From 9fd564e5194309b0bc1c3077544f034be9a987a1 Mon Sep 17 00:00:00 2001 From: Yunuuuu Date: Tue, 21 Jan 2025 00:06:41 +0800 Subject: [PATCH] docs update --- README.Rmd | 6 +++--- README.md | 6 +++--- 2 files changed, 6 insertions(+), 6 deletions(-) diff --git a/README.Rmd b/README.Rmd index b4bb2739..fda06488 100644 --- a/README.Rmd +++ b/README.Rmd @@ -188,13 +188,13 @@ remotes::install_github("Yunuuuu/ggalign") | -------------------------------------------- | ----------------------------------------------------- | ----------------- | ----------------------------------- | ------------------------------------------------------------------------- | | **Data input** | Various, and can be easily extended | fixed | Various, and can be easily extended | fixed | | **Plot Type** | Wide variety, provided by ggplot2 | Many, but limited | ✅ | Many, but limited | -| **Reorder observations** | ✅ | ✅ | ✅ | Heatmap Only (Cannot be used in Stack Layout) | -| **Group observations into different panels** | ✅ | ✅ | ❌ | Heatmap Only (Cannot be used in Stack Layout) | +| **Reorder observations** | ✅ | ✅ | ✅ | Heatmap Only | +| **Group observations into different panels** | ✅ | ✅ | ❌ | Heatmap Only | | **Clustering algorithm** | Kmeans,Hierarchical Clustering and arbitary algorithm | ❌ | ❌ | Kmeans,Hierarchical Clustering, but can provide clustering group directly | | **Legends Creation** | Automatic | Manual | Automatic | Limited automatic, requires manual add | | **Legends Position** | Anywhere, can be controlled for a single plot | ? | Anywhere | Four sides, can only be placed on one side at a time | | **Scientific Color Palettes** | Many | Limited | Many | Limited | -| **Dendrogram** | Tree from Both `hclust` or `ape` | `hclust` only | Tree from Both `hclust` or `ape` | `hclust` only (Cannot be used in StackLayout) | +| **Dendrogram** | Tree from Both `hclust` or `ape` | `hclust` only | ❌ | `hclust` only | | **Tanglegram** | ✅ | ❌ | ❌ | ❌ | | **3D Heatmap** | ✅ | ❌ | ❌ | ✅ | | **Oncoplot** | ✅ | ✅ | ❌ | ✅ | diff --git a/README.md b/README.md index 73e14828..c531b14a 100644 --- a/README.md +++ b/README.md @@ -181,13 +181,13 @@ remotes::install_github("Yunuuuu/ggalign") |----------------------------------------------|-------------------------------------------------------|-------------------|-------------------------------------|---------------------------------------------------------------------------| | **Data input** | Various, and can be easily extended | fixed | Various, and can be easily extended | fixed | | **Plot Type** | Wide variety, provided by ggplot2 | Many, but limited | ✅ | Many, but limited | -| **Reorder observations** | ✅ | ✅ | ✅ | Heatmap Only (Cannot be used in Stack Layout) | -| **Group observations into different panels** | ✅ | ✅ | ❌ | Heatmap Only (Cannot be used in Stack Layout) | +| **Reorder observations** | ✅ | ✅ | ✅ | Heatmap Only | +| **Group observations into different panels** | ✅ | ✅ | ❌ | Heatmap Only | | **Clustering algorithm** | Kmeans,Hierarchical Clustering and arbitary algorithm | ❌ | ❌ | Kmeans,Hierarchical Clustering, but can provide clustering group directly | | **Legends Creation** | Automatic | Manual | Automatic | Limited automatic, requires manual add | | **Legends Position** | Anywhere, can be controlled for a single plot | ? | Anywhere | Four sides, can only be placed on one side at a time | | **Scientific Color Palettes** | Many | Limited | Many | Limited | -| **Dendrogram** | Tree from Both `hclust` or `ape` | `hclust` only | Tree from Both `hclust` or `ape` | `hclust` only (Cannot be used in StackLayout) | +| **Dendrogram** | Tree from Both `hclust` or `ape` | `hclust` only | ❌ | `hclust` only | | **Tanglegram** | ✅ | ❌ | ❌ | ❌ | | **3D Heatmap** | ✅ | ❌ | ❌ | ✅ | | **Oncoplot** | ✅ | ✅ | ❌ | ✅ |