespace': 'cellular_component', 'def': 'The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.', 'subset': ['goslim_chembl'], 'evidence_code': 'IEA'}, {'id': 'GO:0005524', 'name': 'ATP binding', 'namespace': 'molecular_function', 'def': \"Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.\", 'subset': None, 'evidence_code': 'IEA'}, {'id': 'GO:0006613', 'name': 'cotranslational protein targeting to membrane', 'namespace': 'biological_process', 'def': 'The targeting of proteins to a membrane that occurs during translation. The transport of most secretory proteins, particularly those with more than 100 amino acids, into the endoplasmic reticulum lumen occurs in this manner, as does the import of some proteins into mitochondria.', 'subset': None, 'evidence_code': 'IBA'}], 'ancestors': [166, 3674, 5488, 5575, 5622, 5623, 5737, 5783, 6605, 6612, 6810, 6886, 8104, 8144, 8150, 12505, 15031, 15833, 16020, 17076, 30554, 31224, 32553, 32555, 32559, 33036, 34613, 35639, 36094, 42175, 42886, 43167, 43168, 43226, 43227, 43229, 43231, 44422, 44424, 44425, 44432, 44444, 44446, 44464, 45184, 46907, 51179, 51234, 51641, 51649, 70727, 71702, 71705, 72657, 90150, 97159, 97367, 1901265, 1901363]}, 'taxonomy': {'entries': [{'_id': 39947, 'name': 'Oryza sativa Japonica Group'}], 'ancestors': [1, 2759, 3193, 3398, 4447, 4479, 4527, 4530, 4734, 33090, 35493, 38820, 58023, 58024, 78536, 131221, 131567, 147367, 147380, 359160, 1437183, 1437197, 1648021]}, 'familyRoot': {'entries': [{'_id': 2759, 'name': 'Eukaryota'}], 'ancestors': [1, 131567]}}, 'homology': {'gene_tree': {'id': 'EPlGT00140000004489', 'root_taxon_id': 2759, 'root_taxon_name': 'Eukaryota', 'duplications': [214687], 'representative': {'model': {'id': 'Os01g0102700', 'taxon_id': 39947, 'description': 'Translocon-associated beta family protein. (Os01t0102700-01)'}}}, 'homologous_genes': {'ortholog_one2one': ['SORBI_3008G134900', 'Zm00001d041569', 'TraesCS3A02G082100', 'SETIT_024699mg', 'TraesCS3D02G082300', 'BRADI_2g03687v3', 'TraesCS3B02G097200', 'OPUNC01G00190', 'AET3Gv20179400', 'TRIUR3_08321', 'TRIDC3BG013550', 'TRIDC3AG009800', 'ORGLA01G0001600', 'OB01G10200', 'HORVU3Hr1G014730'], 'syntenic_ortholog_one2one': ['ONIVA09G12700'], 'within_species_paralog': ['Os05g0103100'], 'ortholog_many2many': ['GSMUA_Achr3G02310_001', 'GSMUA_Achr10G18470_001', 'GSMUA_Achr2G21470_001', 'GSBRNA2T00140368001', 'POPTR_001G323400v3', 'Bra023445', 'TanjilG_17553', 'GSBRNA2T00135627001', 'GSBRNA2T00031581001', 'A4A49_38817', 'POPTR_017G061900v3', 'VIT_09s0054g00420', 'B456_012G083000', 'GSBRNA2T00040433001', 'Bo9g166220', 'GLYMA_16G050800', 'Bra008785', 'Bo2g011640', 'B456_001G273900', 'BVRB_6g152120', 'TanjilG_17552', 'MANES_04G091200', 'B456_011G087400', 'VIT_14s0068g01370', 'Solyc02g094440.3', 'GSBRNA2T00151864001', 'Bo3g009560', 'Solyc03g097750.3', 'GSBRNA2T00143343001', 'A4A49_19832', 'MANES_11G078900', 'BVRB_6g152130', 'B456_006G000600', 'GLYMA_19G099900', 'GSBRNA2T00129961001', 'HannXRQ_Chr15g0475771', 'Bo00285s560', 'TanjilG_06090', 'Bra006233', 'GSBRNA2T00056204001', 'PGSC0003DMG400019852', 'PGSC0003DMG400020198', 'Bra032955', 'HannXRQ_Chr17g0550841', 'SELMODRAFT_109700', 'SELMODRAFT_138003', 'WBGene00010678', 'WBGene00020216'], 'ortholog_one2many': ['MTR_7g083560', 'LR48_Vigan03g172900', 'PHAVU_001G087200g', 'TCM_017300', 'g19294', 'vigra.VC1973A.gnm6.ann1.Vradi04g04910', 'Csa_3G597330', 'Tp57577_TGAC_v2_gene5764', 'scaffold_601416.1', 'CCACVL1_10146', 'DCAR_021812', 'AT5G14030', 'PRUPE_3G311500', 'AMTR_s00016p00171940', 'CHLRE_05g244950v5', 'FBgn0011016', 'ENSG00000163479']}}, 'bins': {'fixed_100': 3304, 'fixed_200': 6604, 'fixed_500': 16504, 'fixed_1000': 33006, 'uniform_1Mb': 31952, 'uniform_2Mb': 16095, 'uniform_5Mb': 6596, 'uniform_10Mb': 3411}, 'species_idx': 5}, 'msu': {'Genomic Sequence': ' >LOC_Os01g01307 TTGACATACTAGTAGTAGTAGTACTAGTACACGAGGAGAAGAAGCAAGAGGAAGGGCATC CAGAATCAGATCCACAAGGCAGCAGCTGCAGCAGCATCGACCATGGCGATGGCGCGATCC ATCCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCTCCGCCTCCGCCGACGCGCCCTTCCTC GTCGCGCACAAGAAGGTTTCGCTCTCCCGCCCCAAGCCTGGCGTCGAGCGCCTCGCCGTC TCCCTCGACCTCTACAACCAGGGATCCGCGTAACTACTCTCCTCTCCTCCTCCTCCTCCT CCTCCGATCTCTCCTCTCCTCTCCTCGTTGTTGCAAGGGAACTTCACTTGTCTTTTTCTT CTCGGATCTGCATCTGAGGATCCGTCCTCTATTTCTATAGATAGATCCAGACCCCTTCCA TGTCGTAATTGCCAACTAATCAACCATTACTCTGCTACTGCTTTCTTTTCTACGCTTAAA ACAAACAAGCAATTAACTAGAAAGCCAAAAGATTCACTGCATATGCTAGTATCTTTAAAT TGCATGGGCTTGTGCTCCATCTCATCATCTACTGTTATGTCTTTCTTGCCAGATTATGTT ATGCTAATAGGATTCTACTTGTAATAAACCACACATGGTTTAGCCTATTTACAATGGTTT CACTCTCTGTTATATTCGCCTTATTTTGCTGAAATTACATACTAGGTGACTTGCCAGCTT ATTCACCCTATGCCTTTTTTGTTCCCTCCATATGTTCTTACAATGCCTGCTATCAACATT TCTCTCTCTCAAGTCCAAACTTTTCCATGCTGCCCAAAGCACCAGCTTTGCCCAAAACTA ACAACTTAACTTTCTTCCCCGAGAAGTAATAACAATTTCAAGCTAAAGTTGGTAGTTCGG ACACAACAACATAACTGACTCTTTTTATGTACAGAAATATGGATTATTGCTAAATTTTAG CTTGGAATTATTTACTGGATCTTGGTGGAAATTCTGTTAAAGATTAGCTTAGCAGCCCAT GGAGAATGAGAATGTTTTAAATATTATTTTTGCCAGTGTTTACCTGGACACCAACACAGG CCTCAAACTCTGCCTTGGATTCGCGTGTCTGATTCGGCAGAAAAGAATTGTACATGCAAC GGGTGCCCGAATCCTACTCAGACTCAGGATGTCAGACTCGACAAAAAAACATCTGCCATT CTGATATGATGTCAAAGGGTGTTCTGGTTTATCTATTCTTTTCCCTGAAAGTGCATTACC TATAGACTACAGTTGCATTAAATTGCCAAAATCTGCCATTGTTTTTCTTTTCCTATTTTG GATTAGTTTACTTTCTCTATGTGATATGATGGCAAGCAACTATGTATATCACATAGTAAT AAACTGACCGTAAAATTTATTGCAGAACTGCCTATGATGTGAGCATTAATGATGATACTT GGCCAAAGGAGGCATTTGAGCTTGTCTCTGGAGAGATGTCAAAGACATTGGAAAGGCTTG ACCCGTGAGTGCATTTCATGCAGCATCTCTCTGCTATGTGATTCATTATAAGGTGTTACA GGAAATGACTTTATCTTTGTTGCTTCTAGTGGTGTCACTGCTTCGCATGCATTTGTCTTG GAGACCAAAGTACAGGGCAGGTTTCAAGGTTCACCTGCGGTTATTACCTATCGTGTTCCC ACAAAGGCTGCGCTTCAGGTTTAATCTGTTACACTTACACACTTTTTTAAAACTTCAGCT CTTTTTTTTTTAAAGAAAAATGCTGTTCTGCTATGCTTGCAATTGCTCAATTTTTTTTTT GTATGGTGAAGGAGGCCTATTCAACCCCCATCCTTGCACTTGATGTTCTTGCTGAGAGGC CTCCAGAAAAGAAGTTTGAATGGGTAAGTAATTGTGCCATTGCATGTACATTCTAGTCTG TTTCGCTCTATGATCCTAATGTGCTGATGCTGTTTATGTTTCTGGCATGCGCCGTGTATG AATTCTTGATGTTCTCTCCTTGTTGGTTCAGGCTAAGGTAAATTTACTCTTTGTTTTATT CTACAAGGAGCAACTTTTCTAGTGCATCTATGGTAGAAGAAATTACTGAGAAATTATCCA TTTGCAGAGGCTTGTGGCGAAGTACGGGTCGCTGGTGTCCGTTGTTGGCTTGGTTGGAGT GTTTATCTACCTGGTTGCAAGCCCGTCAAAATCCAGCGGTGCAAAAGCAAGCAAGAAGAG GCGTTGATATACTTGCCTACCATATATAAGGCAGTGTTTGTTCTTTTTTATTAAAAAGAG GAAGAGATGGTGGCAGGTTTTTTAGATTGATAGCGCGAGAGCTTTAAGGCTGCCGCATCC TTGAACTGTATGAATTTTCTCTGTTTGTGTTTTTGGAAGTTGAAAACCTAACCCAGAGAA TTGGAGAGTAGATTTTGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTGCCTGATA CAGATACCTATTCATTGCATTTGGTAACAGATGAAATCTCAATGCATCATTTTGAAGTTG CCTGATACAGATA ', 'CDS': ' >LOC_Os01g01307.1 ATGGCGATGGCGCGATCCATCCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCTCCGCCTCC GCCGACGCGCCCTTCCTCGTCGCGCACAAGAAGGTTTCGCTCTCCCGCCCCAAGCCTGGC GTCGAGCGCCTCGCCGTCTCCCTCGACCTCTACAACCAGGGATCCGCAACTGCCTATGAT GTGAGCATTAATGATGATACTTGGCCAAAGGAGGCATTTGAGCTTGTCTCTGGAGAGATG TCAAAGACATTGGAAAGGCTTGACCCTGGTGTCACTGCTTCGCATGCATTTGTCTTGGAG ACCAAAGTACAGGGCAGGTTTCAAGGTTCACCTGCGGTTATTACCTATCGTGTTCCCACA AAGGCTGCGCTTCAGGAGGCCTATTCAACCCCCATCCTTGCACTTGATGTTCTTGCTGAG AGGCCTCCAGAAAAGAAGTTTGAATGGGTAAAGGCTTGTGGCGAAGTACGGGTCGCTGGT GTCCGTTGTTGGCTTGGTTGGAGTGTTTATCTACCTGGTTGCAAGCCCGTCAAAATCCAG CGGTGCAAAAGCAAGCAAGAAGAGGCGTTGATATACTTGCCTACCATATATAAGGCAGTG TTTGTTCTTTTTTATTAA ', 'Protein': ' >LOC_Os01g01307.1 MAMARSILLLLLLAAAASASADAPFLVAHKKVSLSRPKPGVERLAVSLDLYNQGSATAYD VSINDDTWPKEAFELVSGEMSKTLERLDPGVTASHAFVLETKVQGRFQGSPAVITYRVPT KAALQEAYSTPILALDVLAERPPEKKFEWVKACGEVRVAGVRCWLGWSVYLPGCKPVKIQ RCKSKQEEALIYLPTIYKAVFVLFY* '}, 'ic4r': {'Anther_Normal': {'expression_value': '6.57366'}, 'Anther_WT': {'expression_value': '73.989'}, 'Callus_Normal': {'expression_value': '29.2168'}, 'Leaf': {'expression_value': '4.23802'}, 'Leaf_35S:OSH1_-GR+DEX_24h_r1': {'expression_value': '74.9604'}, 'Leaf_35S:OSH1_-GR+DEX_24h_r2': {'expression_value': '68.5855'}, 'Leaf_35S:OSH1_-GR+DEX_3h_r1': {'expression_value': '77.3823'}, 'Leaf_35S:OSH1_-GR+DEX_3h_r2': {'expression_value': '80.3985'}, 'Leaf_35S:OSH1_-GR+DEX_6h_r1': {'expression_value': '76.7011'}, 'Leaf_35S:OSH1_-GR+DEX_6h_r2': {'expression_value': '77.0139'}, 'Leaf_35S:OSH1_-GR+DEX_r1': {'expression_value': '70.2858'}, 'Leaf_35S:OSH1_-GR+DEX_r2': {'expression_value': '87.4013'}, 'Leaf_B8-12_r1': {'expression_value': '69.864'}, 'Leaf_B8-12_r2': {'expression_value': '67.4564'}, 'Leaf_B8-12_r3': {'expression_value': '67.9219'}, 'Leaf_BLS256_r1': {'expression_value': '75.4413'}, 'Leaf_BLS256_r2': {'expression_value': '68.4118'}, 'Leaf_BLS256_r3': {'expression_value': '68.1744'}, 'Leaf_BLS279_r1': {'expression_value': '58.5612'}, 'Leaf_BLS279_r2': {'expression_value': '68.6159'}, 'Leaf_BLS279_r3': {'expression_value': '69.6156'}, 'Leaf_BXOR1_r1': {'expression_value': '33.7844'}, 'Leaf_BXOR1_r2': {'expression_value': '57.8045'}, 'Leaf_BXOR1_r3': {'expression_value': '57.6123'}, 'Leaf_CFBP2286_r1': {'expression_value': '45.9823'}, 'Leaf_CFBP2286_r2': {'expression_value': '54.0457'}, 'Leaf_CFBP2286_r3': {'expression_value': '62.2737'}, 'Leaf_CFBP7331_r1': {'expression_value': '41.981'}, 'Leaf_CFBP7331_r2': {'expression_value': '55.3458'}, 'Leaf_CFBP7331_r3': {'expression_value': '53.7138'}, 'Leaf_CFBP7341_r1': {'expression_value': '53.5674'}, 'Leaf_CFBP7341_r2': {'expression_value': '52.8065'}, 'Leaf_CFBP7341_r3': {'expression_value': '48.4944'}, 'Leaf_CFBP7342_r3': {'expression_value': '50.1415'}, 'Leaf_CFBP7342_r4': {'expression_value': '57.7583'}, 'Leaf_CFBP7342_r5': {'expression_value': '60.2924'}, 'Leaf_L8_r1': {'expression_value': '50.5278'}, 'Leaf_L8_r2': {'expression_value': '68.1304'}, 'Leaf_L8_r3': {'expression_value': '56.9605'}, 'Leaf_Mock': {'expression_value': '31.5756'}, 'Leaf_Normal': {'expression_value': '21.8583'}, 'Leaf_Osbhlh148-DR_r1': {'expression_value': '45.1876'}, 'Leaf_Osbhlh148-DR_r2': {'expression_value': '57.9138'}, 'Leaf_Osbhlh148-WW_r1': {'expression_value': '26.5938'}, 'Leaf_Osbhlh148-WW_r2': {'expression_value': '29.1385'}, 'Leaf_Oshsfa2e-DR_r1': {'expression_value': '71.1397'}, 'Leaf_Oshsfa2e-DR_r2': {'expression_value': '45.9079'}, 'Leaf_Oshsfa2e-WW_r1': {'expression_value': '32.4164'}, 'Leaf_Oshsfa2e-WW_r2': {'expression_value': '33.3911'}, 'Leaf_PXO99A_BLS256 Tal11b_r1': {'expression_value': '63.1687'}, 'Leaf_PXO99A_BLS256 Tal11b_r2': {'expression_value': '65.6644'}, 'Leaf_PXO99A_BLS256 Tal2a_r1': {'expression_value': '48.9881'}, 'Leaf_PXO99A_BLS256 Tal2a_r2': {'expression_value': '37.8676'}, 'Leaf_PXO99A_dTal280_r1': {'expression_value': '25.4182'}, 'Leaf_PXO99A_dTal280_r2': {'expression_value': '29.9339'}, 'Leaf_RS105_r1': {'expression_value': '47.1364'}, 'Leaf_RS105_r2': {'expression_value': '62.5146'}, 'Leaf_RS105_r3': {'expression_value': '52.185'}, 'Leaf_T2-PiZt-11-R': {'expression_value': '42.8226'}, 'Leaf_T2-PiZt-11-S': {'expression_value': '38.8981'}, 'Leaf_T4-PiZt-11-R': {'expression_value': '52.2801'}, 'Leaf_T4-PiZt-11-S': {'expression_value': '46.0309'}, 'Leaf_T6-Pi9-R': {'expression_value': '40.19'}, 'Leaf_T6-PiZt-11-R': {'expression_value': '46.7486'}, 