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Loadind faillure #154

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fdekerme opened this issue Jan 23, 2025 · 1 comment
Open

Loadind faillure #154

fdekerme opened this issue Jan 23, 2025 · 1 comment

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@fdekerme
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Hello,
In Julia 1.11.2 and 1.11.3, I can't use Tidier because of an error with DuckDB.jl:

julia> using Tidier
Precompiling Tidier...
Info Given Tidier was explicitly requested, output will be shown live
ERROR: LoadError: could not load symbol "duckdb_vector_size":
The specified procedure could not be found.
Stacktrace:
 [1] duckdb_vector_size()
   @ DuckDB C:\Users\franc\.julia\packages\DuckDB\8Gvy6\src\api.jl:715
 [2] top-level scope
   @ C:\Users\franc\.julia\packages\DuckDB\8Gvy6\src\database.jl:100
 [3] include(mod::Module, _path::String)
   @ Base .\Base.jl:557
 [4] include(x::String)
   @ DuckDB C:\Users\franc\.julia\packages\DuckDB\8Gvy6\src\DuckDB.jl:1
 [5] top-level scope
   @ C:\Users\franc\.julia\packages\DuckDB\8Gvy6\src\DuckDB.jl:28
 [6] include
   @ .\Base.jl:557 [inlined]
 [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
   @ Base .\loading.jl:2881
 [8] top-level scope
   @ stdin:6
in expression starting at C:\Users\franc\.julia\packages\DuckDB\8Gvy6\src\database.jl:100
in expression starting at C:\Users\franc\.julia\packages\DuckDB\8Gvy6\src\DuckDB.jl:1
in expression starting at stdin:6
ERROR: LoadError: Failed to precompile DuckDB [d2f5444f-75bc-4fdf-ac35-56f514c445e1] to "C:\\Users\\franc\\.julia\\compiled\\v1.11\\DuckDB\\jl_EB27.tmp".
Stacktrace:
  [1] error(s::String)
    @ Base .\error.jl:35
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
    @ Base .\loading.jl:3174
  [3] (::Base.var"#1110#1111"{Base.PkgId})()
    @ Base .\loading.jl:2579
  [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile C:\Users\franc\.julia\juliaup\julia-1.11.3+0.x64.w64.mingw32\share\julia\stdlib\v1.11\FileWatching\src\pidfile.jl:95
  [5] #mkpidlock#6
    @ C:\Users\franc\.julia\juliaup\julia-1.11.3+0.x64.w64.mingw32\share\julia\stdlib\v1.11\FileWatching\src\pidfile.jl:90 [inlined]
  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile C:\Users\franc\.julia\juliaup\julia-1.11.3+0.x64.w64.mingw32\share\julia\stdlib\v1.11\FileWatching\src\pidfile.jl:116
  [7] #invokelatest#2
    @ .\essentials.jl:1057 [inlined]
  [8] invokelatest
    @ .\essentials.jl:1052 [inlined]
  [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base .\loading.jl:3698
 [10] maybe_cachefile_lock
    @ .\loading.jl:3695 [inlined]
 [11] _require(pkg::Base.PkgId, env::String)
    @ Base .\loading.jl:2565
 [12] __require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base .\loading.jl:2388
 [13] #invoke_in_world#3
    @ .\essentials.jl:1089 [inlined]
 [14] invoke_in_world
    @ .\essentials.jl:1086 [inlined]
 [15] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base .\loading.jl:2375
 [16] macro expansion
    @ .\loading.jl:2314 [inlined]
 [17] macro expansion
    @ .\lock.jl:273 [inlined]
 [18] __require(into::Module, mod::Symbol)
    @ Base .\loading.jl:2271
 [19] #invoke_in_world#3
    @ .\essentials.jl:1089 [inlined]
 [20] invoke_in_world
    @ .\essentials.jl:1086 [inlined]
 [21] require(into::Module, mod::Symbol)
    @ Base .\loading.jl:2260
 [22] include
    @ .\Base.jl:557 [inlined]
 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
    @ Base .\loading.jl:2881
 [24] top-level scope
    @ stdin:6
in expression starting at C:\Users\franc\.julia\packages\TidierDB\J2fSt\src\TidierDB.jl:1
in expression starting at stdin:6
ERROR: LoadError: Failed to precompile TidierDB [86993f9b-bbba-4084-97c5-ee15961ad48b] to "C:\\Users\\franc\\.julia\\compiled\\v1.11\\TidierDB\\jl_E74F.tmp".
Stacktrace:
  [1] error(s::String)
    @ Base .\error.jl:35
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
    @ Base .\loading.jl:3174
  [3] (::Base.var"#1110#1111"{Base.PkgId})()
    @ Base .\loading.jl:2579
  [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile C:\Users\franc\.julia\juliaup\julia-1.11.3+0.x64.w64.mingw32\share\julia\stdlib\v1.11\FileWatching\src\pidfile.jl:95
  [5] #mkpidlock#6
    @ C:\Users\franc\.julia\juliaup\julia-1.11.3+0.x64.w64.mingw32\share\julia\stdlib\v1.11\FileWatching\src\pidfile.jl:90 [inlined]
  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile C:\Users\franc\.julia\juliaup\julia-1.11.3+0.x64.w64.mingw32\share\julia\stdlib\v1.11\FileWatching\src\pidfile.jl:116
  [7] #invokelatest#2
    @ .\essentials.jl:1057 [inlined]
  [8] invokelatest
    @ .\essentials.jl:1052 [inlined]
  [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base .\loading.jl:3698
 [10] maybe_cachefile_lock
    @ .\loading.jl:3695 [inlined]
 [11] _require(pkg::Base.PkgId, env::String)
    @ Base .\loading.jl:2565
 [12] __require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base .\loading.jl:2388
 [13] #invoke_in_world#3
    @ .\essentials.jl:1089 [inlined]
 [14] invoke_in_world
    @ .\essentials.jl:1086 [inlined]
 [15] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base .\loading.jl:2375
 [16] macro expansion
    @ .\loading.jl:2314 [inlined]
 [17] macro expansion
    @ .\lock.jl:273 [inlined]
 [18] __require(into::Module, mod::Symbol)
    @ Base .\loading.jl:2271
 [19] #invoke_in_world#3
    @ .\essentials.jl:1089 [inlined]
 [20] invoke_in_world
    @ .\essentials.jl:1086 [inlined]
 [21] require(into::Module, mod::Symbol)
    @ Base .\loading.jl:2260
 [22] include
    @ .\Base.jl:557 [inlined]
 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base .\loading.jl:2881
 [24] top-level scope
    @ stdin:6
in expression starting at C:\Users\franc\.julia\packages\Tidier\owMbd\src\Tidier.jl:1
in expression starting at stdin:6
  ✗ DuckDB
  ✗ TidierDB
  ✗ Tidier
  0 dependencies successfully precompiled in 24 seconds. 389 already precompiled.

