Merge pull request #55 from TUW-GEO/dev

store conda env in current dir

Author: MartinSchobben

Diff for: Makefile

@@ -11,7 +11,8 @@ QN != git diff --cached --name-only "***.ipynb"
 CONDA_ENV != conda info --base
 CONDA_ACTIVATE := source $(CONDA_ENV)/etc/profile.d/conda.sh ; \
 	conda activate ; conda activate
-CONDA_ENV_DIR := $(foreach i,$(REQ),$(CONDA_ENV)/envs/$(i))
+PREFIX = $(CURDIR)/.conda_envs
+CONDA_ENV_DIR := $(foreach i,$(REQ),$(PREFIX)/$(i))
 KERNEL_DIR != $(CONDA_ACTIVATE) eo-datascience; jupyter --data-dir
 KERNEL_DIR := $(foreach i,$(REQ),$(KERNEL_DIR)/kernels/$(i))
 
@@ -23,6 +24,7 @@ help:
 	@echo "  make kernel       - Create Conda environments and Jupyter kernels"
 	@echo "  make post-render  - Post-render Quarto book"
 	@echo "  make preview      - Preview Jupyter Book"
+	@echo "  make convert      - Convert Jupyter notebooks to Quarto notebooks"
 	@echo "  "
 	@echo "  make teardown     - Remove Conda environments and Jupyter kernels"
 	@echo "  make clean        - Removes ipynb_checkpoints and quarto \
@@ -34,16 +36,18 @@ $(CONDA_ENV)/envs/eo-datascience:
 	conda env create --file environment.yml
 
 $(CONDA_ENV_DIR):
-	$(foreach f, $(YML), conda env create --file $(f); )
+	$(foreach f, $(YML), \
+		conda env create --file $(f) \
+			--prefix $(PREFIX)/$(basename $(notdir $(f))); )
 
 environment: $(CONDA_ENV_DIR)
 	@echo -e "conda environments are ready."
 
 $(KERNEL_DIR):
 	$(foreach f, $(REQ), \
-		$(CONDA_ACTIVATE) $(f); \
+		$(CONDA_ACTIVATE) $(PREFIX)/$(f); \
 		python -m ipykernel install --user --name $(f) --display-name $(f); \
-		conda deactivate; )
+			conda deactivate; )
 
 kernel: $(CONDA_ENV)/envs/eo-datascience $(CONDA_ENV_DIR) $(KERNEL_DIR)
 	@echo -e "jupyter kernels are ready."
@@ -60,7 +64,7 @@ convert:
 		mv $(subst .ipynb,.qmd, $(f)) $(subst notebooks,chapters,$(subst .ipynb,.qmd,$(f))); )
 
 preview: $(CONDA_ENV)/envs/eo-datascience $(CONDA_ENV_DIR) $(KERNEL_DIR)
-	$(CONDA_ACTIVATE) eo-datascience
+	$(CONDA_ACTIVATE) $(PREFIX)/eo-datascience
 	- mkdir -p _preview/notebooks
 	python -m pip install .
 	cp ./chapters/references.bib ./_preview/notebooks/
@@ -79,10 +83,10 @@ clean:
 		./**/**/.jupyter_cache
 
 teardown:
-	conda remove -n eo-datascience --all -y
+	conda remove -n $(PREFIX)/eo-datascience --all -y
 	$(foreach f, $(REQ), \
-		$(CONDA_ACTIVATE) $(f); \
+		$(CONDA_ACTIVATE) $(PREFIX)/$(f); \
 		jupyter kernelspec uninstall -y $(f); \
 		conda deactivate; \
-		conda remove -n $(f) --all -y ; \
+		conda remove --prefix $(PREFIX)/$(f) --all -y ; \
 		conda deactivate; )