'Leaf_T6-Spin1i-1-R': {'expression_value': '44.5843'}, 'Leaf_WT': {'expression_value': '23.9789'}, 'Leaf_WT-DEX_24h_r1': {'expression_value': '87.6755'}, 'Leaf_WT-DEX_24h_r2': {'expression_value': '72.3144'}, 'Leaf_WT-DEX_3h_r1': {'expression_value': '79.1961'}, 'Leaf_WT-DEX_3h_r2': {'expression_value': '77.3955'}, 'Leaf_WT-DEX_6h_r1': {'expression_value': '73.2519'}, 'Leaf_WT-DEX_6h_r2': {'expression_value': '80.4431'}, 'Leaf_WT-DEX_r1': {'expression_value': '87.8951'}, 'Leaf_WT-DEX_r2': {'expression_value': '83.6312'}, 'Leaf_WT-DR_SRP052306_r1': {'expression_value': '62.8143'}, 'Leaf_WT-DR_SRP052306_r2': {'expression_value': '70.6892'}, 'Leaf_WT-DR_SRP052309_r1': {'expression_value': '62.8143'}, 'Leaf_WT-DR_SRP052309_r2': {'expression_value': '70.6892'}, 'Leaf_WT-DR_SRP052310_r1': {'expression_value': '62.8143'}, 'Leaf_WT-DR_SRP052310_r2': {'expression_value': '70.6892'}, 'Leaf_WT-WW_SRP052306_r1': {'expression_value': '34.3573'}, 'Leaf_WT-WW_SRP052306_r2': {'expression_value': '37.7566'}, 'Leaf_WT-WW_SRP052309_r1': {'expression_value': '34.3573'}, 'Leaf_WT-WW_SRP052309_r2': {'expression_value': '37.7566'}, 'Leaf_WT-WW_SRP052310_r1': {'expression_value': '34.3573'}, 'Leaf_WT-WW_SRP052310_r2': {'expression_value': '37.7566'}, 'Leaf_WT2007': {'expression_value': '55.158'}, 'Leaf_WT2011': {'expression_value': '50.9772'}, 'Leaf_r1': {'expression_value': '30.8635'}, 'Leaf_r2': {'expression_value': '25.6366'}, 'Leaf_r3': {'expression_value': '28.4384'}, 'Panicle': {'expression_value': '78.2446'}, 'Panicle_Normal': {'expression_value': '73.3214'}, 'Panicle_young_0.5cm': {'expression_value': '96.3697'}, 'Pistil_Normal': {'expression_value': '9.64749'}, 'Root': {'expression_value': '72.3508'}, 'Root_-Pi_0day_r1': {'expression_value': '66.6056'}, 'Root_-Pi_0day_r2': {'expression_value': '81.4081'}, 'Root_-Pi_22day_r1': {'expression_value': '80.1446'}, 'Root_-Pi_22day_r2': {'expression_value': '97.936'}, 'Root_1h+Pi_r1': {'expression_value': '85.8242'}, 'Root_1h+Pi_r2': {'expression_value': '73.4643'}, 'Root_1h+Pi_r3': {'expression_value': '77.9082'}, 'Root_1h-Pi_r1': {'expression_value': '95.3406'}, 'Root_1h-Pi_r2': {'expression_value': '92.4706'}, 'Root_1h-Pi_r3': {'expression_value': '72.0427'}, 'Root_21d+1h+Pi_r1': {'expression_value': '64.9653'}, 'Root_21d+1h+Pi_r2': {'expression_value': '63.2926'}, 'Root_21d+1h+Pi_r3': {'expression_value': '65.3596'}, 'Root_21d+1h-Pi_r1': {'expression_value': '67.3035'}, 'Root_21d+1h-Pi_r2': {'expression_value': '60.2096'}, 'Root_21d+1h-Pi_r3': {'expression_value': '59.1188'}, 'Root_21d+1hRe_r1': {'expression_value': '52.0808'}, 'Root_21d+1hRe_r2': {'expression_value': '54.8255'}, 'Root_21d+1hRe_r3': {'expression_value': '51.5446'}, 'Root_21d+24h+Pi_r1': {'expression_value': '58.6709'}, 'Root_21d+24h+Pi_r2': {'expression_value': '57.1194'}, 'Root_21d+24h+Pi_r3': {'expression_value': '67.4789'}, 'Root_21d+24h-Pi_r1': {'expression_value': '60.732'}, 'Root_21d+24h-Pi_r2': {'expression_value': '55.8718'}, 'Root_21d+24h-Pi_r3': {'expression_value': '59.9994'}, 'Root_21d+24hRe_r1': {'expression_value': '72.2052'}, 'Root_21d+24hRe_r2': {'expression_value': '61.6717'}, 'Root_21d+24hRe_r3': {'expression_value': '58.1112'}, 'Root_21d+6h+Pi_r1': {'expression_value': '54.5162'}, 'Root_21d+6h+Pi_r2': {'expression_value': '62.1754'}, 'Root_21d+6h+Pi_r3': {'expression_value': '63.0911'}, 'Root_21d+6h-Pi_r1': {'expression_value': '48.835'}, 'Root_21d+6h-Pi_r2': {'expression_value': '56.6811'}, 'Root_21d+6h-Pi_r3': {'expression_value': '66.3988'}, 'Root_21d+6hRe_r1': {'expression_value': '54.2305'}, 'Root_21d+6hRe_r2': {'expression_value': '57.4391'}, 'Root_21d+6hRe_r3': {'expression_value': '60.1172'}, 'Root_21d-Pi&3d+Pi_r1': {'expression_value': '49.7793'}, 'Root_21d-Pi&3d+Pi_r2': {'expression_value': '47.9091'}, 'Root_21d3d+Pi_r1': {'expression_value': '47.6652'}, 'Root_21d3d+Pi_r2': {'expression_value': '46.9909'}, 'Root_21d3d+Pi_r3': {'expression_value': '47.7517'}, 'Root_21d3d-Pi_r1': {'expression_value': '39.3592'}, 'Root_21d3d-Pi_r2': {'expression_value': '48.6712'}, 'Root_21dd+Pi_r1': {'expression_value': '57.2276'}, 'Root_21dd+Pi_r2': {'expression_value': '52.2949'}, 'Root_21dd+Pi_r3': {'expression_value': '55.6558'}, 'Root_21dd-Pi_r1': {'expression_value': '52.2873'}, 'Root_21dd-Pi_r2': {'expression_value': '56.7077'}, 'Root_21dd-Pi_r3': {'expression_value': '50.9264'}, 'Root_24h+Pi_r1': {'expression_value': '81.6171'}, 'Root_24h+Pi_r2': {'expression_value': '84.3447'}, 'Root_24h+Pi_r3': {'expression_value': '79.8298'}, 'Root_24h-Pi_r1': {'expression_value': '67.5298'}, 'Root_24h-Pi_r2': {'expression_value': '103.097'}, 'Root_24h-Pi_r3': {'expression_value': '67.2101'}, 'Root_3d+Pi_r2': {'expression_value': '88.7754'}, 'Root_3d+Pi_r3': {'expression_value': '93.6723'}, 'Root_3d-Pi_r1': {'expression_value': '94.1872'}, 'Root_3d-Pi_r2': {'expression_value': '91.1472'}, 'Root_3d-Pi_r3': {'expression_value': '83.0461'}, 'Root_52d-Pi': {'expression_value': '32.6736'}, 'Root_6h+Pi_r1': {'expression_value': '77.7537'}, 'Root_6h+Pi_r2': {'expression_value': '60.1435'}, 'Root_6h+Pi_r3': {'expression_value': '61.1722'}, 'Root_6h-Pi_r1': {'expression_value': '75.5707'}, 'Root_6h-Pi_r2': {'expression_value': '71.4591'}, 'Root_6h-Pi_r3': {'expression_value': '67.6992'}, 'Root_7d+Pi_r1': {'expression_value': '76.3556'}, 'Root_7d+Pi_r2': {'expression_value': '75.4801'}, 'Root_7d+Pi_r3': {'expression_value': '92.45'}, 'Root_7d-Pi_r1': {'expression_value': '68.5478'}, 'Root_7d-Pi_r2': {'expression_value': '74.4955'}, 'Root_7d-Pi_r3': {'expression_value': '69.6938'}, 'Root_Cd_0h_r1': {'expression_value': '60.6054'}, 'Root_Cd_0h_r2': {'expression_value': '95.4134'}, 'Root_Cd_0h_r3': {'expression_value': '96.4568'}, 'Root_Cd_1h_r1': {'expression_value': '50.3524'}, 'Root_Cd_1h_r2': {'expression_value': '48.8178'}, 'Root_Cd_1h_r3': {'expression_value': '49.5097'}, 'Root_Cd_24h_r1': {'expression_value': '30.7169'}, 'Root_DCL3a_+Pi': {'expression_value': '63.5553'}, 'Root_DCL3a_-Pi': {'expression_value': '51.7278'}, 'Root_Normal': {'expression_value': '75.1238'}, 'Root_WT_+Pi': {'expression_value': '75.2476'}, 'Root_WT_-Pi': {'expression_value': '62.4398'}, 'Seed_Normal': {'expression_value': '86.6164'}, 'Seed_OsCMT3a_WT_r1': {'expression_value': '54.713'}, 'Seed_OsCMT3a_WT_r2': {'expression_value': '55.0318'}, 'Seed_OsCMT3a_WT_r3': {'expression_value': '48.1936'}, 'Seed_aleurone_ABA&GA_4h': {'expression_value': '102.786'}, 'Seed_aleurone_ABA_4h': {'expression_value': '63.022'}, 'Seed_aleurone_GA_4h': {'expression_value': '145.077'}, 'Seed_aleurone_Mock_4h': {'expression_value': '97.9355'}, 'Seed_oscmt3a_mutant _r1': {'expression_value': '46.0367'}, 'Seed_oscmt3a_mutant _r2': {'expression_value': '47.7934'}, 'Seed_oscmt3a_mutant _r3': {'expression_value': '48.6041'}, 'Shoot_1h+Pi_r1': {'expression_value': '16.9911'}, 'Shoot_1h+Pi_r2': {'expression_value': '15.4598'}, 'Shoot_1h+Pi_r3': {'expression_value': '18.0655'}, 'Shoot_1h-Pi_r1': {'expression_value': '18.2559'}, 'Shoot_1h-Pi_r2': {'expression_value': '16.1044'}, 'Shoot_1h-Pi_r3': {'expression_value': '15.7909'}, 'Shoot_21d+1h+Pi_r1': {'expression_value': '20.7044'}, 'Shoot_21d+1h+Pi_r2': {'expression_value': '17.6553'}, 'Shoot_21d+1h+Pi_r3': {'expression_value': '21.176'}, 'Shoot_21d+1h-Pi_r1': {'expression_value': '22.0579'}, 'Shoot_21d+1h-Pi_r2': {'expression_value': '22.2673'}, 'Shoot_21d+1h-Pi_r3': {'expression_value': '18.4441'}, 'Shoot_21d+1hRe_r1': {'expression_value': '23.3436'}, 'Shoot_21d+1hRe_r2': {'expression_value': '19.1214'}, 'Shoot_21d+1hRe_r3': {'expression_value': '22.0932'}, 'Shoot_21d+24h+Pi_r1': {'expression_value': '19.55'}, 'Shoot_21d+24h+Pi_r2': {'expression_value': '18.4186'}, 'Shoot_21d+24h+Pi_r3': {'expression_value': '20.0485'}, 'Shoot_21d+24h-Pi_r1': {'expression_value': '23.7528'}, 'Shoot_21d+24h-Pi_r2': {'expression_value': '21.2964'}, 'Shoot_21d+24h-Pi_r3': {'expression_value': '17.025'}, 'Shoot_21d+24hRe_r1': {'expression_value': '41.2935'}, 'Shoot_21d+24hRe_r2': {'expression_value': '36.4319'}, 'Shoot_21d+24hRe_r3': {'expression_value': '37.097'}, 'Shoot_21d+6h+Pi_r1': {'expression_value': '21.3904'}, 'Shoot_21d+6h+Pi_r2': {'expression_value': '17.0968'}, 'Shoot_21d+6h+Pi_r3': {'expression_value': '19.6843'}, 'Shoot_21d+6h-Pi_r1': {'expression_value': '27.1152'}, 'Shoot_21d+6h-Pi_r2': {'expression_value': '22.9759'}, 'Shoot_21d+6h-Pi_r3': {'expression_value': '23.8074'}, 'Shoot_21d+6hRe_r1': {'expression_value': '22.9763'}, 'Shoot_21d+6hRe_r2': {'expression_value': '23.2225'}, 'Shoot_21d+6hRe_r3': {'expression_value': '23.9587'}, 'Shoot_21dd+Pi_r1': {'expression_value': '20.5876'}, 'Shoot_21dd+Pi_r2': {'expression_value': '17.7039'}, 'Shoot_21dd+Pi_r3': {'expression_value': '18.3835'}, 'Shoot_21dd-Pi_r1': {'expression_value': '24.3511'}, 'Shoot_21dd-Pi_r2': {'expression_value': '23.736'}, 'Shoot_21dd-Pi_r3': {'expression_value': '22.0544'}, 'Shoot_24h+Pi_r1': {'expression_value': '18.7703'}, 'Shoot_24h+Pi_r2': {'expression_value': '20.8687'}, 'Shoot_24h+Pi_r3': {'expression_value': '18.1681'}, 'Shoot_24h-Pi_r1': {'expression_value': '15.7648'}, 'Shoot_24h-Pi_r2': {'expression_value': '18.1809'}, 'Shoot_24h-Pi_r3': {'expression_value': '13.7862'}, 'Shoot_3d+Pi_r1': {'expression_value': '12.2574'}, 'Shoot_3d+Pi_r2': {'expression_value': '17.9636'}, 'Shoot_3d+Pi_r3': {'expression_value': '16.4374'}, 'Shoot_3d-Pi_r1': {'expression_value': '13.5688'}, 'Shoot_3d-Pi_r2': {'expression_value': '17.9119'}, 'Shoot_3d-Pi_r3': {'expression_value': '16.8631'}, 'Shoot_6h+Pi_r1': {'expression_value': '17.6347'}, 'Shoot_6h+Pi_r2': {'expression_value': '18.5155'}, 'Shoot_6h+Pi_r3': {'expression_value': '12.8945'}, 'Shoot_6h-Pi_r1': {'expression_value': '17.4161'}, 'Shoot_6h-Pi_r2': {'expression_value': '14.5277'}, 'Shoot_6h-Pi_r3': {'expression_value': '14.035'}, 'Shoot_7d+Pi_r1': {'expression_value': '16.7471'}, 'Shoot_7d+Pi_r2': {'expression_value': '19.4757'}, 'Shoot_7d+Pi_r3': {'expression_value': '13.8163'}, 'Shoot_7d-Pi_r1': {'expression_value': '16.4728'}, 'Shoot_7d-Pi_r2': {'expression_value': '18.3341'}, 'Shoot_7d-Pi_r3': {'expression_value': '20.0309'}, 'Shoot_As(III)_24h': {'expression_value': '21.0668'}, 'Shoot_Cd_0h_r1': {'expression_value': '40.8512'}, 'Shoot_Cd_0h_r2': {'expression_value': '43.7506'}, 'Shoot_Cd_0h_r3': {'expression_value': '40.9173'}, 'Shoot_Cd_1h_r1': {'expression_value': '40.1588'}, 'Shoot_Cd_1h_r2': {'expression_value': '41.0294'}, 'Shoot_Cd_1h_r3': {'expression_value': '46.3108'}, 'Shoot_Cd_24h_r1': {'expression_value': '45.9701'}, 'Shoot_Cd_24h_r2': {'expression_value': '51.0984'}, 'Shoot_Cd_24h_r3': {'expression_value': '47.9063'}, 'Shoot_MET1-2_Mm': {'expression_value': '37.9899'}, 'Shoot_MET1-2_WT': {'expression_value': '39.9503'}, 'Shoot_MET1-2_mm': {'expression_value': '72.568'}, 'Shoot_Normal': {'expression_value': '2.92978'}, 