ERROR: The following 1 direct dependency failed to precompile:

Tidier

Failed to precompile Tidier [f0413319-3358-4bb0-8e7c-0c83523a93bd] to "C:\\Users\\franc\\.julia\\compiled\\v1.11\\Tidier\\jl_C1DB.tmp".
ERROR: LoadError: could not load symbol "duckdb_vector_size":
The specified procedure could not be found.
Stacktrace:
 [1] duckdb_vector_size()
   @ DuckDB C:\Users\franc\.julia\packages\DuckDB\8Gvy6\src\api.jl:715
 [2] top-level scope
   @ C:\Users\franc\.julia\packages\DuckDB\8Gvy6\src\database.jl:100
 [3] include(mod::Module, _path::String)
   @ Base .\Base.jl:557
 [4] include(x::String)
   @ DuckDB C:\Users\franc\.julia\packages\DuckDB\8Gvy6\src\DuckDB.jl:1
 [5] top-level scope
   @ C:\Users\franc\.julia\packages\DuckDB\8Gvy6\src\DuckDB.jl:28
 [6] include
   @ .\Base.jl:557 [inlined]
 [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
   @ Base .\loading.jl:2881
 [8] top-level scope
   @ stdin:6
in expression starting at C:\Users\franc\.julia\packages\DuckDB\8Gvy6\src\database.jl:100
in expression starting at C:\Users\franc\.julia\packages\DuckDB\8Gvy6\src\DuckDB.jl:1
in expression starting at stdin:6
ERROR: LoadError: Failed to precompile DuckDB [d2f5444f-75bc-4fdf-ac35-56f514c445e1] to "C:\\Users\\franc\\.julia\\compiled\\v1.11\\DuckDB\\jl_EB27.tmp".
Stacktrace:
  [1] error(s::String)
    @ Base .\error.jl:35
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
    @ Base .\loading.jl:3174
  [3] (::Base.var"#1110#1111"{Base.PkgId})()
    @ Base .\loading.jl:2579
  [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile C:\Users\franc\.julia\juliaup\julia-1.11.3+0.x64.w64.mingw32\share\julia\stdlib\v1.11\FileWatching\src\pidfile.jl:95
  [5] #mkpidlock#6
    @ C:\Users\franc\.julia\juliaup\julia-1.11.3+0.x64.w64.mingw32\share\julia\stdlib\v1.11\FileWatching\src\pidfile.jl:90 [inlined]
  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile C:\Users\franc\.julia\juliaup\julia-1.11.3+0.x64.w64.mingw32\share\julia\stdlib\v1.11\FileWatching\src\pidfile.jl:116
  [7] #invokelatest#2
    @ .\essentials.jl:1057 [inlined]
  [8] invokelatest
    @ .\essentials.jl:1052 [inlined]
  [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base .\loading.jl:3698
 [10] maybe_cachefile_lock
    @ .\loading.jl:3695 [inlined]
 [11] _require(pkg::Base.PkgId, env::String)
    @ Base .\loading.jl:2565
 [12] __require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base .\loading.jl:2388
 [13] #invoke_in_world#3
    @ .\essentials.jl:1089 [inlined]
 [14] invoke_in_world
    @ .\essentials.jl:1086 [inlined]
 [15] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base .\loading.jl:2375
 [16] macro expansion
    @ .\loading.jl:2314 [inlined]
 [17] macro expansion
    @ .\lock.jl:273 [inlined]
 [18] __require(into::Module, mod::Symbol)
    @ Base .\loading.jl:2271
 [19] #invoke_in_world#3
    @ .\essentials.jl:1089 [inlined]
 [20] invoke_in_world
    @ .\essentials.jl:1086 [inlined]
 [21] require(into::Module, mod::Symbol)
    @ Base .\loading.jl:2260
 [22] include
    @ .\Base.jl:557 [inlined]
 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
