0.26.0

Changes:

• 52ccd8a Remove WERROR=OFF override for libtiledb build (#575)
• 3ed7119 TileDB 2.17.0 and Java/Spark 0.26.0 (#576)
• a1ebf53 Handle htslib errors reading VCF data (#574)
• 574864c Add TILEDB_WERROR cmake option (#573)
• 11ecc4f remove now-extraneous and confusing markdown file (#567)
• a2a3960 Set the zstd compression level when creating the VCF dataset (#568)

This list of changes was auto generated.

0.25.3

Changes:

• 750009b Update java/spark for version 0.25.3 (#570)
• 098dfc7 Set the zstd compression level when creating the VCF dataset (#568) (#569)

This list of changes was auto generated.

0.25.2

Changes:

• 6f1071a Update Versions for Release 0.25.2 (#565) (#566)
• 51c9bdb fix IAF computation for all samples (#563) (#564)

This list of changes was auto generated.

0.25.1

What's Changed

• [Backport release-0.25] Enable ingestion QACheck when resume is enabled by @github-actions in #558
• [Backport release-0.25] Optimizations for IAF by @github-actions in #559
• [Backport release-0.25] Update Versions for Release 0.25.1 by @github-actions in #561

Full Changelog: 0.25.0...0.25.1

0.24.3

Changes:

• d540ea3 Update java/spark for version 0.24.3 (#557)
• 89f2cdb Optimizations for IAF (#553) (#556)
• 1f94a84 Enable ingestion QACheck when resume is enabled (#552) (#555)

This list of changes was auto generated.

0.25.0

Changes:

• 9518b49 Upgrade TileDB-VCF to 2.16.0, update version for Java/Spark (#551)
• 3edddf8 Upgrade TileDB-VCF to 2.15.4 (#548)
• 335cdad Validate GT value in stats ingestion (#546)
• 267c8de Update to C++ accelerated IAF computation (#538)
• 46caae3 Adamwenocur/sc 26281/fix flag (#543)
• 0df12e1 Finalize stats arrays to optimize fragment layout (#539)

This list of changes was auto generated.

0.24.2

What's Changed

• [Backport release-0.24] Fix handling of a flag by @github-actions in #544
• [Backport release-0.24] Update to C++ accelerated IAF computation by @github-actions in #545
• [Backport release-0.24] Validate GT value in stats ingestion by @github-actions in #547
• [Backport release-0.24] Upgrade TileDB-VCF to 2.15.4 by @github-actions in #550
• Update java/spark for version 0.24.2 by @awenocur in #549

Full Changelog: 0.24.1...0.24.2

0.24.1

Changes:

• 962806d Update java/spark for version 0.24.1 (#541)
• 6bc1aa9 Finalize stats arrays to optimize fragment layout (#539) (#540)

This list of changes was auto generated.

0.24.0

Changes:

• ba4da41 Merge pull request #532 from TileDB-Inc/adamwenocur/sc-28953/update-clang-format
• 5928216 set version for clang-format
• ff2d53a Update default values in python API (#530)
• 7e6034e Add quartodoc and other doc updates (#528)
• e541401 Move to main branch and fix broken links (#527)
• 088d2e1 Update in-repo docs (#525)
• 7f116cb Update dataset creation defaults (#524)
• 612b9ee Merge pull request #523 from TileDB-Inc/quarto-docs
• e6870cd Add in-repo quarto documentation
• 06e69aa Merge pull request #521 from TileDB-Inc/adamwenocur/sc-26161/upgrade

See More

• fb70c88 Upgrade TileDB-VCF to 2.15.1
• 5bc5b80 update Gradle files for release 0.23.1
• 2c3a582 Merge pull request #522 from TileDB-Inc/adamwenocur/sc-27384/pandas
• e17400d remove DataFrame.append
• de66fc5 pin Pandas
• 954b95c Avoid realloc failure in htslib (#517)
• 4a13a94 Add REST ingestion support (#513)
• 4fa021e Add null terminator to combined INFO strings (#454)
• 54ce6fc Merge pull request #507 from jdblischak/build-win-py
• c8c43c6 Build and test on Windows with GitHub Actions
• a50e763 Fix linking for Python client build on Windows
• 4fdd0e9 Build Python client on Windows
• a558973 Upgrade TileDB-VCF to 2.15 (#511)

This list of changes was auto generated.

0.23.1

Changes:

• 085eb8c Merge pull request #520 from TileDB-Inc/adamwenocur/sc-27299/release
• 0282440 Upgrade TileDB-VCF to 2.15.1
• e575483 update Gradle files for release 0.23.1
• 47709eb Add null terminator to combined INFO strings (#454) (#519)
• 9788060 Avoid realloc failure in htslib (#517) (#518)
• 04d0912 Add REST ingestion support (#513) (#516)
• 3e40b67 Revert disabled test (#512)

This list of changes was auto generated.