'Shoot_WT': {'expression_value': '63.2788'}}, 'embl_ebi': {'9 Davidson - anther': '64', '9 Davidson - callus': 'NA', '9 Davidson - carpel': 'NA', '9 Davidson - early inflorescence': '152', '9 Davidson - emerging inflorescence': '127', '9 Davidson - endosperm': '40', '9 Davidson - leaf': '40', '9 Davidson - microgametophyte vegetative cell': 'NA', '9 Davidson - pistil': '138', '9 Davidson - plant egg cell': 'NA', '9 Davidson - plant embryo': '88', '9 Davidson - pollen sperm cell': 'NA', '9 Davidson - post-flowering panicle': 'NA', '9 Davidson - pre-flowering panicle': 'NA', '9 Davidson - root': 'NA', '9 Davidson - seed': 'NA', '9 Davidson - seed 10 days after pollination': '103', '9 Davidson - seed 5 days after pollination': '326', '9 Davidson - shoot': 'NA', '7 Sakai - anther': 'NA', '7 Sakai - callus': '73', '7 Sakai - carpel': 'NA', '7 Sakai - early inflorescence': 'NA', '7 Sakai - emerging inflorescence': 'NA', '7 Sakai - endosperm': 'NA', '7 Sakai - leaf': '53', '7 Sakai - microgametophyte vegetative cell': 'NA', '7 Sakai - pistil': 'NA', '7 Sakai - plant egg cell': 'NA', '7 Sakai - plant embryo': 'NA', '7 Sakai - pollen sperm cell': 'NA', '7 Sakai - post-flowering panicle': '168', '7 Sakai - pre-flowering panicle': '138', '7 Sakai - root': '185', '7 Sakai - seed': '223', '7 Sakai - seed 10 days after pollination': 'NA', '7 Sakai - seed 5 days after pollination': 'NA', '7 Sakai - shoot': '87', '4 Zhang et al - anther': '58', '4 Zhang et al - callus': 'NA', '4 Zhang et al - carpel': '65', '4 Zhang et al - early inflorescence': 'NA', '4 Zhang et al - emerging inflorescence': 'NA', '4 Zhang et al - endosperm': 'NA', '4 Zhang et al - leaf': 'NA', '4 Zhang et al - microgametophyte vegetative cell': 'NA', '4 Zhang et al - pistil': 'NA', '4 Zhang et al - plant egg cell': 'NA', '4 Zhang et al - plant embryo': 'NA', '4 Zhang et al - pollen sperm cell': 'NA', '4 Zhang et al - post-flowering panicle': 'NA', '4 Zhang et al - pre-flowering panicle': 'NA', '4 Zhang et al - root': 'NA', '4 Zhang et al - seed': '269', '4 Zhang et al - seed 10 days after pollination': 'NA', '4 Zhang et al - seed 5 days after pollination': 'NA', '4 Zhang et al - shoot': '29', 'Anderson et al - anther': 'NA', 'Anderson et al - callus': 'NA', 'Anderson et al - carpel': 'NA', 'Anderson et al - early inflorescence': 'NA', 'Anderson et al - emerging inflorescence': 'NA', 'Anderson et al - endosperm': 'NA', 'Anderson et al - leaf': 'NA', 'Anderson et al - microgametophyte vegetative cell': '7', 'Anderson et al - pistil': 'NA', 'Anderson et al - plant egg cell': '194', 'Anderson et al - plant embryo': 'NA', 'Anderson et al - pollen sperm cell': '23', 'Anderson et al - post-flowering panicle': 'NA', 'Anderson et al - pre-flowering panicle': 'NA', 'Anderson et al - root': 'NA', 'Anderson et al - seed': 'NA', 'Anderson et al - seed 10 days after pollination': 'NA', 'Anderson et al - seed 5 days after pollination': 'NA', 'Anderson et al - shoot': 'NA'}, 'gwas_atlas': {'VarID': ['osa5912'], 'Traits': ['total biomass yield'], 'Species': ['Rice'], 'Position': ['chr1:143282'], 'P-values': [2.4e-05], 'R2(%)': [\"'-\"], 'Mapped Gene(s)': ['Os01g0102700 Os01g0102600 Os01g0102500 Os01g0102400 '], 'Consequence Type(s)': ['upstream_gene_variant upstream_gene_variant missense_variant downstream_gene_variant '], 'PMID': [29767744]}}, 'OsNippo01g011350': {'msu': {'Genomic Sequence': ' >LOC_Os01g01210 ATGCACTGTAGTAAAGGTGGGTTGGTTGGGCCTGTTCAACGTGGTGTAGCGTTGATCAGT GGAGATTTAATATTACTTTAATTACTCAACAGTTTTACTGTTTTGCTCAATAAAATGTTT TACAACTGCCTTTATGCAAATAGCCACAAACCGTCCTTGTGTTCCCCCTTGCACGTCTGC ATCGTTGGTGTGGCTTGCTGAGTACGGTGGTTGTACTCAGCCTTGCTATTATTCCCCCTT TTCAGAAGTGTAGTGCTTCTGAGCTGAAGATGGAGTTAGAGGACCAAGGCTCAGACCCCA GTTGAGTTTTGCCTGTGGAGTGGAGCTGAAGCCCCGCTAGGATCGCCTTTTTCCGCTGCT GCTGCTTTTGTTTCGGTGTGAGGACTAAGTGCCTCTTCTGTAAGTATTTTACGCTTTATT TACGTTTGGAACTGTTTATTACTTGTCGTTTTGTGTACCCTGGCTGGTCCTGGACAGGGA TTTAATACACAAAATAGTCTGGAAATTTGGGCTAAATTTCTGGGCGTGACAGTTCTTCTG GCCAACCGCCCTCAAAGATGCTTGCGACATGGTTTAGCGGTGTGAAGCTGTCAATTCCAC AGTAAACACACAAGGCTACCAGCGCAAGCACTCCAGACCATCCCTCTCACTTGGCCGTTC TCGTACTGGGGGCTAGATATACTCGGCCCATTCCCACGAGGACAGGGCGGCTACAAGTTC CTATTCGTGGCGATTGATAAATTCACTAAGTGGATTGAAGCGACACCCACGGGGGAAATC AAGGCCGACAACGCCATCAAATTCATCAAAGGGATATTCTGTAGATTTGGATTGCCCCAC CGTATCATAACGGACAACGGCTCCCAGTTCATCAGTGTCGATTTCCAGGACTACTGCATC AGGCTGGGAGTCAAGATCTGCTTCGCTCGGTTTCTCACCCTCAGAGCAATGGACAAGTCG AGAGGGCAAACGGCATAGTACTACAAGGAATCAAGACCCGCGTCTACGACAGGCTCATGT CACATGACAAGAAGTGGGTCGAAGAACTTCCATCAGTACTATGGGCCGTGCGTACCACAC CGACAACGTCTAACAAGGAGACACCCTTCTTCCTCGTGTACGGCTCAGAGGCTATGCTCC CCACCAAGCTACGATACCAAAGTACACGAGCACATAAGTACTCCGATGAGAATCAGGAGG AGCAGCGAAATGACGATGTGAATCTACTCGAAGAACATCGCGAACGAGTTGTCGTTCGAG CAGCCAGCTACCAACAGGCCCTTCACCGCTACTACGAGAAACGCATCCGAGCACGCACAC TTTCGATCGGCGACTACGTCCTCCGACGGGTTCAAAGTCAAGCAGGGCGAAACAAGCTCT CACCCAAATGGGAAGGACCGTACACGATCACACAAGTTCTGCAGCCAGGCGCATTCAAAA TTGCAGACGGCGATGGTCGCGAGTTGGCAAATTCCTGGAACATTAATCAATTACGTAAAT TCTATGTATAA ', 'CDS': ' >LOC_Os01g01210.1 ATGCACTGTAGTAAAGGACTACTGCATCAGGCTGGGAGTCAAGATCTGCTTCGCTCGGTT TCTCACCCTCAGAGCAATGGACAAGTCGAGAGGGCAAACGGCATAGTACTACAAGGAATC AAGACCCGCGTCTACGACAGGCTCATGTCACATGACAAGAAGTGGGTCGAAGAACTTCCA TCAGTACTATGGGCCGTGCGTACCACACCGACAACGTCTAACAAGGAGACACCCTTCTTC CTCGTGTACGGCTCAGAGGCTATGCTCCCCACCAAGCTACGATACCAAAGTACACGAGCA CATAAGTACTCCGATGAGAATCAGGAGGAGCAGCGAAATGACGATGTGAATCTACTCGAA GAACATCGCGAACGAGTTGTCGTTCGAGCAGCCAGCTACCAACAGGCCCTTCACCGCTAC TACGAGAAACGCATCCGAGCACGCACACTTTCGATCGGCGACTACGTCCTCCGACGGGTT CAAAGTCAAGCAGGGCGAAACAAGCTCTCACCCAAATGGGAAGGACCGTACACGATCACA CAAGTTCTGCAGCCAGGCGCATTCAAAATTGCAGACGGCGATGGTCGCGAGTTGGCAAAT TCCTGGAACATTAATCAATTACGTAAATTCTATGTATAA ', 'Protein': ' >LOC_Os01g01210.1 MHCSKGLLHQAGSQDLLRSVSHPQSNGQVERANGIVLQGIKTRVYDRLMSHDKKWVEELP SVLWAVRTTPTTSNKETPFFLVYGSEAMLPTKLRYQSTRAHKYSDENQEEQRNDDVNLLE EHRERVVVRAASYQQALHRYYEKRIRARTLSIGDYVLRRVQSQAGRNKLSPKWEGPYTIT QVLQPGAFKIADGDGRELANSWNINQLRKFYV* '}}, 'OsNippo01g011450': {'msu': {'Genomic Sequence': ' >LOC_Os01g01230 ATGGCACGGGGCTCTGCTCTGCTCGACGGCAGCGTGCTACCGCCTTCCCGCATTGTGAAT GAGAGGCACGCCGGACTGCCGCGCCGCTTCATGCCGGAGTCCGCCACCGGTCGGGAGATA GTGATGCTGGGCAAGGGGCGCCCGGCACCAGACTACCCGGGGCGGTCCATCTTCTTCCTC CCCTTCGCGATGGCTGGGCTGGTCCCGCCATTTTCTCATTTCTTCATGGATGTCCTGGAG TTCTACGATCTCCAGATGGCGCACCTCACCCCCAATGCGGTGATGACATTGGCCATCTTC GCGCACCTGTGCGAGATGTTCATTGGGGTGCGCCCCTCTCTTCAGCTGTTCCGGTGGTTC TTCACCGTGCAGTCGGTGTCACCGCCGTCGGTGGTTGGCGGCTGCTACTTCCAGCCGCGG GGGCCGGTGCTGAACCGCTACATCCCCTGCGTCCTCCGCAAGAAGTGGGACGACTGGAAG AGCGACTGGTTCTACACCTCCCTCGCCAACGAAGCGCGCCTCCGACTTCCAAGCCAGCCC CCGGCGCAGGTCTCCAGCTGGCGGGCGCCGGTAGATCTGGGGGAGGAGTACGACGCCGTC CTCGACCGCCTGGTGGGCCTGCGATCCCAGGGGCTCACCGGGGCCATGGTTGTCACGCCC TGA ', 'CDS': ' >LOC_Os01g01230.1 ATGGCACGGGGCTCTGCTCTGCTCGACGGCAGCGTGCTACCGCCTTCCCGCATTGTGAAT GAGAGGCACGCCGGACTGCCGCGCCGCTTCATGCCGGAGTCCGCCACCGGTCGGGAGATA GTGATGCTGGGCAAGGGGCGCCCGGCACCAGACTACCCGGGGCGGTCCATCTTCTTCCTC CCCTTCGCGATGGCTGGGCTGGTCCCGCCATTTTCTCATTTCTTCATGGATGTCCTGGAG TTCTACGATCTCCAGATGGCGCACCTCACCCCCAATGCGGTGATGACATTGGCCATCTTC GCGCACCTGTGCGAGATGTTCATTGGGGTGCGCCCCTCTCTTCAGCTGTTCCGGTGGTTC TTCACCGTGCAGTCGGTGTCACCGCCGTCGGTGGTTGGCGGCTGCTACTTCCAGCCGCGG GGGCCGGTGCTGAACCGCTACATCCCCTGCGTCCTCCGCAAGAAGTGGGACGACTGGAAG AGCGACTGGTTCTACACCTCCCTCGCCAACGAAGCGCGCCTCCGACTTCCAAGCCAGCCC CCGGCGCAGGTCTCCAGCTGGCGGGCGCCGGTAGATCTGGGGGAGGAGTACGACGCCGTC CTCGACCGCCTGGTGGGCCTGCGATCCCAGGGGCTCACCGGGGCCATGGTTGTCACGCCC TGA ', 'Protein': ' >LOC_Os01g01230.1 MARGSALLDGSVLPPSRIVNERHAGLPRRFMPESATGREIVMLGKGRPAPDYPGRSIFFL PFAMAGLVPPFSHFFMDVLEFYDLQMAHLTPNAVMTLAIFAHLCEMFIGVRPSLQLFRWF FTVQSVSPPSVVGGCYFQPRGPVLNRYIPCVLRKKWDDWKSDWFYTSLANEARLRLPSQP PAQVSSWRAPVDLGEEYDAVLDRLVGLRSQGLTGAMVVTP* '}}, 'OsNippo01g011500': {'msu': {'Genomic Sequence': ' >LOC_Os01g01240 ATGGCAGTTAAGGACCGGTTCACGGGAAACCCTGGGAGACTTACCGTGCTTTCCACAAGC GGGAGTGGGTAACTGCTTGATCTGAAGTATAGCTCGACCCTTTCCTAGGCACCGGTGGCG AGGGTGGGCGTGATGGAGTTGGGTCGGCCGGGGTGTCCGGTTGTCCAGCTGCCGGATTCA CCGCGGCGCAAGAGGGGACCGCCCACTGCCTTTTGAGGGGTGGGGGTGAAACCTTAGCGT GGTGTGGATGATTAGGGGAGGGTTATGTGGAGGGTCTTGTCACGATTTCCCCCTTTGCAG TATCATGGTGATACTTCGGGGCATGGCGACATGTGTGGAATCGTGTCTTGTGGGTACAGT TGTACACCTCTGGCCAGAGTAAAACTATTCGAATAGCCGTGCCCGCGGTTATGGGCGATC AACCAGATTCACCGTGATTAGTCTCATTCCTAGTTTAGCTTAATGAACTGGTGTAGTTCA GGTGGTTGGTTGGGCCTGTTGCAACGTGGGGTAGCGTTGGACAGTGTTTGGTTAATATTG ATTAATTACTACAACTGTTTTACTGCCTTCAACTACTGTTTTTAAATGCTAGCTTTATGC AAAAGAACCTCTAGCCTCCTTTGGTTATATCCTGCATCATACCTCCTCTTCCGGTATGAC TTGCTGAGTACAGTGGGTAGTACTCAGTCTTGCTCTCTTTTCCCCCACACCAGAGCTGAA GATCTTCCTAGTTGGAGCTGTTTTGTCAAAGTTGGTTTCGTCGCTGCCGTCAAGGATTGC CTGTGGAGTGGAGTCGCCCGCTGCTGAAGTCAAGCTTCCCGGTTTAGCTCGCTTTTATCT TTTCCGCTGCATTTGTAATATTTTCTATTTTTGTAAGACGTGGATCTGTATGTCAACAAT TGTCGTTTGTGTACCCTGGCTGGTCCTGGACAGGGATTTAATGCACATTCAGCTTAGAAA TTCTGGTTCGAGAATTTCTGGGCGTGACAAGTTGGTATCAGAGCCGACCTTGACCGTAGG ACAAGCCAACTGGAAACCCTAAGAGCCCTCTGAACCCCTTTTTCATCTGCATATGCCTTT TTGCACCTGGAATTGTTTTGGGAAAATTTGGAGTTTTGCCTCTTTGGTTTGCGGGAAAAA TCTTGGTCGTTCATTCGGATCGGATTTTTTTTTTTTAAAAAAAAAATGAGCTCAGCCTAG GGCTTTAGAAAAATTTTAGTTGGAGTTTATTCGATAGTCAGTCGGGAATTTATTGGGGGT TATGCATTAGGTCGTGTCTATATTCGATGGGGGCAATGTTATGCGCATCATTTTCCATGC AACTAGTCTATGCATTAATTTATTGTTTAGTTGCATTAGTGTCTTTATTTGAGTTCATGA AAAATGTTCTATGCATAAAAATCATCCTGCTCGGTTATTGATTTGAGTCTTCTTTTGCTT TGTTTAATTTGGATTTGAGCATGAATTGGTTCCTATCCCTTGTCTACTTTAGATGTCAGT CCTATCCCTCGTTTGCAAGCGCCGCCTCGAGCTTCAGAGTCACCGCCCTTAGCTTTATCG CCTTCTTAGTCTGTTTGCTTGCTAGTTTTCGTGTTTAGGTTTGATGCTTGTGGGCTAGTC GGCGGTCGATATCATGTGTCAGTGGTATGACTGCCTCAATTAGGAGTTGCGTGCCTCTTT TTCAGTGTTTTAATCAAGATTAAGATAATTGCACTTAAATTCATAAGAAAGATTAGTTTC TGAGCCCCCTGTTTTTCTTCCTTTTCTCATATTTCTACCTATCCCCTTCAGATGGAGACA AGGAATGGTTCACGCGACTCGAACAACGCTAGTGGCAGCGAAAAGCCGATCAATGGAGCA CGTGCCAACAGTGCATCTGACAACAGTCCGTCCCCACCGCCCGAGAACCCAACAATTGCT CAGGTGTTGGACAATCAGACTCAGATGATGACAATGATGATGCAACAGATGCAGCAACAG TACCATCAGGTGTTGCAACAGGTGCAGCAGCAAGCACAGCTGCAGCAGCAGAACCTGCAG TTTGGTTCTCCACCTCCTCAGTCCAAACTGCTAGAATTTCTTCGTGTCAAGCCGCCCACC TTCTCAAGCACCACCAACCCAATCGAGGCCCACGACTGGCTTCATGCCATTGAGAAGAAG CTGAATCTTTTGCAATGCAACGAGCAAGAGAAGGTTGCTTTTGCTACACACCAGCTGCAA GGTCCCGCTTCTATTTGGTGGGACAACTACATGGTGACCCGTCCAGCTGGGGCAGAGGTT ACTTGGACAGAGTTTCGTCATAGTTTCAATAAAGCACAGGTTCCCGAGGGAATTGTGGCA CAAAAGAAGAGAGAGTTCCGTTCCCTACAACAAGGAACCAGAACAGTTATAGAGTATTTG CATGAGTTCAACCTCCTCGCGCGCTACGCCCCTGAGGACGTGCGTACCGATGCCGAGAGG CAGGAGAAGTTTTTGTCTGGTCTTGATGATGAATTGACTAACCAGTTGATCTCTAGAGAT TATGAGGACTTTGAGAAGCTGGTGGATAAGGCTATCCGTCAGGAGGAGCACTGTAACAAA ATAAACCGTAAGAGGAAGGCAGCTCAGTTCAGGACTCCCCAGGGGAAGAGTCAGAAGCCT CGTTTCACGATGGGACGTCACGGTGGACCTTCCACCATGATTATCCGACAGCACCGTCCC TACCACCCGGGTAGCTTCAACAAGAACCACCATAATGGCAGTCACAACAACAGTGAGCAG CACAGTCTCAACCCTACTCCGAGTTCACTAAAGATTCCAGCTCAATCAGTTCAGCCAGCT CTGCCAGAACAGCCCAAGAGGTTGGGAGAAAAACCCGAACTCTGCTTCAATTGTAACAAA CCCGGACACACGGTTGGAAAGTGCCCGAAGCCAAGACGTGCTGGACCCAAGTTCGTTCAG GCCCGTGTTAATCATGCATCTGCAGAGGAGGCGCAGTCAGCACCAGAGGTTATATTGGGC ACATTCCCCGTCAACTCGACACCGGCAGTAATATTGTTTGATTCTGGTGCAACCCATTCC TTCATTTCCAAGCGTTTTGCTGGTGCACATGGGTTATCCTTAGTGAAGCTTAAGATACCA