- vignettes: working folder for collage generator
- combine vignettes_new_level_0, HE_001_rotated, FFPE PostRep 001 and multistain and FFPE PostRep 003-006， 008-010
- train：slide 001,004-006,008,010, all multistain but tubule_HE_001(name as HE_001_...)
- validation: slide 003, 009, tubule_HE_001
ds label
train arteriole 23
artery 49
distal_tubule 126
glomerulus 157
glomerulus_gs* 6
proximal_tubule 150
validation arteriole 25
artery 18
distal_tubule 81
glomerulus 81
glomerulus_gs* 4
proximal_tubule 79
*not included
- test: slide 002 and 007 (not included here)
- exclude some incompleted tubules and glom
- patch_annotation:
- original patch of slide and tubules masks
- HE_001 from multistain and 11000_16000_0 from FFPE PostRep 001.svs
- 13600_18000_0 and 20000_14800_0 from FFPE PostRep 001.svs. Full annotation for multiple labels. Attache a labelmap.txt.
- other archived data transfered to data repo