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Upgrade TileDB-VCF to 2.15.4 (#548)
* Upgrade TileDB-VCF to 2.15.4 * pin zipp because of Python 3.7 deprecation
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-10
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apis/python/conda-env.yml

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@@ -15,3 +15,4 @@ dependencies:
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- pytest-runner==5.1
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- pytest==5.1.2
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- tiledb
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- zipp<3.16

libtiledbvcf/cmake/Modules/FindTileDB_EP.cmake

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@@ -52,20 +52,20 @@ else()
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# Try to download prebuilt artifacts unless the user specifies to build from source
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if(DOWNLOAD_TILEDB_PREBUILT)
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if (WIN32) # Windows
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SET(DOWNLOAD_URL "https://github.com/TileDB-Inc/TileDB/releases/download/2.15.1/tiledb-windows-x86_64-2.15.1-432d4c2.zip")
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SET(DOWNLOAD_SHA1 "7235a3bc0b5675ed83762a4290d99c6ff9db285f")
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SET(DOWNLOAD_URL "https://github.com/TileDB-Inc/TileDB/releases/download/2.15.4/tiledb-windows-x86_64-2.15.4-57c9edf.zip")
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SET(DOWNLOAD_SHA1 "6cabf3049fcd11a96a93704870b15774343b563f")
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elseif(APPLE) # OSX
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if (CMAKE_OSX_ARCHITECTURES STREQUAL x86_64 OR CMAKE_SYSTEM_PROCESSOR MATCHES "(x86_64)|(AMD64|amd64)|(^i.86$)")
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SET(DOWNLOAD_URL "https://github.com/TileDB-Inc/TileDB/releases/download/2.15.1/tiledb-macos-x86_64-2.15.1-432d4c2.tar.gz")
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SET(DOWNLOAD_SHA1 "f5986f5a85912147e2b839e0968963df6c540688")
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SET(DOWNLOAD_URL "https://github.com/TileDB-Inc/TileDB/releases/download/2.15.4/tiledb-macos-x86_64-2.15.4-57c9edf.tar.gz")
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SET(DOWNLOAD_SHA1 "ca7ef10b01715e277387532591fd4bff8efb1689")
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elseif (CMAKE_OSX_ARCHITECTURES STREQUAL arm64 OR CMAKE_SYSTEM_PROCESSOR MATCHES "^aarch64" OR CMAKE_SYSTEM_PROCESSOR MATCHES "^arm")
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SET(DOWNLOAD_URL "https://github.com/TileDB-Inc/TileDB/releases/download/2.15.1/tiledb-macos-arm64-2.15.1-432d4c2.tar.gz")
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SET(DOWNLOAD_SHA1 "6abb30f9dd7371d5a06a273008179bd57d691e36")
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SET(DOWNLOAD_URL "https://github.com/TileDB-Inc/TileDB/releases/download/2.15.4/tiledb-macos-arm64-2.15.4-57c9edf.tar.gz")
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SET(DOWNLOAD_SHA1 "5f7162a34f62d4d448387b9590823d3dcfe1b816")
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endif()
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else() # Linux
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SET(DOWNLOAD_URL "https://github.com/TileDB-Inc/TileDB/releases/download/2.15.1/tiledb-linux-x86_64-2.15.1-432d4c2.tar.gz")
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SET(DOWNLOAD_SHA1 "9b705af26007b193800f0382c343d421a8b59003")
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SET(DOWNLOAD_URL "https://github.com/TileDB-Inc/TileDB/releases/download/2.15.4/tiledb-linux-x86_64-2.15.4-57c9edf.tar.gz")
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SET(DOWNLOAD_SHA1 "19397dbfef46d796d11f4d8bb80f7bd01230e0a6")
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endif()
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ExternalProject_Add(ep_tiledb
@@ -87,8 +87,8 @@ else()
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else() # Build from source
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ExternalProject_Add(ep_tiledb
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PREFIX "externals"
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URL "https://github.com/TileDB-Inc/TileDB/archive/2.15.1.zip"
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URL_HASH SHA1=8bb70f7534297b184d23b216b1097fdde40829df
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URL "https://github.com/TileDB-Inc/TileDB/archive/2.15.4.zip"
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URL_HASH SHA1=ba020e20a0b6ef9876e3138474e1fdb1d6c4b32b
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DOWNLOAD_NAME "tiledb.zip"
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CMAKE_ARGS
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-DCMAKE_INSTALL_PREFIX=${EP_INSTALL_PREFIX}

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