ATGCGAGTGCATACTCCTGGAGGTGGCATGACCACAACTCACTACTGCCCATCTGTGACA GTTGAAATTCAAGGGTTGATTTTTCCAGCCAACCTCATTCTTCTCGAATCCAAGGACCTA GATGTCATACTTGGAATGGATTGGTTAACAAGGCACAGAGGAGTGATTGATTGCGCCAGC CGCACCATCAAGTTAACCAATGCAAAAGGAGAGGTGGTAACCTTCCAGTCTCTAGTGCCG CGGAAGCCAGGGATCAGTTTAAACCAGGCTGCTGGTGAAGAACAAGAGGTAGCAGTGGAG AAAACCACTAAGAAGCTGGAGGATATTCCCATAGTCAGAGAGTATCCAGAGGTTTTTCCG GACGATCTGACAACAATGCCACCAAAAAGGGATATCGAGTTCCGGATTGACTTGGTACCT GGAACTGCACCGATCCACAAGAGGCCTTACAGAATGGGAGCCAGCGAGTTGGCGGAAGTC AAGAAGCAAGTCGATGAGCAGTTACAGAAGGGATACATCCGCCCGAGCACGTCGCCTTGG GGTGCTCCGGTTATCTTTGTGGAGAAGAAAGACAAAACCAAGAGGATGTGCGTTGACTAC CGCGCACTCAATGAGGTCACCATCAAGAACAAGTATCCTTTGCCAAGGATTGATGACCTG TTTGATCAGTTGAAAGGAGCTACTGTGTTCTCTAAGATAGACCTGCGATCAGGCTATCAC CAGTTGAGGATCCGCGAAGAGGATATTCCAAAGACAGCATTCATCACTCGGTACGGGTTG TTCGAATGCACAGTTATGTCTTTCGGACTCACTAATGCACCTGCCTTCTTCATGAATTTG ATGAACAAGGTGTTTATGGAATTTCTAGACAAGTTTGTCGTGGTTTTCATCGATGACATA CTTATCTACTCCAAGTCCGAGGAAGAACATGAGCAGCATCTTCGGCTGGTACTTGAAAAG TTAAAAGAGCACCAGCTATATGCCAAGTTCAGCAAGTGCGACTTCTGGCTTAAGGAAGTT CAGTTTCTCGGTCACATCGTGAATGCTCAAGGAGTAGCTGTGGATCCAGCAAATGTGGAG TCAGTTACCAAATGGACCCCACCAAGGACAGTCACTCAGGTTCGGAGTTTCTTAGGACTT GCGGGCTATTACCGCCGGTTCATTGAGAACTTCTCTAAAATTGCTAAGCCAATGACACAG CTATTGAAGAAGGAAGAAAAGTTTATCTGGTCTGCTGAATGCAATAGGAGTTTTGAAGAA CTCAAACGACGGTTGGTGTCTGCACCAGTCTTAATCCTGCCTGATCAGACGAAAGATTTC CAGGTCTATTGTGATGCATCTCGCCAGGGGCTAGGATGTGTGTTGATGCAGGATGGCAAA GTGGTTTCTTATGCTTCACGGCAGTTGCGTCCTCATGAAGGCAACTACCCGACGCATGAT CTGGAATTAGCCGCAGTTGTTCATGCTTTAAAGATTTGGCGGCACTATCTCATCGGTAAC CGTTGTGAGGTATATACAGATCACAAAAGTCTAAAGTACATCTTCACCCAACCTGATCTG AATCTCCGACAGCGAAGATGGTTGGAGCTAATTAAAGATTATGATATGGGAATACATTAT CATCCCGGCAAGGCTAATGTGGTTGCGGATGCCTTGAGCAGGAAGAGCTACTGCAATGTT GCATGGGTAGAGCAACTATGTGGTGAGGTTCAACGCGATTTGGAACATCTGAACCTTGGT ATAGTTGAGCACGGATTCGTGGCTGCCCTAGAGGCACAGCCCACGCTGGTGGAGCAGGTT CGCATAGCTCAGGCAAGTGATCCTGAAATAGCAGAGCTCAAAAAGAACATGAGGGTTGGA AAAGCCCGAGGTTTTGTTGAGGATGAACAAGGAACAATCTGGATGGGAGAAAGATTGTGT GTACCCGAAAACAAGGAATTAAAAGACCTGATACTAACCGAGGCTCATCAAACTCAATAT TCCATTCATCCCGGTAGTACTAAGATGTACCAAGACCTCAAAGAAAAGTTCTGGTGGGTC AGCATGAGAAGGGAAATAGCTGAGTTCGTAGCACTCTGTGACGTCTGTCAACGAGTAAAG GCAGAACACCAAAGGCCAGCAGGTTTGCTACAGCCACTTCAGATTCCAGAATGGAAGTGG GAAGAAATCGGAATGGATTTCATCACCGGTTTGCCCAGGACGTCATCGGGGCATGATTCT ATTTGGGTAGTCGTTGACCGACTCACCAAAGTGGCTCACTTCATTCCGGTGCACACTACC TACTCAGGGAAGAAATTAGCAGAACTCTATCTATCAAGAATCATGTGTTTACATGGTGTA CCTAAGAAGATCGTGTCTGATCGAGGAAGCCAATTCACTTCAAAGTTCTGGCAGAAATTA CAAGAAGAATTGGGAACCCGGTTGAATTTCAGCACCGCTTACCATCCACAAACAGATGGC CAGACCGAGCGAGTCAATCAAATACTAGAGGATATGTTGAGAGCTTGTGCGCTTGACTTT GGTGGGGCATGGGACAAAAGCTTGCCGTATGCTGAGTTCTCGTACAACAACAGTTACCAA GCTAGTCTGCAGATGGCACCATTTGAAGCACTGTATGGACGGAGGTGTCGTACTCCGCTC TTCTGGGATCAGACAGGGGAACGCCAGTTGTTTGGTACAGAAGTTTTAAATGAGGCAGAA GAGAAAGTCAGAGCTGTTAGGGAAAGATTGAGAATCGCGCAATCTCGGCAGAAAAGCTAT GCAGACAACCGCCGAAGGGAGCTCGTTTTCCAAGTAGGGGATTATGTGTATCTCCGTGTC ACTCCGCTCAGGGGAGTACACCGCTTCCAAACCAAAGGAAAGTTGGCACCACGCTTTGTG GGACCATATCGGATTTTGGAACGCAGGGGTGAAGTTGCTTACCAGCTTGAGCTTCCCTCC AACATGCTTGGCATCCATAATGTGTTCCACGTCTCTCAGTTGAAGAAATGTTTGAGAGTT CCTGAGGAACAGGCAAGTCCGGATCAAATCGAAATCCAGGAAGACTTGACGTATGTGGAG AAGCCAACTCGTATCCTCGAAACCAGCGAGAGAAAGACCAGAAACAAAGTAATAAGATTC TGCAAGGTTCAGTGGAGCCACCACTCAGAGGAAGAGGCCACTTGGGAAAGAGAAGATGAG TTGAAGGCCACCCACCCGCACCTCTTCGCCAGCTCTTCCGAATCTCGGGGTCGAGATTCC GTTTAA ', 'CDS': ' >LOC_Os01g01240.1 ATGGCAGTTAAGGACCGGTTCACGGGAAACCCTGGGAGACTTACCGTGCTTTCCACAAGC GGGAGTGGGTTTGATGCTTGTGGGCTAGTCGGCGGTCGATATCATGTGTCAGTGATGGAG ACAAGGAATGGTTCACGCGACTCGAACAACGCTAGTGGCAGCGAAAAGCCGATCAATGGA GCACGTGCCAACAGTGCATCTGACAACAGTCCGTCCCCACCGCCCGAGAACCCAACAATT GCTCAGGTGTTGGACAATCAGACTCAGATGATGACAATGATGATGCAACAGATGCAGCAA CAGTACCATCAGGTGTTGCAACAGGTGCAGCAGCAAGCACAGCTGCAGCAGCAGAACCTG CAGTTTGGTTCTCCACCTCCTCAGTCCAAACTGCTAGAATTTCTTCGTGTCAAGCCGCCC ACCTTCTCAAGCACCACCAACCCAATCGAGGCCCACGACTGGCTTCATGCCATTGAGAAG AAGCTGAATCTTTTGCAATGCAACGAGCAAGAGAAGGTTGCTTTTGCTACACACCAGCTG CAAGGTCCCGCTTCTATTTGGTGGGACAACTACATGGTGACCCGTCCAGCTGGGGCAGAG GTTACTTGGACAGAGTTTCGTCATAGTTTCAATAAAGCACAGGTTCCCGAGGGAATTGTG GCACAAAAGAAGAGAGAGTTCCGTTCCCTACAACAAGGAACCAGAACAGTTATAGAGTAT TTGCATGAGTTCAACCTCCTCGCGCGCTACGCCCCTGAGGACGTGCGTACCGATGCCGAG AGGCAGGAGAAGTTTTTGTCTGGTCTTGATGATGAATTGACTAACCAGTTGATCTCTAGA GATTATGAGGACTTTGAGAAGCTGGTGGATAAGGCTATCCGTCAGGAGGAGCACTGTAAC AAAATAAACCGTAAGAGGAAGGCAGCTCAGTTCAGGACTCCCCAGGGGAAGAGTCAGAAG CCTCGTTTCACGATGGGACGTCACGGTGGACCTTCCACCATGATTATCCGACAGCACCGT CCCTACCACCCGGGTAGCTTCAACAAGAACCACCATAATGGCAGTCACAACAACAGTGAG CAGCACAGTCTCAACCCTACTCCGAGTTCACTAAAGATTCCAGCTCAATCAGTTCAGCCA GCTCTGCCAGAACAGCCCAAGAGGTTGGGAGAAAAACCCGAACTCTGCTTCAATTGTAAC AAACCCGGACACACGGTTGGAAAGTGCCCGAAGCCAAGACGTGCTGGACCCAAGTTCGTT CAGGCCCGTGTTAATCATGCATCTGCAGAGGAGGCGCAGTCAGCACCAGAGGTTATATTG GGCACATTCCCCGTCAACTCGACACCGGCAGTAATATTGTTTGATTCTGGTGCAACCCAT TCCTTCATTTCCAAGCGTTTTGCTGGTGCACATGGGTTATCCTTAGTGAAGCTTAAGATA CCAATGCGAGTGCATACTCCTGGAGGTGGCATGACCACAACTCACTACTGCCCATCTGTG ACAGTTGAAATTCAAGGGTTGATTTTTCCAGCCAACCTCATTCTTCTCGAATCCAAGGAC CTAGATGTCATACTTGGAATGGATTGGTTAACAAGGCACAGAGGAGTGATTGATTGCGCC AGCCGCACCATCAAGTTAACCAATGCAAAAGGAGAGGTGGTAACCTTCCAGTCTCTAGTG CCGCGGAAGCCAGGGATCAGTTTAAACCAGGCTGCTGGTGAAGAACAAGAGGTAGCAGTG GAGAAAACCACTAAGAAGCTGGAGGATATTCCCATAGTCAGAGAGTATCCAGAGGTTTTT CCGGACGATCTGACAACAATGCCACCAAAAAGGGATATCGAGTTCCGGATTGACTTGGTA CCTGGAACTGCACCGATCCACAAGAGGCCTTACAGAATGGGAGCCAGCGAGTTGGCGGAA GTCAAGAAGCAAGTCGATGAGCAGTTACAGAAGGGATACATCCGCCCGAGCACGTCGCCT TGGGGTGCTCCGGTTATCTTTGTGGAGAAGAAAGACAAAACCAAGAGGATGTGCGTTGAC TACCGCGCACTCAATGAGGTCACCATCAAGAACAAGTATCCTTTGCCAAGGATTGATGAC CTGTTTGATCAGTTGAAAGGAGCTACTGTGTTCTCTAAGATAGACCTGCGATCAGGCTAT CACCAGTTGAGGATCCGCGAAGAGGATATTCCAAAGACAGCATTCATCACTCGGTACGGG TTGTTCGAATGCACAGTTATGTCTTTCGGACTCACTAATGCACCTGCCTTCTTCATGAAT TTGATGAACAAGGTGTTTATGGAATTTCTAGACAAGTTTGTCGTGGTTTTCATCGATGAC ATACTTATCTACTCCAAGTCCGAGGAAGAACATGAGCAGCATCTTCGGCTGGTACTTGAA AAGTTAAAAGAGCACCAGCTATATGCCAAGTTCAGCAAGTGCGACTTCTGGCTTAAGGAA GTTCAGTTTCTCGGTCACATCGTGAATGCTCAAGGAGTAGCTGTGGATCCAGCAAATGTG GAGTCAGTTACCAAATGGACCCCACCAAGGACAGTCACTCAGGTTCGGAGTTTCTTAGGA CTTGCGGGCTATTACCGCCGGTTCATTGAGAACTTCTCTAAAATTGCTAAGCCAATGACA CAGCTATTGAAGAAGGAAGAAAAGTTTATCTGGTCTGCTGAATGCAATAGGAGTTTTGAA GAACTCAAACGACGGTTGGTGTCTGCACCAGTCTTAATCCTGCCTGATCAGACGAAAGAT TTCCAGGTCTATTGTGATGCATCTCGCCAGGGGCTAGGATGTGTGTTGATGCAGGATGGC AAAGTGGTTTCTTATGCTTCACGGCAGTTGCGTCCTCATGAAGGCAACTACCCGACGCAT GATCTGGAATTAGCCGCAGTTGTTCATGCTTTAAAGATTTGGCGGCACTATCTCATCGGT AACCGTTGTGAGGTATATACAGATCACAAAAGTCTAAAGTACATCTTCACCCAACCTGAT CTGAATCTCCGACAGCGAAGATGGTTGGAGCTAATTAAAGATTATGATATGGGAATACAT TATCATCCCGGCAAGGCTAATGTGGTTGCGGATGCCTTGAGCAGGAAGAGCTACTGCAAT GTTGCATGGGTAGAGCAACTATGTGGTGAGGTTCAACGCGATTTGGAACATCTGAACCTT GGTATAGTTGAGCACGGATTCGTGGCTGCCCTAGAGGCACAGCCCACGCTGGTGGAGCAG GTTCGCATAGCTCAGGCAAGTGATCCTGAAATAGCAGAGCTCAAAAAGAACATGAGGGTT GGAAAAGCCCGAGGTTTTGTTGAGGATGAACAAGGAACAATCTGGATGGGAGAAAGATTG TGTGTACCCGAAAACAAGGAATTAAAAGACCTGATACTAACCGAGGCTCATCAAACTCAA TATTCCATTCATCCCGGTAGTACTAAGATGTACCAAGACCTCAAAGAAAAGTTCTGGTGG GTCAGCATGAGAAGGGAAATAGCTGAGTTCGTAGCACTCTGTGACGTCTGTCAACGAGTA AAGGCAGAACACCAAAGGCCAGCAGGTTTGCTACAGCCACTTCAGATTCCAGAATGGAAG TGGGAAGAAATCGGAATGGATTTCATCACCGGTTTGCCCAGGACGTCATCGGGGCATGAT TCTATTTGGGTAGTCGTTGACCGACTCACCAAAGTGGCTCACTTCATTCCGGTGCACACT ACCTACTCAGGGAAGAAATTAGCAGAACTCTATCTATCAAGAATCATGTGTTTACATGGT GTACCTAAGAAGATCGTGTCTGATCGAGGAAGCCAATTCACTTCAAAGTTCTGGCAGAAA TTACAAGAAGAATTGGGAACCCGGTTGAATTTCAGCACCGCTTACCATCCACAAACAGAT GGCCAGACCGAGCGAGTCAATCAAATACTAGAGGATATGTTGAGAGCTTGTGCGCTTGAC TTTGGTGGGGCATGGGACAAAAGCTTGCCGTATGCTGAGTTCTCGTACAACAACAGTTAC CAAGCTAGTCTGCAGATGGCACCATTTGAAGCACTGTATGGACGGAGGTGTCGTACTCCG CTCTTCTGGGATCAGACAGGGGAACGCCAGTTGTTTGGTACAGAAGTTTTAAATGAGGCA GAAGAGAAAGTCAGAGCTGTTAGGGAAAGATTGAGAATCGCGCAATCTCGGCAGAAAAGC TATGCAGACAACCGCCGAAGGGAGCTCGTTTTCCAAGTAGGGGATTATGTGTATCTCCGT GTCACTCCGCTCAGGGGAGTACACCGCTTCCAAACCAAAGGAAAGTTGGCACCACGCTTT GTGGGACCATATCGGATTTTGGAACGCAGGGGTGAAGTTGCTTACCAGCTTGAGCTTCCC TCCAACATGCTTGGCATCCATAATGTGTTCCACGTCTCTCAGTTGAAGAAATGTTTGAGA GTTCCTGAGGAACAGGCAAGTCCGGATCAAATCGAAATCCAGGAAGACTTGACGTATGTG GAGAAGCCAACTCGTATCCTCGAAACCAGCGAGAGAAAGACCAGAAACAAAGTAATAAGA TTCTGCAAGGTTCAGTGGAGCCACCACTCAGAGGAAGAGGCCACTTGGGAAAGAGAAGAT GAGTTGAAGGCCACCCACCCGCACCTCTTCGCCAGCTCTTCCGAATCTCGGGGTCGAGAT TCCGTTTAA ', 'Protein': ' >LOC_Os01g01240.1 MAVKDRFTGNPGRLTVLSTSGSGFDACGLVGGRYHVSVMETRNGSRDSNNASGSEKPING ARANSASDNSPSPPPENPTIAQVLDNQTQMMTMMMQQMQQQYHQVLQQVQQQAQLQQQNL QFGSPPPQSKLLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQL QGPASIWWDNYMVTRPAGAEVTWTEFRHSFNKAQVPEGIVAQKKREFRSLQQGTRTVIEY LHEFNLLARYAPEDVRTDAERQEKFLSGLDDELTNQLISRDYEDFEKLVDKAIRQEEHCN KINRKRKAAQFRTPQGKSQKPRFTMGRHGGPSTMIIRQHRPYHPGSFNKNHHNGSHNNSE QHSLNPTPSSLKIPAQSVQPALPEQPKRLGEKPELCFNCNKPGHTVGKCPKPRRAGPKFV QARVNHASAEEAQSAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKI PMRVHTPGGGMTTTHYCPSVTVEIQGLIFPANLILLESKDLDVILGMDWLTRHRGVIDCA SRTIKLTNAKGEVVTFQSLVPRKPGISLNQAAGEEQEVAVEKTTKKLEDIPIVREYPEVF PDDLTTMPPKRDIEFRIDLVPGTAPIHKRPYRMGASELAEVKKQVDEQLQKGYIRPSTSP WGAPVIFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGY HQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDD ILIYSKSEEEHEQHLRLVLEKLKEHQLYAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANV ESVTKWTPPRTVTQVRSFLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFE ELKRRLVSAPVLILPDQTKDFQVYCDASRQGLGCVLMQDGKVVSYASRQLRPHEGNYPTH DLELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMGIH YHPGKANVVADALSRKSYCNVAWVEQLCGEVQRDLEHLNLGIVEHGFVAALEAQPTLVEQ VRIAQASDPEIAELKKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQ YSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWK WEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIPVHTTYSGKKLAELYLSRIMCLHG VPKKIVSDRGSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACALD FGGAWDKSLPYAEFSYNNSYQASLQMAPFEALYGRRCRTPLFWDQTGERQLFGTEVLNEA EEKVRAVRERLRIAQSRQKSYADNRRRELVFQVGDYVYLRVTPLRGVHRFQTKGKLAPRF VGPYRILERRGEVAYQLELPSNMLGIHNVFHVSQLKKCLRVPEEQASPDQIEIQEDLTYV EKPTRILETSERKTRNKVIRFCKVQWSHHSEEEATWEREDELKATHPHLFASSSESRGRD SV* '}}, 'OsNippo01g011550': {'msu': {'Genomic Sequence': ' >LOC_Os01g01250 ATGGTGTACGGCGATTACCTCCGCCGCCGGATTGCGCCGCTCCAACGGCGCGCCCGGAGC GCCTGGGAGTACACTGGGCCTGAAGACTACATGCGGACCCACCAGGGAGCCAGATGGGAT TGGGCTCCCGAGGACTTCAAGATCGTGGTCCAAAGGGTGCTGAACCTTAGCTCCGCGGAG GCGTCTCGCATTCCTCAGGAGATCCTCCCCCTCTGCAGCGATCCCGACCGCGCCTCCATT CTAACCATTATGATGGGGGTCGGGGCCTCAGAGGAGAGAGCCCCTAAGGGCCACGACGGC GCGGGCGAGCGCCGCCGGGGGGAACAATCTGCCCCAGGAGGGGGTCGTGCTTCTGGGCCC CGCGTCGGGGTCTCGGGGAGCAGCCGCCCTGCCGACGCCCCGGGGAAGAGGAAGCTGGGA GGAACACCTCCCCCATCTCCTCCCCGAGGGGGCGGGGCGACACGTGCCAGCAGTCGGCGC CCGGAGGGGGCCGCGCCGACGTCGCAGCCCGAGGGGGAGCGCAAAAAGAAGCGGCTCCGC AAGACGGGGGAGACGGAGCCATGCCGGGGAAACCTGATTTCCCCTCCAAGGTGGTCATTC ACCCGTCCCCCTCGCAGGTTCGTCTCACTCTCATTGCAACCATCTTTCTCCAAAAAGAAG TTTTTTCTTGCTCATTTTGTTCGTCTTTTGGTTTTTTCTTCTGCTTCAGCGATGTCCCGT CGCATTCCTCCCGCCACCCCAAGTCCGGCCAGTCCGAGGCCGAAGATCCGGCGGCCGCAG AGGAGCGGAGGCGAGAAGCTGACCGGCGTGAAGCCGCAGATCGCCTTCGGGAAGCTGAAG AGGCCGCCCGGGAGGCCGCCCGGGCTCGCCAAGCCGAAGAAGCTGCTCGGGAGGAGGCCG CCCGGGCTCGCCAAGCCGAAGAAGCTGCTCGGGAGGAGGCCGCCCGGGCTCGCCAGGCTG