From 16461b2f43b2f91566a641704c11dd26ae916784 Mon Sep 17 00:00:00 2001 From: Andrew Pulsipher Date: Mon, 4 Nov 2024 12:36:12 -0700 Subject: [PATCH] Update comments in vignette --- vignettes/likelihood-free-mcmc.Rmd | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/vignettes/likelihood-free-mcmc.Rmd b/vignettes/likelihood-free-mcmc.Rmd index b694e956..c5e87fe4 100644 --- a/vignettes/likelihood-free-mcmc.Rmd +++ b/vignettes/likelihood-free-mcmc.Rmd @@ -81,6 +81,7 @@ sumfun <- function(dat) { } # Define the LFMCMC proposal function +# - Based on proposal_fun_normal from lfmcmc-meat.hpp propfun <- function(params_prev) { res <- params_prev + rnorm(length(params_prev), ) return(res) @@ -97,7 +98,7 @@ kernelfun <- function(stats_now, stats_obs, epsilon) { return(ifelse(sqrt(ans) < epsilon, 1.0, 0.0)) } -# Create the LFMCMC model using a norm reflective proposal function and a Gaussian kernel function +# Create the LFMCMC model lfmcmc_model <- LFMCMC(model_sir) |> set_simulation_fun(simfun) |> set_summary_fun(sumfun) |>