Enhancement: Refactor tools

[j4lando]

Description

Current State

The tools organization and testing infrastructure need more thoughtful planning before we begin creating new tools.

Goals

1. Early Architecture Design: Establish a clear structure for tool organization to support parallel simulation execution
2. Testing Framework: Develop a robust testing approach for the tools
3. Scalability: Design the architecture to support future tool additions

Questions & Considerations

• Is parallel execution of simulations necessary?
• What is the best way to organize tools for maintainability?
• How should tools communicate with each other?

Request for Input

Since this requires architectural thinking, we're seeking ideas and examples in the comments section. Please share:

• Best practices for tool organization
• Examples of similar architectures
• Testing strategies for simulation tools

Note: This issue should be addressed before work begins on other tool-related issues.

---