CompatHelper: bump compat for AbstractMCMC to 4, (keep existing compat) (#391)

This pull request changes the compat entry for the `AbstractMCMC` package from `2, 3.0` to `2, 3.0, 4`.
This keeps the compat entries for earlier versions.



Note: I have not tested your package with this new compat entry.
It is your responsibility to make sure that your package tests pass before you merge this pull request.

Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: David Widmann <[email protected]>

Author: 3 people

Project.toml

@@ -1,6 +1,6 @@
 name = "DynamicPPL"
 uuid = "366bfd00-2699-11ea-058f-f148b4cae6d8"
-version = "0.17.10"
+version = "0.18.0"
 
 [deps]
 AbstractMCMC = "80f14c24-f653-4e6a-9b94-39d6b0f70001"
@@ -17,7 +17,7 @@ Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
 ZygoteRules = "700de1a5-db45-46bc-99cf-38207098b444"
 
 [compat]
-AbstractMCMC = "2, 3.0"
+AbstractMCMC = "2, 3.0, 4"
 AbstractPPL = "0.5.1"
 BangBang = "0.3"
 Bijectors = "0.5.2, 0.6, 0.7, 0.8, 0.9, 0.10"

src/DynamicPPL.jl

@@ -151,23 +151,4 @@ include("loglikelihoods.jl")
 include("submodel_macro.jl")
 include("test_utils.jl")
 
-# Deprecations
-@deprecate empty!(vi::VarInfo) empty!!(vi::VarInfo)
-@deprecate push!(vi::AbstractVarInfo, vn::VarName, r, dist::Distribution) push!!(
-    vi::AbstractVarInfo, vn::VarName, r, dist::Distribution
-)
-@deprecate push!(
-    vi::AbstractVarInfo, vn::VarName, r, dist::Distribution, sampler::AbstractSampler
-) push!!(vi::AbstractVarInfo, vn::VarName, r, dist::Distribution, sampler::AbstractSampler)
-@deprecate push!(vi::AbstractVarInfo, vn::VarName, r, dist::Distribution, gid::Selector) push!!(
-    vi::AbstractVarInfo, vn::VarName, r, dist::Distribution, gid::Selector
-)
-@deprecate push!(
-    vi::AbstractVarInfo, vn::VarName, r, dist::Distribution, gid::Set{Selector}
-) push!!(vi::AbstractVarInfo, vn::VarName, r, dist::Distribution, gid::Set{Selector})
-
-@deprecate setlogp!(vi, logp) setlogp!!(vi, logp)
-@deprecate acclogp!(vi, logp) acclogp!!(vi, logp)
-@deprecate resetlogp!(vi) resetlogp!!(vi)
-
 end # module

test/Project.toml

@@ -20,7 +20,7 @@ Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c"
 Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f"
 
 [compat]
-AbstractMCMC = "2.1, 3.0"
+AbstractMCMC = "2.1, 3.0, 4"
 AbstractPPL = "0.5.1"
 Bijectors = "0.9.5, 0.10"
 Distributions = "0.25"

test/sampler.jl

@@ -65,7 +65,13 @@
 
             # parallel sampling
             chains = sample(
-                model, sampler, MCMCThreads(), 1, 10; init_params=0.2, progress=false
+                model,
+                sampler,
+                MCMCThreads(),
+                1,
+                10;
+                init_params=fill(0.2, 10),
+                progress=false,
             )
             for c in chains
                 @test c[1].metadata.p.vals == [0.2]
@@ -86,7 +92,13 @@
 
             # parallel sampling
             chains = sample(
-                model, sampler, MCMCThreads(), 1, 10; init_params=[4, -1], progress=false
+                model,
+                sampler,
+                MCMCThreads(),
+                1,
+                10;
+                init_params=fill([4, -1], 10),
+                progress=false,
             )
             for c in chains
                 @test c[1].metadata.s.vals == [4]
@@ -106,7 +118,7 @@
                 MCMCThreads(),
                 1,
                 10;
-                init_params=[missing, -1],
+                init_params=fill([missing, -1], 10),
                 progress=false,
             )
             for c in chains

test/turing/Project.toml

@@ -5,6 +5,6 @@ Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
 Turing = "fce5fe82-541a-59a6-adf8-730c64b5f9a0"
 
 [compat]
-DynamicPPL = "0.17"
+DynamicPPL = "0.18"
 Turing = "0.18, 0.19, 0.20"
 julia = "1.3"