    @ Base .\loading.jl:2881
 [24] top-level scope
    @ stdin:6
in expression starting at C:\Users\franc\.julia\packages\TidierDB\J2fSt\src\TidierDB.jl:1
in expression starting at stdin:6
ERROR: LoadError: Failed to precompile TidierDB [86993f9b-bbba-4084-97c5-ee15961ad48b] to "C:\\Users\\franc\\.julia\\compiled\\v1.11\\TidierDB\\jl_E74F.tmp".
Stacktrace:
  [1] error(s::String)
    @ Base .\error.jl:35
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
    @ Base .\loading.jl:3174
  [3] (::Base.var"#1110#1111"{Base.PkgId})()
    @ Base .\loading.jl:2579
  [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile C:\Users\franc\.julia\juliaup\julia-1.11.3+0.x64.w64.mingw32\share\julia\stdlib\v1.11\FileWatching\src\pidfile.jl:95
  [5] #mkpidlock#6
    @ C:\Users\franc\.julia\juliaup\julia-1.11.3+0.x64.w64.mingw32\share\julia\stdlib\v1.11\FileWatching\src\pidfile.jl:90 [inlined]
  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile C:\Users\franc\.julia\juliaup\julia-1.11.3+0.x64.w64.mingw32\share\julia\stdlib\v1.11\FileWatching\src\pidfile.jl:116
  [7] #invokelatest#2
    @ .\essentials.jl:1057 [inlined]
  [8] invokelatest
    @ .\essentials.jl:1052 [inlined]
  [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base .\loading.jl:3698
 [10] maybe_cachefile_lock
    @ .\loading.jl:3695 [inlined]
 [11] _require(pkg::Base.PkgId, env::String)
    @ Base .\loading.jl:2565
 [12] __require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base .\loading.jl:2388
 [13] #invoke_in_world#3
    @ .\essentials.jl:1089 [inlined]
 [14] invoke_in_world
    @ .\essentials.jl:1086 [inlined]
 [15] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base .\loading.jl:2375
 [16] macro expansion
    @ .\loading.jl:2314 [inlined]
 [17] macro expansion
    @ .\lock.jl:273 [inlined]
 [18] __require(into::Module, mod::Symbol)
    @ Base .\loading.jl:2271
 [19] #invoke_in_world#3
    @ .\essentials.jl:1089 [inlined]
 [20] invoke_in_world
    @ .\essentials.jl:1086 [inlined]
 [21] require(into::Module, mod::Symbol)
    @ Base .\loading.jl:2260
 [22] include
    @ .\Base.jl:557 [inlined]
 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base .\loading.jl:2881
 [24] top-level scope
    @ stdin:6
in expression starting at C:\Users\franc\.julia\packages\Tidier\owMbd\src\Tidier.jl:1
in expression starting at stdin:
@drizk1
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drizk1 commented Jan 23, 2025 •
edited
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Thank you for reaching out.

This is an ongoing issue with DuckDB.jl on windows machines.

There is a discourse conversation here and a PR

I will reach out and see if there is away to get around this. In the meantime, you may have to individually use the Tidier Pkgs you want ie

using TidierData, TidierPlots, TidierDates

You might be able to get a temp fix based on that discourse conversation by installing the binary from the webpage and setting

ENV["JULIA_DUCKDB_LIBRARY"] = raw"C:\path\to\duckdb.dll"

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@fdekerme @drizk1