AGGCGACAGCTGCCGCTGGCGCATCACTTGGGCCCACTCCCTCGGGCGGCCCTCAAGCGA CATCCTCCGAGGCGGCTCGCGACGAGGCTGCTGGCGCATCGCCTGGGCCTACCTCACCGG GCGACGCCCAGGACCAAACGGGCCCGGGGGACATCCCCGAGCCCAGCGCATCCTCCGGGG GGCCAAGCCGCGTCGCCTTTTCCCCAAGGCGGCTCTTCTCCTCTTCTTCTGTCGCCCCGC TGAGCGCCGAGCCCCTTCTGCAGGCCCTGGCCGCCGCAAACACCGCAGTGCTGGATGGGT TCAACACCCAAGTGGAGGCCCTGCGGGCGGAACGAGCGGAGCTCGAGGCCGCATGGGCGC GTGTCGAGGAGGGGCGGCGCTCGGTGGACGCCATGGTGGAGGTGGGCCGTAAGGCCCACC GCCGCCACATCTCGGAGCTTGAAGCCCGCAAGGCGGCGCTGGCGGAGATCGCCCGTGAGG TGGAGGAGGAGCGGGCGGCCGCCCTCATCTCTACCACCGCGATGATCGAGGCGCAAGACA CTCTCCGCCTTCAGCACGCAAGCTGGGAGGCGGAGCTGAAGAAAAAGCTCAACGCCGCCC AAGGGGTCCTTGACTCCGCCGCTGCCCGAGAGCGGCGGGTAACGGAGACTGAAGCGGCGT CTCGGCGGCGCGAGGAGACCCTTGAGGCCCGTGCCATGGCGCTAGAAGAACACGCCGGCG CCGTGGAGAGGGGCTTGACGGACCGCGAGGTCGCCGCTGCTCTCCGGGAGGCGACGCTGG CGGCGCACGAGGCCGCCTGCGCCGAGGAGGATTGCGCGCTCCGCCTCCGCGAGGACGCAC TCGCTGAGCGGGAGCGAGCTCTCGAGGATGCTGAGGCCACGACCAGACGGCTGGCGGACA GCCTGTCCCTTCGCGAGGCGGCGCAGGAGGAGCAGGCGCGCCGCAATCTTGAGTGCGTCC GCACCGAGAGAGCCGCACTGGAGCAGCGGGCTGCTGACCTCGAGGCACGGGAAAAGGAGC TGGACGCGAGGACGCCTGTCGGCGGGGCGGCCGCGGGCGAAAGCGACTTAGCCGCCCGCC TCGCAGCTGCCGAACACACCGTCGCGGAGATGCAGCGAGCGCTGGACTCCTCCACCGGGG AGGCCGAGGCCCTTCGCTTGGCGGGCGAGATTGGGCCCGACATGCTTTGGGATGCGGTCT CCCGCATGAAGCGCGCCGGTCGGCAAGCCGGCCTCTGGAGAGGCCAGACGACGGTGCCCC CCACCAATCTGGAAGGCCTCGCTCCGCACCTCAACAGGATGGCCTGGGTCCTCGAACGAC TCCCCGAGGAGCTCGAGAAGACCATCAAGTCATCCTCGAGGGACCTCGCCCGGGGGGCGG TCGAACTCGTGCTGGCGAGTTACCAGGCCCGGGACCCCAGCTTCTCTCCCTGGATGGCGC TGGAGGAGTTCCCTCCCGGGACCGAGGACGACGCGCGCGCGCGGGTCGGGGATGCTGCCG ACCACATCGTCAACAGCTTCGAGGGCTCGGCCCCTCGGCTCGCGTTCGCCCCTGACTCCG ACGAGGAGGGCGACGCCAGCGGTGAGGACGACGGTGGCGACGAGGCCGGCGACCCGGGCG CATCGGAATGA ', 'CDS': ' >LOC_Os01g01250.1 ATGGTGTACGGCGATTACCTCCGCCGCCGGATTGCGCCGCTCCAACGGCGCGCCCGGAGC GCCTGGGAGTACACTGGGCCTGAAGACTACATGCGGACCCACCAGGGAGCCAGATGGGAT TGGGCTCCCGAGGACTTCAAGATCGTGGTCCAAAGGGTGCTGAACCTTAGCTCCGCGGAG GCGTCTCGCATTCCTCAGGAGATCCTCCCCCTCTGCAGCGATCCCGACCGCGCCTCCATT CTAACCATTATGATGGGGGTCGGGGCCTCAGAGGAGAGAGCCCCTAAGGGCCACGACGGC GCGGGCGAGCGCCGCCGGGGGGAACAATCTGCCCCAGGAGGGGGTCGTGCTTCTGGGCCC CGCGTCGGGGTCTCGGGGAGCAGCCGCCCTGCCGACGCCCCGGGGAAGAGGAAGCTGGGA GGAACACCTCCCCCATCTCCTCCCCGAGGGGGCGGGGCGACACGTGCCAGCAGTCGGCGC CCGGAGGGGGCCGCGCCGACGTCGCAGCCCGAGGGGGAGCGCAAAAAGAAGCGGCTCCGC AAGACGGGGGAGACGGAGCCATGCCGGGGAAACCTGATTTCCCCTCCAAGGTGGTCATTC ACCCGTCCCCCTCGCAGCGATGTCCCGTCGCATTCCTCCCGCCACCCCAAGTCCGGCCAG TCCGAGGCCGAAGATCCGGCGGCCGCAGAGGAGCGGAGGCGAGAAGCTGACCGGCGTGAA GCCGCAGATCGCCTTCGGGAAGCTGAAGAGGCCGCCCGGGAGGCCGCCCGGGCTCGCCAA GCCGAAGAAGCTGCTCGGGAGGAGGCCGCCCGGGCTCGCCAAGCCGAAGAAGCTGCTCGG GAGGAGGCCGCCCGGGCTCGCCAGGCTGAGGCGACAGCTGCCGCTGGCGCATCACTTGGG CCCACTCCCTCGGGCGGCCCTCAAGCGACATCCTCCGAGGCGGCTCGCGACGAGGCTGCT GGCGCATCGCCTGGGCCTACCTCACCGGGCGACGCCCAGGACCAAACGGGCCCGGGGGAC ATCCCCGAGCCCAGCGCATCCTCCGGGGGGCCAAGCCGCGTCGCCTTTTCCCCAAGGCGG CTCTTCTCCTCTTCTTCTGTCGCCCCGCTGAGCGCCGAGCCCCTTCTGCAGGCCCTGGCC GCCGCAAACACCGCAGTGCTGGATGGGTTCAACACCCAAGTGGAGGCCCTGCGGGCGGAA CGAGCGGAGCTCGAGGCCGCATGGGCGCGTGTCGAGGAGGGGCGGCGCTCGGTGGACGCC ATGGTGGAGGTGGGCCGTAAGGCCCACCGCCGCCACATCTCGGAGCTTGAAGCCCGCAAG GCGGCGCTGGCGGAGATCGCCCGTGAGGTGGAGGAGGAGCGGGCGGCCGCCCTCATCTCT ACCACCGCGATGATCGAGGCGCAAGACACTCTCCGCCTTCAGCACGCAAGCTGGGAGGCG GAGCTGAAGAAAAAGCTCAACGCCGCCCAAGGGGTCCTTGACTCCGCCGCTGCCCGAGAG CGGCGGGTAACGGAGACTGAAGCGGCGTCTCGGCGGCGCGAGGAGACCCTTGAGGCCCGT GCCATGGCGCTAGAAGAACACGCCGGCGCCGTGGAGAGGGGCTTGACGGACCGCGAGGTC GCCGCTGCTCTCCGGGAGGCGACGCTGGCGGCGCACGAGGCCGCCTGCGCCGAGGAGGAT TGCGCGCTCCGCCTCCGCGAGGACGCACTCGCTGAGCGGGAGCGAGCTCTCGAGGATGCT GAGGCCACGACCAGACGGCTGGCGGACAGCCTGTCCCTTCGCGAGGCGGCGCAGGAGGAG CAGGCGCGCCGCAATCTTGAGTGCGTCCGCACCGAGAGAGCCGCACTGGAGCAGCGGGCT GCTGACCTCGAGGCACGGGAAAAGGAGCTGGACGCGAGGACGCCTGTCGGCGGGGCGGCC GCGGGCGAAAGCGACTTAGCCGCCCGCCTCGCAGCTGCCGAACACACCGTCGCGGAGATG CAGCGAGCGCTGGACTCCTCCACCGGGGAGGCCGAGGCCCTTCGCTTGGCGGGCGAGATT GGGCCCGACATGCTTTGGGATGCGGTCTCCCGCATGAAGCGCGCCGGTCGGCAAGCCGGC CTCTGGAGAGGCCAGACGACGGTGCCCCCCACCAATCTGGAAGGCCTCGCTCCGCACCTC AACAGGATGGCCTGGGTCCTCGAACGACTCCCCGAGGAGCTCGAGAAGACCATCAAGTCA TCCTCGAGGGACCTCGCCCGGGGGGCGGTCGAACTCGTGCTGGCGAGTTACCAGGCCCGG GACCCCAGCTTCTCTCCCTGGATGGCGCTGGAGGAGTTCCCTCCCGGGACCGAGGACGAC GCGCGCGCGCGGGTCGGGGATGCTGCCGACCACATCGTCAACAGCTTCGAGGGCTCGGCC CCTCGGCTCGCGTTCGCCCCTGACTCCGACGAGGAGGGCGACGCCAGCGGTGAGGACGAC GGTGGCGACGAGGCCGGCGACCCGGGCGCATCGGAATGA ', 'Protein': ' >LOC_Os01g01250.1 MVYGDYLRRRIAPLQRRARSAWEYTGPEDYMRTHQGARWDWAPEDFKIVVQRVLNLSSAE ASRIPQEILPLCSDPDRASILTIMMGVGASEERAPKGHDGAGERRRGEQSAPGGGRASGP RVGVSGSSRPADAPGKRKLGGTPPPSPPRGGGATRASSRRPEGAAPTSQPEGERKKKRLR KTGETEPCRGNLISPPRWSFTRPPRSDVPSHSSRHPKSGQSEAEDPAAAEERRREADRRE AADRLREAEEAAREAARARQAEEAAREEAARARQAEEAAREEAARARQAEATAAAGASLG PTPSGGPQATSSEAARDEAAGASPGPTSPGDAQDQTGPGDIPEPSASSGGPSRVAFSPRR LFSSSSVAPLSAEPLLQALAAANTAVLDGFNTQVEALRAERAELEAAWARVEEGRRSVDA MVEVGRKAHRRHISELEARKAALAEIAREVEEERAAALISTTAMIEAQDTLRLQHASWEA ELKKKLNAAQGVLDSAAARERRVTETEAASRRREETLEARAMALEEHAGAVERGLTDREV AAALREATLAAHEAACAEEDCALRLREDALAERERALEDAEATTRRLADSLSLREAAQEE QARRNLECVRTERAALEQRAADLEAREKELDARTPVGGAAAGESDLAARLAAAEHTVAEM QRALDSSTGEAEALRLAGEIGPDMLWDAVSRMKRAGRQAGLWRGQTTVPPTNLEGLAPHL NRMAWVLERLPEELEKTIKSSSRDLARGAVELVLASYQARDPSFSPWMALEEFPPGTEDD ARARVGDAADHIVNSFEGSAPRLAFAPDSDEEGDASGEDDGGDEAGDPGASE* '}}, 'OsNippo01g011600': {'msu': {'Genomic Sequence': ' >LOC_Os01g01260 ATGGCTGAGCAAGGAAAAGCGCACGACCTCTCTCCGAGTGTGAGCGGCGACGACGGGGAG CCGAATCCACGCCGTCGAGCTCGTACTCCCCCACCTCCTCCGCGCCAAAGCCCTAAGCAG GGGGAGGCGCTTGAGAGGGTTGATAAATCCGCAGCATCACCGATCGCGGGTGATGCAGGA GAACGGCGAGATGGGGAGCGGCGCCTCCTCGTCTACGGCGACGGCAGCACGCCTCAGGGT GCGCTTCAGGCTGCTGGCGCGCTCCTACGACACCCGCCTGTCGTCCATGACCCGGAGTCT CCAGCCCAACGATGGCTGGAAGACGTGGCCAACTTGGTCATGACGGCACAGCAGCGCCTG GGTGCTGGTGGACGGTCCGCCACCACCAAGACCTCCGGCGCCGCTACCACCGGCTCCGTG TCGTCAAGGCGGAGGGCGCGGCGAGCGGCGGCGGCTGCACGGCATTCGGCTGCCACTCCC TCGTCGACACCCTCGACTCGGGAGGATCAGCATGGGGAGCCGGATGCCCGCCTCGACATC GAGCGCCGGCGTAATAGCCGGCGTACTCCCCGTGCAACGGAGGGCGCCTCTTCGTCCAGA GTGTCACCTCGACATGGACGTGAGGACCAGCCCTCCGTGCCCCCGGCTGGTGGTGTCGGC TGTAGAGCCTTTGTGGCGAGTCTTCGGAATGTCCGTTGGCCCCCAAGGTTCCGGCCCACC ATTACCGAGAAGTACGATGGGAGCGTCAATCCCACCGAGTTTCTCCAGGTCTATACGACC GGGATCGAGGCCGCTGGGGGTGACGACAGGGTCATGGCGAACTTCTTTCCCATGGCCCTA AAAGGACAGGCGCGGGGTTGGCTGATGAACCTGCCACCCGCGTCGGTCCACTCCTGGGAA GATTTGTGCCAACAGTTCACCATGAACTTCCAAGGCACATATCCGCGCCCAGGCGAAGAA GCGGACTTGCATGCAGTGCAGCGAGGCGATGATGAATCGCTTCGCTCGTACATTCAGCGG TTTTGCCAAGTCCGCAACACTATACCATGCATCCCTGCACACGCGGTGATCTACGCGTTC AGGGGGGGCGTGCGGCACAACCGCATGCTCGAAAAGATCGCTTCCAAAGAGCCCCAGACT ACCGCGGAGCTTTTTCAGCTCGCGGACCGAGTGGCTCGTAAGGAGGAAGCGTGGACATGG AACTCCTCCGGTTCCGGAGTGGCAGCTTCGGCCGCCCCCGGATCCGCCGCTCAGACAGGG CGGCGTGACAGGAGGAGGAAGAAGAGGTCGGACCGCTCCGGCGACGAGGGTCATGTCCTC GCCGTCGAGGGCGCTCCGCGGGCCACCCGAAAGGGGAGGCCTGTGAGCGACAAGAAGAAA GAGGCTGGTACTCCCAGCAGGGAGCGCCCCGCCGGCAGGTGGTGCTCCGTCCACAACACC TCCCTCCACGATCTCGCGGACTGTCGCGCAGTCAAAAACCTGGCTGAGCGAACGAGGAAG TGGGAGGAGGACAGGAGGCAGGAACGCCATGAGGGCAAGTCCCCGGCGGTTCCTTCCGGC AAACGGCGAAGTGAGGCCAAGCAGAAGGCCCCCGCCGTTGACATCGATGATGGTGATGAT GACCTAGGTTTCCAAGAACCTGGGGCCACCATCGCCACCGTCGATGGAGGAGCGTGTGCT CACGTCTCTCGCCGGAGCTTCAAGGCTATGAAGCGAGAGCTTCTGGCCATGGCCCCTACT CATGAGGCGACGCGTCGGGCGCGGTGGTCGGAGGTTGCTCTCACTTTCGACCAGACCGAC CACCCACCGTGCATTGCCCGGGGAGGGCAGGTTGCGATGGTGGTTTCTCCCACCATCTGC AACGTGAAGTTGGGACGTGTCCTCATAGATGGAGGAGCGGCTCTCAACATCCTTTCCCCC GCGGCCTTTGATGCTATCAAGGCCCCGGGGATGGTGCTCCGACCGTCCCAGCCGATTATC GGTGTGACGCCGGGGCACACGTGGCCATTAGGTCACATCGACCTACCGGTCACCTTCGGT GGACCCGCCAACTTCCGCACAGAGCGGGTGAGCTTCGATGTGGCGGACCTCAGTCTGCCC TACAACGCGGTCCTAGGGAGGCCCGCGTTGGTGAAGTTCATGGCGGCGGTCCACTACGCC TACCTCCAGATGAAGATGCCGGGCCCTGGTGGCCCCATCTCTGTCCGTGGCGACCTTAAA GTCGCGCTCGCTTGCATGGAGCAACGCGCGGACCACCTCGCTGCCGCGACCAAGCCCGAG GGTGGTGACGAGAGGCTTGGCGCCTCTGCCCCCACCGCCCCGAGGCAGCGGATGGCCACA TGCGACGAGGTCCCGGTCAAGGAGGTTGCCTTGGGCGACGGCCCATCCAAGACCACACGG ATCGGTGGTCTTCTGGATGGCAAATAGGAAGACGCGCTCGTCTCCTTCCTGCGGGCAAAC GCTGATGTCTTCGCATGGAGACCAGCGGACATGCCCGGGGTCCCCAGGGAGGTGATTGAG CACCGTCTCGCCGTGCGGCCGGGCGCAAGGCCGGTCCGGCAGAAAGTACGGCGGCAAGCC CCGGAGCGTCAAGCCTTCATCCGCGAGGAGGTGGCGAGACTTCTAGAGGCCGGATTCATC CGTGAAGTCATCCATCCGGAGTGGCTGGCGAACCCGGTGGTCGTTCCCAAGGCGAACGGC AAGCTTCGGATGTGCATCGACTACACCGACCTTAACAAGGCATGTCCTAAGGATCCTTAC CCCCTGCCTCGCATAGATCAGATCGTCGACTCCACTGCGGGGTGCGACCTTTTGTGTTTT CTAGATGCATACTCTGGTTATCATCAGATTCGCATGGCTAGGGAGGATGAGGAAAAAACT GCGTTCATTACCCCCGTAGGAACCTATTGTTATACATCAATGCCCTTCGGGTTAAAGAAT GCAGGTCCTACTTTTCAACGTACTACTCGAATTTCTTTGGGTAGCCAAATAGGGCGTAAT GTTGAGGCTTATGTCGATGACTTGGTTGTAAAAACGCGCAACCAAGAAACTTTACTTTCA GATCTAGCGGAAACTTTTGGGAACCTCCGCTCCGCCCGCATAAAACTGAACCCCGATAAG TGTGTGTTTGGTGTACCTGCGGGCAAGCTTCTCGGGTTTTTGATCTCTGCCCGAGGCATT GAGGCCAATCCCGAGAAGATACGAGCTATAGAGCGGATCCGCCCCCCCAGCAAACTTAGG GATGTGCAGTGCGTCACTGGTTGCATGGCCGCCCTAAGTCGTTTCATATCGAGGCTGGGA GAGAAGGCGCTGCCCTTGTTTAAGCTCCTCAAGCGCTCAGGGCCGTTTACTTGGACGGAG GAAGCTGAAAATGCCCTTGCCCAGTTGAAGGCGTATCTCAGCTCTCCTCCAGTTCTGGTC GCCCCGGAGCCAAATGAGTCCCTGCTACTTTACTTAGCGGCGACCCCCCAAGTGGTTAGT GCGGCGTTAGTTGTGGAGCGCGATGAGGACAATCCTCATCCTGCGCACCCCTACTCCGTG CCGACTTGGCCCGGGAGCAAGCAGGGAGGAGAGGCCCCCGAGTCAAACGGTGGCCTAAGG CCCCTGACGACCGGAGACGGCCCTCTACCCGCTTGTCAGACGGTGCTGGGTGCCCCCGAC CCTCAGGAAGGCCCCGAGGCCACTGCGGGAAGGCCGCACTTAACGCCCTCTGACCCCGAG GCTAACCCTGTGCTGACTCGACCCGGGAAAGAGCAGGAAGAAGAGGCCCCCGAGCCGAAC GGAGGCCAGAGGCCCCTGACGACCGGAGTTGGCCCTTTGCCCGCTTGTCCGACGATGCCA GGAGCCCCCGACCCCCAGGACGGCCCCGAGGCCACTGAGGGAAGGCCGCCCCTTTCATCC TCCGACCCCGAGGTCATCGGCACAGAAGACAAGTGCGCCCCGAAAGGCCACTTGAACGAA AAACGCCCCGGGGGTACGGCCCCTAGCGAAGAGGATCGGCCCCGCCGAAAGGTGCAGCGG CCTGTCTACTTTGTTAGTGAGGCCCTCCGGGACGCCAAGACCCGATACCCGCAGGCCCAG AAGATGCTTTACGCTATTCTGATGGCCTCGAGGAAACTGCGCCATTATTTCCAGGCGCAT CGGGTCACTGTGGTTACGTCTTACCCCCTCGGGCAAATCTTGCATAATCGAGAGGGTACA GGACGAGTGGTAAAATGGGCAATCGAGCTTTCTGAGTTCGATCTGCACTTTGAACCACGC CACGCTATCAAGAGCCAGGCCCTCGCCGATTTTGTGGCAGAGTGGACCCCGGCTCCAGAG ACCGTCTCAATCCCCGAGGCCAGCACGAACCCCTCTCAGCTGCCTCACACCGCCCACTGG GTGATGCAGTTCGACGGTTCTCTGTCTCTCCAGGGCGCCGGTGCGGGGGTCACGTTGACC TCCCCAAACGGAGACGTCCTCAGATACCTGGTCCGTCTCGACTTTCGAGCGACCAATAAT ATGGCAGAGTACGAGGGACTCCTTGCCGGACTCAGGGTGGCAGCTGGGCTGGGGATCCGC CGCCTCCTGGTGTTAGGCGACTCTCAGCTGGTTGTTAACCAAGTCTGTAAGGAGTACCGG TGCTCTGACCCGCAGATGGACGCCTACGTACGCCAAGTGCGGCGTATGGAGCGCCATTTT GATGGGATAGAGCTTCGGCATGTACCCAGACGGGATAACATGGTTGCCGACGAACTCTCA CGGCTCGCGTCCTCGCGAGCCCAGACCCCACCGGGCGCCTTTGAAGAAAGGCTTACCCAG TCGTCGGCGCGACCCGACCCCTTAGGGGAGACGGATGCGCCTGACCGGCCCCCGAGGCCC GTCGGAGTCCAGGCCTCGGGACCCGAAGAGAGCGCTCCAAGCTCCCTTAGATTGATTGCT TGGATCTCTGAGATCCAAACATACCTCACAGATAAGACTCTACCTGAGGACCGCGAAGGG AGTGAACGCGTACAACGCATTTCCAAACGCTATGTGCTGATAGAAGGGACCCTCTATCGG CGCGCGGCTAACGGAATCCTCCTGAAGTGCATTCCTCAGGAACAAGGCGTTGAGCTTCTT GCTGACATCCATGAGGGCGAGTGCGGAGCCCATTCCGCCTCGCGTACCCTGGTTGGCAAG GCCTTTCGTCAAGGATTTTATTGGCCGACGGCTCTCAATGACGCGGTCGATCTGGTCCGG CGATGCAGAGCGTGTCAGTTCCACGCCAAGCAAATCCATCAGCCGGCCCAGGCCCTGCAG ATCATACCGCTGTCATGGCCATTTGCTGTCTGGGGGCTTGATATCCTGGGACCGTTCAAA CGGGCCCCGGGCGGGTTTGAGTATCTGTATGTTGCGATCGACAAGTTCACTAAGTGGCCC GAGGCTTATCCGGTTGTCAAGATCGATAAGCACTCTGCTCTTAAATTCATTAAGGGCATC ACGGCCCGTTTTGGAGTGCCTAATCGTATTATTACGGATAATGGCACCCAATTCACTAGT GAACTCTTCGGCGACTACTGCGAAGACATGGGCATCAAGCTCTGCTTCGCCTCACCTGCC CACCCCAGAAGCAATGGCCAAGTGGAGCGCGCCAATGCAGAAATCCTTAAAGGCCTCAAA ACCAAGACCTTCAACATTCTCAAGAAGCACGGCGATTCATGGATCGAGGAGTTGCCAGCG GTGCTCTGGGCGAACCGAACCACACCAAGCCGAGCGACCGGGGAAACGCCTTTCTTCCTC GTCTACGGCGCAGAAGCGGTTCTCCCATCCGAGCTCACCCTGAGGTCTCCTCGGGCCACC ATGTACTGCGAGGCTGATCAAGATCAGCTTCGTAGAGATGACCTCGACTACTTGGAAGAG CGAAGGCGGCGCGCGGCCCTCCGAGCTGCGCGCTACCAGCAGAGCCTGCGGCGCTACCAT CAGCGCCACGTCCGGGCCCGATCACTCTGCGTCGACGACCTCGTCCTACGCCGCGTCCAA ACGCGTGCTGGATTGAGCAAGCTCTCACCAATGTGGGAGGGTCCGTATCGAGTGATCGGT GTCCCCCGGCCGGGCTCGGTACGGCTGGCCACGGGCGACGGCACGGAGCTGCCAAACCCG TGGAACATCGAACACCTTCGTCGCTTCTACCCCTGA ', 'CDS': ' >LOC_Os01g01260.1 ATGGCTGAGCAAGGAAAAGCGCACGACCTCTCTCCGAGTGTGAGCGGCGACGACGGGGAG CCGAATCCACGCCGTCGAGCTCGTACTCCCCCACCTCCTCCGCGCCAAAGCCCTAAGCAG GGGGAGGCGCTTGAGAGGGTTGATAAATCCGCAGCATCACCGATCGCGGGTGATGCAGGA GAACGGCGAGATGGGGAGCGGCGCCTCCTCGTCTACGGCGACGGCAGCACGCCTCAGGGT GCGCTTCAGGCTGCTGGCGCGCTCCTACGACACCCGCCTGTCGTCCATGACCCGGAGTCT CCAGCCCAACGATGGCTGGAAGACGTGGCCAACTTGGTCATGACGGCACAGCAGCGCCTG GGTGCTGGTGGACGGTCCGCCACCACCAAGACCTCCGGCGCCGCTACCACCGGCTCCGTG TCGTCAAGGCGGAGGGCGCGGCGAGCGGCGGCGGCTGCACGGCATTCGGCTGCCACTCCC TCGTCGACACCCTCGACTCGGGAGGATCAGCATGGGGAGCCGGATGCCCGCCTCGACATC GAGCGCCGGCGTAATAGCCGGCGTACTCCCCGTGCAACGGAGGGCGCCTCTTCGTCCAGA GTGTCACCTCGACATGGACGTGAGGACCAGCCCTCCGTGCCCCCGGCTGGTGGTGTCGGC TGTAGAGCCTTTGTGGCGAGTCTTCGGAATGTCCGTTGGCCCCCAAGGTTCCGGCCCACC ATTACCGAGAAGTACGATGGGAGCGTCAATCCCACCGAGTTTCTCCAGGTCTATACGACC GGGATCGAGGCCGCTGGGGGTGACGACAGGGTCATGGCGAACTTCTTTCCCATGGCCCTA AAAGGACAGGCGCGGGGTTGGCTGATGAACCTGCCACCCGCGTCGGTCCACTCCTGGGAA GATTTGTGCCAACAGTTCACCATGAACTTCCAAGGCACATATCCGCGCCCAGGCGAAGAA GCGGACTTGCATGCAGTGCAGCGAGGCGATGATGAATCGCTTCGCTCGTACATTCAGCGG TTTTGCCAAGTCCGCAACACTATACCATGCATCCCTGCACACGCGGTGATCTACGCGTTC AGGGGGGGCGTGCGGCACAACCGCATGCTCGAAAAGATCGCTTCCAAAGAGCCCCAGACT ACCGCGGAGCTTTTTCAGCTCGCGGACCGAGTGGCTCGTAAGGAGGAAGCGTGGACATGG AACTCCTCCGGTTCCGGAGTGGCAGCTTCGGCCGCCCCCGGATCCGCCGCTCAGACAGGG CGGCGTGACAGGAGGAGGAAGAAGAGGTCGGACCGCTCCGGCGACGAGGGTCATGTCCTC GCCGTCGAGGGCGCTCCGCGGGCCACCCGAAAGGGGAGGCCTGTGAGCGACAAGAAGAAA GAGGCTGGTACTCCCAGCAGGGAGCGCCCCGCCGGCAGGTGGTGCTCCGTCCACAACACC TCCCTCCACGATCTCGCGGACTGTCGCGCAGTCAAAAACCTGGCTGAGCGAACGAGGAAG TGGGAGGAGGACAGGAGGCAGGAACGCCATGAGGGCAAGTCCCCGGCGGTTCCTTCCGGC AAACGGCGAAGTGAGGCCAAGCAGAAGGCCCCCGCCGTTGACATCGATGATGGTGATGAT GACCTAGGTTTCCAAGAACCTGGGGCCACCATCGCCACCGTCGATGGAGGAGCGTGTGCT CACGTCTCTCGCCGGAGCTTCAAGGCTATGAAGCGAGAGCTTCTGGCCATGGCCCCTACT CATGAGGCGACGCGTCGGGCGCGGTGGTCGGAGGTTGCTCTCACTTTCGACCAGACCGAC CACCCACCGTGCATTGCCCGGGGAGGGCAGGTTGCGATGGTGGTTTCTCCCACCATCTGC AACGTGAAGTTGGGACGTGTCCTCATAGATGGAGGAGCGGCTCTCAACATCCTTTCCCCC GCGGCCTTTGATGCTATCAAGGCCCCGGGGATGGTGCTCCGACCGTCCCAGCCGATTATC GGTGTGACGCCGGGGCACACGTGGCCATTAGGTCACATCGACCTACCGGTCACCTTCGGT GGACCCGCCAACTTCCGCACAGAGCGGGTGAGCTTCGATGTGGCGGACCTCAGTCTGCCC TACAACGCGGTCCTAGGGAGGCCCGCGTTGGTGAAGTTCATGGCGGCGGTCCACTACGCC TACCTCCAGATGAAGATGCCGGGCCCTGGTGGCCCCATCTCTGTCCGTGGCGACCTTAAA GTCGCGCTCGCTTGCATGGAGCAACGCGCGGACCACCTCGCTGCCGCGACCAAGCCCGAG GGTGGTGACGAGAGGCTTGGCGCCTCTGCCCCCACCGCCCCGAGGCAGCGGATGGCCACA TGCGACGAGGTCCCGGAAGACGCGCTCGTCTCCTTCCTGCGGGCAAACGCTGATGTCTTC GCATGGAGACCAGCGGACATGCCCGGGGTCCCCAGGGAGGTGATTGAGCACCGTCTCGCC GTGCGGCCGGGCGCAAGGCCGGTCCGGCAGAAAGTACGGCGGCAAGCCCCGGAGCGTCAA GCCTTCATCCGCGAGGAGGTGGCGAGACTTCTAGAGGCCGGATTCATCCGTGAAGTCATC CATCCGGAGTGGCTGGCGAACCCGGTGGTCGTTCCCAAGGCGAACGGCAAGCTTCGGATG TGCATCGACTACACCGACCTTAACAAGGCATGTCCTAAGGATCCTTACCCCCTGCCTCGC ATAGATCAGATCGTCGACTCCACTGCGGGGTGCGACCTTTTGTGTTTTCTAGATGCATAC TCTGGTTATCATCAGATTCGCATGGCTAGGGAGGATGAGGAAAAAACTGCGTTCATTACC CCCGTAGGAACCTATTGTTATACATCAATGCCCTTCGGGTTAAAGAATGCAGGTCCTACT TTTCAACGTACTACTCGAATTTCTTTGGGTAGCCAAATAGGGCGTAATGTTGAGGCTTAT GTCGATGACTTGGTTGTAAAAACGCGCAACCAAGAAACTTTACTTTCAGATCTAGCGGAA ACTTTTGGGAACCTCCGCTCCGCCCGCATAAAACTGAACCCCGATAAGTGTGTGTTTGGT GTACCTGCGGGCAAGCTTCTCGGGTTTTTGATCTCTGCCCGAGGCATTGAGGCCAATCCC GAGAAGATACGAGCTATAGAGCGGATCCGCCCCCCCAGCAAACTTAGGGATGTGCAGTGC GTCACTGGTTGCATGGCCGCCCTAAGTCGTTTCATATCGAGGCTGGGAGAGAAGGCGCTG CCCTTGTTTAAGCTCCTCAAGCGCTCAGGGCCGTTTACTTGGACGGAGGAAGCTGAAAAT GCCCTTGCCCAGTTGAAGGCGTATCTCAGCTCTCCTCCAGTTCTGGTCGCCCCGGAGCCA AATGAGTCCCTGCTACTTTACTTAGCGGCGACCCCCCAAGTGGTTAGTGCGGCGTTAGTT GTGGAGCGCGATGAGGACAATCCTCATCCTGCGCACCCCTACTCCGTGCCGACTTGGCCC GGGAGCAAGCAGGGAGGAGAGGCCCCCGAGTCAAACGGTGGCCTAAGGCCCCTGACGACC GGAGACGGCCCTCTACCCGCTTGTCAGACGGTGCTGGGTGCCCCCGACCCTCAGGAAGGC CCCGAGGCCACTGCGGGAAGGCCGCACTTAACGCCCTCTGACCCCGAGGCTAACCCTGTG CTGACTCGACCCGGGAAAGAGCAGGAAGAAGAGGCCCCCGAGCCGAACGGAGGCCAGAGG CCCCTGACGACCGGAGTTGGCCCTTTGCCCGCTTGTCCGACGATGCCAGGAGCCCCCGAC CCCCAGGACGGCCCCGAGGCCACTGAGGGAAGGCCGCCCCTTTCATCCTCCGACCCCGAG GTCATCGGCACAGAAGACAAGTGCGCCCCGAAAGGCCACTTGAACGAAAAACGCCCCGGG GGTACGGCCCCTAGCGAAGAGGATCGGCCCCGCCGAAAGGTGCAGCGGCCTGTCTACTTT GTTAGTGAGGCCCTCCGGGACGCCAAGACCCGATACCCGCAGGCCCAGAAGATGCTTTAC GCTATTCTGATGGCCTCGAGGAAACTGCGCCATTATTTCCAGGCGCATCGGGTCACTGTG GTTACGTCTTACCCCCTCGGGCAAATCTTGCATAATCGAGAGGGTACAGGACGAGTGGTA AAATGGGCAATCGAGCTTTCTGAGTTCGATCTGCACTTTGAACCACGCCACGCTATCAAG AGCCAGGCCCTCGCCGATTTTGTGGCAGAGTGGACCCCGGCTCCAGAGACCGTCTCAATC CCCGAGGCCAGCACGAACCCCTCTCAGCTGCCTCACACCGCCCACTGGGTGATGCAGTTC GACGGTTCTCTGTCTCTCCAGGGCGCCGGTGCGGGGGTCACGTTGACCTCCCCAAACGGA GACGTCCTCAGATACCTGGTCCGTCTCGACTTTCGAGCGACCAATAATATGGCAGAGTAC GAGGGACTCCTTGCCGGACTCAGGGTGGCAGCTGGGCTGGGGATCCGCCGCCTCCTGGTG TTAGGCGACTCTCAGCTGGTTGTTAACCAAGTCTGTAAGGAGTACCGGTGCTCTGACCCG CAGATGGACGCCTACGTACGCCAAGTGCGGCGTATGGAGCGCCATTTTGATGGGATAGAG CTTCGGCATGTACCCAGACGGGATAACATGGTTGCCGACGAACTCTCACGGCTCGCGTCC TCGCGAGCCCAGACCCCACCGGGCGCCTTTGAAGAAAGGCTTACCCAGTCGTCGGCGCGA CCCGACCCCTTAGGGGAGACGGATGCGCCTGACCGGCCCCCGAGGCCCGTCGGAGTCCAG GCCTCGGGACCCGAAGAGAGCGCTCCAAGCTCCCTTAGATTGATTGCTTGGATCTCTGAG ATCCAAACATACCTCACAGATAAGACTCTACCTGAGGACCGCGAAGGGAGTGAACGCGTA CAACGCATTTCCAAACGCTATGTGCTGATAGAAGGGACCCTCTATCGGCGCGCGGCTAAC GGAATCCTCCTGAAGTGCATTCCTCAGGAACAAGGCGTTGAGCTTCTTGCTGACATCCAT GAGGGCGAGTGCGGAGCCCATTCCGCCTCGCGTACCCTGGTTGGCAAGGCCTTTCGTCAA GGATTTTATTGGCCGACGGCTCTCAATGACGCGGTCGATCTGGTCCGGCGATGCAGAGCG TGTCAGTTCCACGCCAAGCAAATCCATCAGCCGGCCCAGGCCCTGCAGATCATACCGCTG TCATGGCCATTTGCTGTCTGGGGGCTTGATATCCTGGGACCGTTCAAACGGGCCCCGGGC GGGTTTGAGTATCTGTATGTTGCGATCGACAAGTTCACTAAGTGGCCCGAGGCTTATCCG GTTGTCAAGATCGATAAGCACTCTGCTCTTAAATTCATTAAGGGCATCACGGCCCGTTTT GGAGTGCCTAATCGTATTATTACGGATAATGGCACCCAATTCACTAGTGAACTCTTCGGC GACTACTGCGAAGACATGGGCATCAAGCTCTGCTTCGCCTCACCTGCCCACCCCAGAAGC AATGGCCAAGTGGAGCGCGCCAATGCAGAAATCCTTAAAGGCCTCAAAACCAAGACCTTC AACATTCTCAAGAAGCACGGCGATTCATGGATCGAGGAGTTGCCAGCGGTGCTCTGGGCG AACCGAACCACACCAAGCCGAGCGACCGGGGAAACGCCTTTCTTCCTCGTCTACGGCGCA GAAGCGGTTCTCCCATCCGAGCTCACCCTGAGGTCTCCTCGGGCCACCATGTACTGCGAG GCTGATCAAGATCAGCTTCGTAGAGATGACCTCGACTACTTGGAAGAGCGAAGGCGGCGC GCGGCCCTCCGAGCTGCGCGCTACCAGCAGAGCCTGCGGCGCTACCATCAGCGCCACGTC CGGGCCCGATCACTCTGCGTCGACGACCTCGTCCTACGCCGCGTCCAAACGCGTGCTGGA TTGAGCAAGCTCTCACCAATGTGGGAGGGTCCGTATCGAGTGATCGGTGTCCCCCGGCCG GGCTCGGTACGGCTGGCCACGGGCGACGGCACGGAGCTGCCAAACCCGTGGAACATCGAA CACCTTCGTCGCTTCTACCCCTGA ', 'Protein': ' >LOC_Os01g01260.1 MAEQGKAHDLSPSVSGDDGEPNPRRRARTPPPPPRQSPKQGEALERVDKSAASPIAGDAG ERRDGERRLLVYGDGSTPQGALQAAGALLRHPPVVHDPESPAQRWLEDVANLVMTAQQRL GAGGRSATTKTSGAATTGSVSSRRRARRAAAAARHSAATPSSTPSTREDQHGEPDARLDI ERRRNSRRTPRATEGASSSRVSPRHGREDQPSVPPAGGVGCRAFVASLRNVRWPPRFRPT ITEKYDGSVNPTEFLQVYTTGIEAAGGDDRVMANFFPMALKGQARGWLMNLPPASVHSWE DLCQQFTMNFQGTYPRPGEEADLHAVQRGDDESLRSYIQRFCQVRNTIPCIPAHAVIYAF RGGVRHNRMLEKIASKEPQTTAELFQLADRVARKEEAWTWNSSGSGVAASAAPGSAAQTG RRDRRRKKRSDRSGDEGHVLAVEGAPRATRKGRPVSDKKKEAGTPSRERPAGRWCSVHNT SLHDLADCRAVKNLAERTRKWEEDRRQERHEGKSPAVPSGKRRSEAKQKAPAVDIDDGDD DLGFQEPGATIATVDGGACAHVSRRSFKAMKRELLAMAPTHEATRRARWSEVALTFDQTD HPPCIARGGQVAMVVSPTICNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRPSQPII GVTPGHTWPLGHIDLPVTFGGPANFRTERVSFDVADLSLPYNAVLGRPALVKFMAAVHYA YLQMKMPGPGGPISVRGDLKVALACMEQRADHLAAATKPEGGDERLGASAPTAPRQRMAT CDEVPEDALVSFLRANADVFAWRPADMPGVPREVIEHRLAVRPGARPVRQKVRRQAPERQ AFIREEVARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDYTDLNKACPKDPYPLPR IDQIVDSTAGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPVGTYCYTSMPFGLKNAGPT FQRTTRISLGSQIGRNVEAYVDDLVVKTRNQETLLSDLAETFGNLRSARIKLNPDKCVFG VPAGKLLGFLISARGIEANPEKIRAIERIRPPSKLRDVQCVTGCMAALSRFISRLGEKAL PLFKLLKRSGPFTWTEEAENALAQLKAYLSSPPVLVAPEPNESLLLYLAATPQVVSAALV VERDEDNPHPAHPYSVPTWPGSKQGGEAPESNGGLRPLTTGDGPLPACQTVLGAPDPQEG PEATAGRPHLTPSDPEANPVLTRPGKEQEEEAPEPNGGQRPLTTGVGPLPACPTMPGAPD PQDGPEATEGRPPLSSSDPEVIGTEDKCAPKGHLNEKRPGGTAPSEEDRPRRKVQRPVYF VSEALRDAKTRYPQAQKMLYAILMASRKLRHYFQAHRVTVVTSYPLGQILHNREGTGRVV KWAIELSEFDLHFEPRHAIKSQALADFVAEWTPAPETVSIPEASTNPSQLPHTAHWVMQF DGSLSLQGAGAGVTLTSPNGDVLRYLVRLDFRATNNMAEYEGLLAGLRVAAGLGIRRLLV LGDSQLVVNQVCKEYRCSDPQMDAYVRQVRRMERHFDGIELRHVPRRDNMVADELSRLAS SRAQTPPGAFEERLTQSSARPDPLGETDAPDRPPRPVGVQASGPEESAPSSLRLIAWISE IQTYLTDKTLPEDREGSERVQRISKRYVLIEGTLYRRAANGILLKCIPQEQGVELLADIH EGECGAHSASRTLVGKAFRQGFYWPTALNDAVDLVRRCRACQFHAKQIHQPAQALQIIPL SWPFAVWGLDILGPFKRAPGGFEYLYVAIDKFTKWPEAYPVVKIDKHSALKFIKGITARF GVPNRIITDNGTQFTSELFGDYCEDMGIKLCFASPAHPRSNGQVERANAEILKGLKTKTF NILKKHGDSWIEELPAVLWANRTTPSRATGETPFFLVYGAEAVLPSELTLRSPRATMYCE ADQDQLRRDDLDYLEERRRRAALRAARYQQSLRRYHQRHVRARSLCVDDLVLRRVQTRAG LSKLSPMWEGPYRVIGVPRPGSVRLATGDGTELPNPWNIEHLRRFYP* '}}, 'OsNippo01g011650': {'msu': {'Genomic Sequence': ' >LOC_Os01g01270 ATGTCGTATTACGTAGATCCTCATACCAGCGTACCCCAATACCCTCTATATTCGGTCTAC GGGTATCCCCCATCGACAGTGGCGTGCCAGGTAGGGGGACTTGGTGCTCAAGGTTCTACT ACTATGACATCCAGCTTCGTCGACAACAGCGTCAACACCAACCTCAACCAAGGAGTTCCT ACTTCAACAATGCTGGTGTGGACTCAAGTCGGCGAAATCGTCTTCCCGGTTTACACCACG GTGTCGATCTCGGCTGGTCCATCAATGACCGGAAGCGAGAACACAGTGGCTACAACCCAG GATGACTCCATGTCGAAGGATCCTCCCGCCGAAGCGAAGAACGGAACGTCGATGACATCC GAGCCCGAGAAGGATCCTAGTACGTCCAAACCTTGTCTTTCCGACAAGAATCACAAGCCG ACGAGGATGATTTCCGAGGTGACAAGGTCCTGGTGTCCTATCCACAAAACCAGAAAACAC AACTTGCAAGCCTGCTGGGTTTTTCTCAACGTCCACGCAGAAATTCGTGCCTGCAAAGAG TGCGGAATTCAGCGTACTTCTCAAACTCGTGATGTATATTGTCCTATTCACAAGACAAAG AATCACGACCTCTCAGGCTGCAAGGTCTTTCTCAGCGCCATGAAGACGTCACCTCCTAAG GTCCAACAGTCACGCATCCCCCTCAGGGATGAGGACAAGGAACAAGGAGCGACGGTGATT TCAGATCGATTCGTTGGGGTAGTCGATATCTATCCTCACGAACCATCAGTCTTGCATCTG CTCGAAGACTATGGCTCATCGTCAACAAGTATGCCGCGCGAGGTATTGGCTATCGACGAG ACCGGCACGTCAGCGCGCGCTAATGTGGAAGCGGAGAATCAAGTGACTACACCGGCCCAG CACATCAGGGCCGTCAACGCAATACTGAGGGAAACCCCTTACGATCCCGTTCTGAACGAC GATCTCGCACGATGGACAGAACAGTTGCGGGAATCAGTGACCAACCTCAGCAACGCGTTC GAGGAGGCCGCTACTGCAGCGCACCCGGAACAGCCACCAACTGGCGGTGCTAATGGTGAA AACCCTAAACAGCGGGAATTGCCTCATCGAGCCACCCCTCCACCTCGCGGCATCAACGAT CTCCGCGATCACCTGAATGGCCGCCGAGAGGCGCGATGTGCACGAGACAACGAGAACAGT TTCCGACATCGCGTCTCTTCACGGCGTCACGATAACGAAGAACGAGGAGGCCGTTCGAGC GAAGACCGAGACCGTGATAACCGCCACAACCGCTACGATCACGACGATCGCGAACGGCGG GTGCTGGGCGATACTGGTCGAGGACGCCGCCATAACGACGACGACGACGGAGATCGGCGC CGAGACAACAACGGGAGACGACGACAGGATTCTCGAGAACCCGACCGACGTCCTCGTAAT CGTACACCGGAACCAAGTGACCCATCGTCATCGTCGTCATCTTCCTCATCCTCATCATCA GATAGGTATCCACGAAGGACGTACGACCGCCGACAACCCATCGCCCCCAGCGCTGGTTGA AGAGCTTTCAGTCGTTCACTGCGTGATGTCTGATGGCCTGAGAGATTTCGACCAGGAGCA ATAGAGAAGTACGATGGGAGTACCGACCCAGAAGAATTCCTTCAGGTTTACTCCATGGTA CTCTACGCTGCCGGAGCGGACGACAACGCGTTGGCGAATTACTTGCCAACCACATTGAAA GTCTCTGCGCGTTCATGGCTGATGCATCTTCCCCCCTACTCGATTTCTTCGTGGGCAGAC CTGTGGCAGCAGTTCATCGCCAACTTCCAAGGAACTTACAAGCGCCACGCGATCGAAGAC GACCTACATGCGTTGACACAGAATCCGGGTGAATCCTTGAGGGATTATGTTCGGCGCTTT AATGAGTGCAGAAATACGATCCCCGAAATCACCGATGCTTCTGTAATCCGCGCTTTCAAG TCCGGTGTCAGAGATCGCTATACTACCTAGGAGTTGGCAACGAGGCGCGTCACGACTACT CGGAGATTATTTGAAATTGTCGATCGTTGCGCTCATGCGGACGACGCACTGAGACGCAAG AACGACAAACCAAAGACCGGAGGAGAGAAGAAACCAGCCAAGGACGCACCCGAGTCAAGC AAGAAGAAAAATTGCAAGAGTGGGAAAAGGAAAGCTCAAGCGGAAGTTATCGCAACAGAA TACGCGGACCCTCCTAAGCGCCCTGACCCACAAGGCAGCGACGCGAAGAAAACATGGTGC CCTATACACAAGTCAGACAGACACTCTCTAGAAGATTGCCTCGTCTTCAAAAAGTCGCTC GCAAAACACATGCCATTGGAAAAAGGCAAGCGAGTACGCGTGGTCGAGAAGGACGCTGAG GCGGCTACTCAGGAATCGGGCTCAGCATACCCAGACTCTGATCTCCATGTCTCGCACATC TTCGGAGGTTCCACGACATACTCCTCAAAGCGAGAATACAAGAAAGTGGAACGTGAAGTC TGTTCGACGTGGCAGGGAGCTGCGCCCAAGATGAAGTGGTCTGAGCAGAAGATAGAATTC TCAGAAGAGGACCACCCCAAGACTGCTGTCATCCCAGGGCGATATCCGATCGTGGTCGAA CCCACTGTTCGGAATATCAAGGTCGCACGAGTTATGATCGACGACGGCAGCTCAATCAAC CTTCTCTTCGCTAGCACCTTGGACGCGATGGGGATCCCACGAAGCGAGTTGACACCCACC GATCAACCCTTCCATGGAATCACTACTCAGTCATCGTCCAAACCATTGGGCAAAATTACG TTGCTTGTGACTTTCGGCCAAGCAAATAACTTCCGAACGGAGCAGATCACCTTTGATGTC GCTGAATTCGATACAGCATACAATGCTATCATTGGGAGAACTGCACTCGCGAAGTTCGTG GCCGCATCTAACTACGTGTATCAAGTGCTCAAGATGCCGGGACCGAAGGGAACAATCACT ATTCAAGGGAATTCTAAGCTGGCAGTGCAATGCGACAAGCGGAGCCTCGACATGGTCGAG CACACGCCCAGCCCACCCGCCACAGCTGAGCCACCCAAGAAAGTGAGCAAAACAAACAAG ACGCCGAAACCGGACGGTGCAATCAAGATCGTTCCACTCTCTAGTGCCAACCCCGACAAG ACAGTCAAAATCGGGGCATCACTAGGCGGGAAATAGGAACTCGCGCTCATCACCTTCCTC CGCGAAAATGCTAACGTGTTCGCTTGGCGGCCGTCCGACATGCCGGGGGTACCCAGGGAG GTGATTGATCACAAAATCATGGTGCGACCCAACGCCAAACCAGTAAAGTAAAAACTGCGG AGATTTACACCAGATCGAAAACAAGCCATACGAGAAGAGCTCGACAAGCTTCTCAAAGCT GGTTTCATCAGAGAGGTACTCCATCCAGAGTGGCTAGCCAACCCAGTCATGGTGCGGAAG GCCAACGGGAAATGGAGAATGTGTGTCGATTTCACCGACCTCAACAAGGCGTGTCCCAAG GATCACTTCCCTCTTCCTCGAATAGACCAACTGGTGGACTCAACAGCCGGTTGTGAGTTG TTGAGCTTTCTCGACGCTTACTCCGGCTACCACCAAATCAACATGGCGAAAGAGGACGAG GAGAAGACAGCATTCTTCACGCCGTTCGGGGTATTCTGCTACGTTAAGATGCCGATCGGA CTAATAACCGCAGGAAACACTTTCCAACGCACGGTCTAGGGCGCACTTAGCGGCCAACTC GGAAACAATGTCGAGGCCTACGTCGACAACATTGTTGTTAAGACCAAGACAAGCGACTCA TTGATTGACAGTCTGCGGGAAACGTTCGACAACCTCCGACGATATCGCCTCATGCTCAAT CCAGAGAAGTGCACGTTCGGAGTACCATCGGGAAAGCTGCTTGGTTTCCTCGTCTCTAGC AGAGGAATAGAAGCAAATCCCGAGAAGATCAACGCAATCGAAAACATAAAGTCGCCTACA AGACTCAAGGAAGTACAGAAGCTAACCAGATGCATGGCGGCACTAAGCAGGTTCGTCACT AGGATGGGAGAGCGAGGACAACCCTTCTTCACTCTGCTGAAGAAGCAAGACAAATTTGTA TGGACACAGGAAGCCGAAGAGGCATTCATTGCACTCAAGCGCTACCTATCAAATCCACCT GTACTTGTTGCCCCCCAACCTAATGAAGAATTATTTCTCTATATTGCCGCCACGCCATAT TCCGTTAGCACTGTCATTGTTGTCGAGAGAGAGAAAGTGCAACGACCAGTCTACTACGTA GACAAGATATCCACAGATCCAAAAACTGCTCTACGTGGTAATCATGACATCAAGAAAGCT ACGCCACTACTTCCAAGCCCACAGGGTCAAAGTTGTATCCTCCTTCCCTCTCGGTGAAGT AGTGAGAAACAAAGACGTTGTCGGCCGCATTGCGAAATGGGTAGTCGAGCTAAGCCAATT TAATGTCCGCTTTGTGCCACGAACAACCATCAAGTCCCAGGTACTTGCCGACTTCGTAGC CGATTGGACTATGACTGATAACAGGTCAGGCAACCAAATTGACAACGAAACGTGGACAAT GGTGTTCGACGGCGCACTCAACAGCCAAGGAGCAGGGGCATGA ', 'CDS': ' >LOC_Os01g01270.1 ATGTCGTATTACGTAGATCCTCATACCAGCGTACCCCAATACCCTCTATATTCGGTCTAC GGGTATCCCCCATCGACAGTGGCGTGCCAGGTAGGGGGACTTGGTGCTCAAGGTTCTACT ACTATGACATCCAGCTTCGTCGACAACAGCGTCAACACCAACCTCAACCAAGGAGTTCCT ACTTCAACAATGCTGGTGTGGACTCAAGTCGGCGAAATCGTCTTCCCGGTTTACACCACG GTGTCGATCTCGGCTGGTCCATCAATGACCGGAAGCGAGAACACAGTGGCTACAACCCAG GATGACTCCATGTCGAAGGATCCTCCCGCCGAAGCGAAGAACGGAACGTCGATGACATCC GAGCCCGAGAAGGATCCTAGTACGTCCAAACCTTGTCTTTCCGACAAGAATCACAAGCCG ACGAGGATGATTTCCGAGGTGACAAGGTCCTGGTGTCCTATCCACAAAACCAGAAAACAC AACTTGCAAGCCTGCTGGGTTTTTCTCAACGTCCACGCAGAAATTCGTGCCTGCAAAGAG TGCGGAATTCAGCGTACTTCTCAAACTCGTGATGTATATTGTCCTATTCACAAGACAAAG AATCACGACCTCTCAGGCTGCAAGGTCTTTCTCAGCGCCATGAAGACGTCACCTCCTAAG GTCCAACAGTCACGCATCCCCCTCAGGGATGAGGACAAGGAACAAGGAGCGACGGTGATT TCAGATCGATTCGTTGGGGTAGTCGATATCTATCCTCACGAACCATCAGTCTTGCATCTG CTCGAAGACTATGGCTCATCGTCAACAAGTATGCCGCGCGAGGTATTGGCTATCGACGAG ACCGGCACGTCAGCGCGCGCTAATGTGGAAGCGGAGAATCAAGTGACTACACCGGCCCAG CACATCAGGGCCGTCAACGCAATACTGAGGGAAACCCCTTACGATCCCGTTCTGAACGAC GATCTCGCACGATGGACAGAACAGTTGCGGGAATCAGTGACCAACCTCAGCAACGCGTTC GAGGAGGCCGCTACTGCAGCGCACCCGGAACAGCCACCAACTGGCGGTGCTAATGGTGAA AACCCTAAACAGCGGGAATTGCCTCATCGAGCCACCCCTCCACCTCGCGGCATCAACGAT CTCCGCGATCACCTGAATGGCCGCCGAGAGGCGCGATGTGCACGAGACAACGAGAACAGT TTCCGACATCGCGTCTCTTCACGGCGTCACGATAACGAAGAACGAGGAGGCCGTTCGAGC GAAGACCGAGACCGTGATAACCGCCACAACCGCTACGATCACGACGATCGCGAACGGCGG GTGCTGGGCGATACTGGTCGAGGACGCCGCCATAACGACGACGACGACGGAGATCGGCGC CGAGACAACAACGGGAGACGACGACAGGATTCTCGAGAACCCGACCGACGTCCTCGTAAT CGTACACCGGAACCAAGTGACCCATCGTCATCGTCGTCATCTTCCTCATCCTCATCATCA GATAGATTTCGACCAGGAGCAATAGAGAAGTACGATGGGAGTACCGACCCAGAAGAATTC CTTCAGGTTTACTCCATGGTACTCTACGCTGCCGGAGCGGACGACAACGCGTTGGCGAAT TACTTGCCAACCACATTGAAAGTCTCTGCGCGTTCATGGCTGATGCATCTTCCCCCCTAC TCGATTTCTTCGTGGGCAGACCTGTGGCAGCAGTTCATCGCCAACTTCCAAGGAACTTAC AAGCGCCACGCGATCGAAGACGACCTACATGCGTTGACACAGAATCCGGGTGAATCCTTG AGGGATTATGTTCGGCGCTTTAATGAGTGCAGAAATACGATCCCCGAAATCACCGATGCT TCTGTAATCCGCGCTTTCAAGTCCGGTAACGACAAACCAAAGACCGGAGGAGAGAAGAAA CCAGCCAAGGACGCACCCGAGTCAAGCAAGAAGAAAAATTGCAAGAGTGGGAAAAGGAAA GCTCAAGCGGAAGTTATCGCAACAGAATACGCGGACCCTCCTAAGCGCCCTGACCCACAA GGCAGCGACGCGAAGAAAACATGGTGCCCTATACACAAGTCAGACAGACACTCTCTAGAA GATTGCCTCGTCTTCAAAAAGTCGCTCGCAAAACACATGCCATTGGAAAAAGGCAAGCGA GTACGCGTGGTCGAGAAGGACGCTGAGGCGGCTACTCAGGAATCGGGCTCAGCATACCCA GACTCTGATCTCCATGTCTCGCACATCTTCGGAGGTTCCACGACATACTCCTCAAAGCGA GAATACAAGAAAGTGGAACGTGAAGTCTGTTCGACGTGGCAGGGAGCTGCGCCCAAGATG AAGTGGTCTGAGCAGAAGATAGAATTCTCAGAAGAGGACCACCCCAAGACTGCTGTCATC CCAGGGCGATATCCGATCGTGGTCGAACCCACTGTTCGGAATATCAAGGTCGCACGAGTT ATGATCGACGACGGCAGCTCAATCAACCTTCTCTTCGCTAGCACCTTGGACGCGATGGGG ATCCCACGAAGCGAGTTGACACCCACCGATCAACCCTTCCATGGAATCACTACTCAGTCA TCGTCCAAACCATTGGGCAAAATTACGTTGCTTGTGACTTTCGGCCAAGCAAATAACTTC CGAACGGAGCAGATCACCTTTGATGTCGCTGAATTCGATACAGCATACAATGCTATCATT GGGAGAACTGCACTCGCGAAGTTCGTGGCCGCATCTAACTACGTGTATCAAGTGCTCAAG ATGCCGGGACCGAAGGGAACAATCACTATTCAAGGGAATTCTAAGCTGGCAGTGCAATGC GACAAGCGGAGCCTCGACATGGTCGAGCACACGCCCAGCCCACCCGCCACAGCTGAGCCA CCCAAGAAAGTGAGCAAAACAAACAAGACGCCGAAACCGGACGATCGAAAACAAGCCATA CGAGAAGAGCTCGACAAGCTTCTCAAAGCTGGTTTCATCAGAGAGGTACTCCATCCAGAG TGGCTAGCCAACCCAGTCATGGTGCGGAAGGCCAACGGGAAATGGAGAATGTGTGTCGAT TTCACCGACCTCAACAAGGCGTGTCCCAAGGATCACTTCCCTCTTCCTCGAATAGACCAA CTGGTGGACTCAACAGCCGGTTGTGAGTTGTTGAGCTTTCTCGACGCTTACTCCGGCTAC CACCAAATCAACATGGCGAAAGAGGACGAGGAGAAGACAGCATTCTTCACGCCGTTCGGG GGCGCACTTAGCGGCCAACTCGGAAACAATGTCGAGGCCTACGTCGACAACATTGTTGTT AAGACCAAGACAAGCGACTCATTGATTGACAGTCTGCGGGAAACGTTCGACAACCTCCGA CGATATCGCCTCATGCTCAATCCAGAGAAGTGCACGTTCGGAGTACCATCGGGAAAGCTG CTTGGTTTCCTCGTCTCTAGCAGAGGAATAGAAGCAAATCCCGAGAAGATCAACGCAATC GAAAACATAAAGTCGCCTACAAGACTCAAGGAAGTACAGAAGCTAACCAGATGCATGGCG GCACTAAGCAGAAAGCTACGCCACTACTTCCAAGCCCACAGGGTCAAAGTTGTATCCTCC TTCCCTCTCGGTGAAGTAGTGAGAAACAAAGACGTTGTCGGCCGCATTGCGAAATGGGTA GTCGAGCTAAGCCAATTTAATGTCCGCTTTGTGCCACGAACAACCATCAAGTCCCAGGTA CTTGCCGACTTCGTAGCCGATTGGACTATGACTGATAACAGGTCAGGCAACCAAATTGAC AACGAAACGTGGACAATGGTGTTCGACGGCGCACTCAACAGCCAAGGAGCAGGGGCATGA ', 'Protein': ' >LOC_Os01g01270.1 MSYYVDPHTSVPQYPLYSVYGYPPSTVACQVGGLGAQGSTTMTSSFVDNSVNTNLNQGVP TSTMLVWTQVGEIVFPVYTTVSISAGPSMTGSENTVATTQDDSMSKDPPAEAKNGTSMTS EPEKDPSTSKPCLSDKNHKPTRMISEVTRSWCPIHKTRKHNLQACWVFLNVHAEIRACKE CGIQRTSQTRDVYCPIHKTKNHDLSGCKVFLSAMKTSPPKVQQSRIPLRDEDKEQGATVI SDRFVGVVDIYPHEPSVLHLLEDYGSSSTSMPREVLAIDETGTSARANVEAENQVTTPAQ HIRAVNAILRETPYDPVLNDDLARWTEQLRESVTNLSNAFEEAATAAHPEQPPTGGANGE NPKQRELPHRATPPPRGINDLRDHLNGRREARCARDNENSFRHRVSSRRHDNEERGGRSS EDRDRDNRHNRYDHDDRERRVLGDTGRGRRHNDDDDGDRRRDNNGRRRQDSREPDRRPRN RTPEPSDPSSSSSSSSSSSSDRFRPGAIEKYDGSTDPEEFLQVYSMVLYAAGADDNALAN YLPTTLKVSARSWLMHLPPYSISSWADLWQQFIANFQGTYKRHAIEDDLHALTQNPGESL RDYVRRFNECRNTIPEITDASVIRAFKSGNDKPKTGGEKKPAKDAPESSKKKNCKSGKRK AQAEVIATEYADPPKRPDPQGSDAKKTWCPIHKSDRHSLEDCLVFKKSLAKHMPLEKGKR VRVVEKDAEAATQESGSAYPDSDLHVSHIFGGSTTYSSKREYKKVEREVCSTWQGAAPKM KWSEQKIEFSEEDHPKTAVIPGRYPIVVEPTVRNIKVARVMIDDGSSINLLFASTLDAMG IPRSELTPTDQPFHGITTQSSSKPLGKITLLVTFGQANNFRTEQITFDVAEFDTAYNAII GRTALAKFVAASNYVYQVLKMPGPKGTITIQGNSKLAVQCDKRSLDMVEHTPSPPATAEP PKKVSKTNKTPKPDDRKQAIREELDKLLKAGFIREVLHPEWLANPVMVRKANGKWRMCVD FTDLNKACPKDHFPLPRIDQLVDSTAGCELLSFLDAYSGYHQINMAKEDEEKTAFFTPFG GALSGQLGNNVEAYVDNIVVKTKTSDSLIDSLRETFDNLRRYRLMLNPEKCTFGVPSGKL LGFLVSSRGIEANPEKINAIENIKSPTRLKEVQKLTRCMAALSRKLRHYFQAHRVKVVSS FPLGEVVRNKDVVGRIAKWVVELSQFNVRFVPRTTIKSQVLADFVADWTMTDNRSGNQID NETWTMVFDGALNSQGAGA* '}}, 'OsNippo01g011400': {}}\n"
     ]
    }
   ],
   "source": [
    "# Query with chromosome\n",
    "query = MultiQuery()\n",
    "result = query.query_by_chromosome(chro=\"chr01\", start_pos=\"100000\",\n",
    "                     end_pos=\"150000\", number_process = 2, multi_processing=True, multi_threading=False,\n",
    "                     dbs='all')\n",
    "query.save(result, save_path=\"./result/\", format=[\"csv\", \"html\", \"json\", \"pkl\"], hyper_link=False)\n",
    "print(\"Output database:\", result)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 8,
   "metadata": {},
   "outputs": [],
   "source": [
    "data = pd.read_pickle(\"./result/data/db.pkl\")\n",
    "data = data.astype(str)\n",
    "sql = \"SELECT * FROM data WHERE `oryzabase.CGSNL Gene Symbol` = 'TLP27' or `gramene.system_name` = 'oryza_sativa'\"\n",
    "pysqldf = lambda q: sqldf(q, globals())\n",
    "r = pysqldf(sql)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 9,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/html": [
       "<div>\n",
       "<style scoped>\n",
       "    .dataframe tbody tr th:only-of-type {\n",
       "        vertical-align: middle;\n",
       "    }\n",
       "\n",
       "    .dataframe tbody tr th {\n",
       "        vertical-align: top;\n",
       "    }\n",
       "\n",
       "    .dataframe thead th {\n",
       "        text-align: right;\n",
       "    }\n",
       "</style>\n",
       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>iric_name</th>\n",
       "      <th>oryzabase.Trait Gene Id</th>\n",
       "      <th>oryzabase.CGSNL Gene Symbol</th>\n",
       "      <th>oryzabase.Gene symbol synonym(s)</th>\n",
       "      <th>oryzabase.CGSNL Gene Name</th>\n",
       "      <th>oryzabase.Gene name synonym(s)</th>\n",
       "      <th>oryzabase.Protein Name</th>\n",
       "      <th>oryzabase.Explanation</th>\n",
       "      <th>oryzabase.Trait Class</th>\n",
       "      <th>oryzabase.RAP ID</th>\n",
       "      <th>...</th>\n",
       "      <th>gwas_atlas.Species</th>\n",
       "      <th>gwas_atlas.Position</th>\n",
       "      <th>gwas_atlas.P-values</th>\n",
       "      <th>gwas_atlas.R2(%)</th>\n",
       "      <th>gwas_atlas.Mapped Gene(s)</th>\n",
       "      <th>gwas_atlas.Consequence Type(s)</th>\n",
       "      <th>gwas_atlas.PMID</th>\n",
       "      <th>oryzabase.Allele</th>\n",
       "      <th>rapdb.GO</th>\n",
       "      <th>rapdb.InterPro</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>0</th>\n",
       "      <td>OsNippo01g011700</td>\n",
       "      <td>22606</td>\n",
       "      <td>TLP27</td>\n",
       "      <td>OsTLP27</td>\n",
       "      <td>THYLAKOID LUMENAL PROTEIN 27</td>\n",
       "      <td>Thylakoid lumenal protein 27</td>\n",
       "      <td>THYLAKOID LUMENAL PROTEIN 27</td>\n",
       "      <td>AtTLP homolog. TO:0020116: photochemical quenc...</td>\n",
       "      <td>Coloration - Chlorophyll</td>\n",
       "      <td>Os01g0102300</td>\n",
       "      <td>...</td>\n",
       "      <td>['Rice']</td>\n",
       "      <td>['chr1:129845']</td>\n",
       "      <td>[7.7e-07]</td>\n",
       "      <td>[18.1]</td>\n",
       "      <td>['Os01g0102300 ']</td>\n",
       "      <td>['upstream_gene_variant ']</td>\n",
       "      <td>[29081789]</td>\n",
       "      <td>nan</td>\n",
       "      <td>nan</td>\n",
       "      <td>nan</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>1</th>\n",
       "      <td>OsNippo01g011750</td>\n",
       "      <td>20924</td>\n",
       "      <td>HAP5H</td>\n",
       "      <td>OsHAP5H, OsNF-YC9, NF-YC9, NFYC9</td>\n",
       "      <td>HAP5H SUBUNIT OF CCAAT-BOX BINDING COMPLEX</td>\n",
       "      <td>NUCLEAR FACTOR-Y subunit C9, NUCLEAR FACTOR-Y ...</td>\n",
       "      <td>HAP5H SUBUNIT OF CCAAT-BOX BINDING COMPLEX</td>\n",
       "      <td>LOC_Os01g01290.</td>\n",
       "      <td>Other</td>\n",
       "      <td>Os01g0102400</td>\n",
       "      <td>...</td>\n",
       "      <td>['Rice']</td>\n",
       "      <td>['chr1:143282']</td>\n",
       "      <td>[2.4e-05]</td>\n",
       "      <td>[\"'-\"]</td>\n",
       "      <td>['Os01g0102700 Os01g0102600 Os01g0102500 Os01g...</td>\n",
       "      <td>['upstream_gene_variant upstream_gene_variant ...</td>\n",
       "      <td>[29767744]</td>\n",
       "      <td>Oshap5h</td>\n",
       "      <td>Cellular Component: intracellular (GO:0005622)...</td>\n",
       "      <td>Transcription factor CBF/NF-Y/archaeal histone...</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>2</th>\n",
       "      <td>OsNippo01g011800</td>\n",
       "      <td>nan</td>\n",
       "      <td>nan</td>\n",
       "      <td>nan</td>\n",
       "      <td>nan</td>\n",
       "      <td>nan</td>\n",
       "      <td>nan</td>\n",
       "      <td>nan</td>\n",
       "      <td>nan</td>\n",
       "      <td>nan</td>\n",
       "      <td>...</td>\n",
       "      <td>['Rice']</td>\n",
       "      <td>['chr1:143282']</td>\n",
       "      <td>[2.4e-05]</td>\n",
       "      <td>[\"'-\"]</td>\n",
       "      <td>['Os01g0102700 Os01g0102600 Os01g0102500 Os01g...</td>\n",
       "      <td>['upstream_gene_variant upstream_gene_variant ...</td>\n",
       "      <td>[29767744]</td>\n",
       "      <td>nan</td>\n",
       "      <td>nan</td>\n",
       "      <td>nan</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>3</th>\n",
       "      <td>OsNippo01g011850</td>\n",
       "      <td>11366</td>\n",
       "      <td>nan</td>\n",
       "      <td>OsSK4, OsSKL1</td>\n",
       "      <td>nan</td>\n",
       "      <td>Shikimate kinase 4</td>\n",
       "      <td>nan</td>\n",
       "      <td>nan</td>\n",
       "      <td>Biochemical character</td>\n",
       "      <td>Os01g0102600</td>\n",
       "      <td>...</td>\n",
       "      <td>['Rice']</td>\n",
       "      <td>['chr1:143282']</td>\n",
       "      <td>[2.4e-05]</td>\n",
       "      <td>[\"'-\"]</td>\n",
       "      <td>['Os01g0102700 Os01g0102600 Os01g0102500 Os01g...</td>\n",
       "      <td>['upstream_gene_variant upstream_gene_variant ...</td>\n",
       "      <td>[29767744]</td>\n",
       "      <td>nan</td>\n",
       "      <td>Molecular Function: shikimate kinase activity ...</td>\n",
       "      <td>Shikimate kinase (IPR000623)</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>4</th>\n",
       "      <td>OsNippo01g011900</td>\n",
       "      <td>nan</td>\n",
       "      <td>nan</td>\n",
       "      <td>nan</td>\n",
       "      <td>nan</td>\n",
       "      <td>nan</td>\n",
       "      <td>nan</td>\n",
       "      <td>nan</td>\n",
       "      <td>nan</td>\n",
       "      <td>nan</td>\n",
       "      <td>...</td>\n",
       "      <td>['Rice']</td>\n",
       "      <td>['chr1:143282']</td>\n",
       "      <td>[2.4e-05]</td>\n",
       "      <td>[\"'-\"]</td>\n",
       "      <td>['Os01g0102700 Os01g0102600 Os01g0102500 Os01g...</td>\n",
       "      <td>['upstream_gene_variant upstream_gene_variant ...</td>\n",
       "      <td>[29767744]</td>\n",
       "      <td>nan</td>\n",
       "      <td>Cellular Component: endoplasmic reticulum (GO:...</td>\n",
       "      <td>Translocon-associated beta (IPR008856)</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "<p>5 rows × 145 columns</p>\n",
       "</div>"
      ],
      "text/plain": [
       "          iric_name oryzabase.Trait Gene Id oryzabase.CGSNL Gene Symbol  \\\n",
       "0  OsNippo01g011700                   22606                       TLP27   \n",
       "1  OsNippo01g011750                   20924                       HAP5H   \n",
       "2  OsNippo01g011800                     nan                         nan   \n",
       "3  OsNippo01g011850                   11366                         nan   \n",
       "4  OsNippo01g011900                     nan                         nan   \n",
       "\n",
       "   oryzabase.Gene symbol synonym(s)  \\\n",
       "0                           OsTLP27   \n",
       "1  OsHAP5H, OsNF-YC9, NF-YC9, NFYC9   \n",
       "2                               nan   \n",
       "3                     OsSK4, OsSKL1   \n",
       "4                               nan   \n",
       "\n",
       "                    oryzabase.CGSNL Gene Name  \\\n",
       "0                THYLAKOID LUMENAL PROTEIN 27   \n",
       "1  HAP5H SUBUNIT OF CCAAT-BOX BINDING COMPLEX   \n",
       "2                                         nan   \n",
       "3                                         nan   \n",
       "4                                         nan   \n",
       "\n",
       "                      oryzabase.Gene name synonym(s)  \\\n",
       "0                       Thylakoid lumenal protein 27   \n",
       "1  NUCLEAR FACTOR-Y subunit C9, NUCLEAR FACTOR-Y ...   \n",
       "2                                                nan   \n",
       "3                                 Shikimate kinase 4   \n",
       "4                                                nan   \n",
       "\n",
       "                       oryzabase.Protein Name  \\\n",
       "0                THYLAKOID LUMENAL PROTEIN 27   \n",
       "1  HAP5H SUBUNIT OF CCAAT-BOX BINDING COMPLEX   \n",
       "2                                         nan   \n",
       "3                                         nan   \n",
       "4                                         nan   \n",
       "\n",
       "                               oryzabase.Explanation  \\\n",
       "0  AtTLP homolog. TO:0020116: photochemical quenc...   \n",
       "1                                    LOC_Os01g01290.   \n",
       "2                                                nan   \n",
       "3                                                nan   \n",
       "4                                                nan   \n",
       "\n",
       "       oryzabase.Trait Class oryzabase.RAP ID  \\\n",
       "0   Coloration - Chlorophyll     Os01g0102300   \n",
       "1                      Other     Os01g0102400   \n",
       "2                        nan              nan   \n",
       "3      Biochemical character     Os01g0102600   \n",
       "4                        nan              nan   \n",
       "\n",
       "                         ...                         gwas_atlas.Species  \\\n",
       "0                        ...                                   ['Rice']   \n",
       "1                        ...                                   ['Rice']   \n",
       "2                        ...                                   ['Rice']   \n",
       "3                        ...                                   ['Rice']   \n",
       "4                        ...                                   ['Rice']   \n",
       "\n",
       "  gwas_atlas.Position gwas_atlas.P-values gwas_atlas.R2(%)  \\\n",
       "0     ['chr1:129845']           [7.7e-07]           [18.1]   \n",
       "1     ['chr1:143282']           [2.4e-05]           [\"'-\"]   \n",
       "2     ['chr1:143282']           [2.4e-05]           [\"'-\"]   \n",
       "3     ['chr1:143282']           [2.4e-05]           [\"'-\"]   \n",
       "4     ['chr1:143282']           [2.4e-05]           [\"'-\"]   \n",
       "\n",
       "                           gwas_atlas.Mapped Gene(s)  \\\n",
       "0                                  ['Os01g0102300 ']   \n",
       "1  ['Os01g0102700 Os01g0102600 Os01g0102500 Os01g...   \n",
       "2  ['Os01g0102700 Os01g0102600 Os01g0102500 Os01g...   \n",
       "3  ['Os01g0102700 Os01g0102600 Os01g0102500 Os01g...   \n",
       "4  ['Os01g0102700 Os01g0102600 Os01g0102500 Os01g...   \n",
       "\n",
       "                      gwas_atlas.Consequence Type(s) gwas_atlas.PMID  \\\n",
       "0                         ['upstream_gene_variant ']      [29081789]   \n",
       "1  ['upstream_gene_variant upstream_gene_variant ...      [29767744]   \n",
       "2  ['upstream_gene_variant upstream_gene_variant ...      [29767744]   \n",
       "3  ['upstream_gene_variant upstream_gene_variant ...      [29767744]   \n",
       "4  ['upstream_gene_variant upstream_gene_variant ...      [29767744]   \n",
       "\n",
       "  oryzabase.Allele                                           rapdb.GO  \\\n",
       "0              nan                                                nan   \n",
       "1          Oshap5h  Cellular Component: intracellular (GO:0005622)...   \n",
       "2              nan                                                nan   \n",
       "3              nan  Molecular Function: shikimate kinase activity ...   \n",
       "4              nan  Cellular Component: endoplasmic reticulum (GO:...   \n",
       "\n",
       "                                      rapdb.InterPro  \n",
       "0                                                nan  \n",
       "1  Transcription factor CBF/NF-Y/archaeal histone...  \n",
       "2                                                nan  \n",
       "3                       Shikimate kinase (IPR000623)  \n",
       "4             Translocon-associated beta (IPR008856)  \n",
       "\n",
       "[5 rows x 145 columns]"
      ]
     },
     "execution_count": 9,
     "metadata": {},
     "output_type": "execute_result"
    }
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    "r"
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  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": []
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