From 1ba8a432f7a82ba406ccef26f8e04736c03aef90 Mon Sep 17 00:00:00 2001 From: Till Hartmann Date: Mon, 13 Jan 2025 09:25:15 +0100 Subject: [PATCH] use fs fixture in test_run_seasnap_itransfer_results_smoke_test --- tests/test_seasnap_itransfer_results.py | 4 +--- 1 file changed, 1 insertion(+), 3 deletions(-) diff --git a/tests/test_seasnap_itransfer_results.py b/tests/test_seasnap_itransfer_results.py index dbcc0488..3c879808 100644 --- a/tests/test_seasnap_itransfer_results.py +++ b/tests/test_seasnap_itransfer_results.py @@ -37,7 +37,7 @@ def test_run_seasnap_itransfer_results_nothing(capsys): assert res.err -def test_run_seasnap_itransfer_results_smoke_test(mocker): +def test_run_seasnap_itransfer_results_smoke_test(mocker, fs): # --- setup arguments dest_path = "/irods/dest" fake_base_path = "/base/path" @@ -57,7 +57,6 @@ def test_run_seasnap_itransfer_results_smoke_test(mocker): # Setup fake file system but only patch selected modules. We cannot use the Patcher approach here as this would # break biomedsheets. - fs = fake_filesystem.FakeFilesystem() fake_os = fake_filesystem.FakeOsModule(fs) fake_pl = fake_pathlib.FakePathlibModule(fs) @@ -83,7 +82,6 @@ def test_run_seasnap_itransfer_results_smoke_test(mocker): fs.remove(fake_file_paths[3]) # --- mock modules - mocker.patch("glob.os", fake_os) mocker.patch("cubi_tk.sea_snap.itransfer_results.pathlib", fake_pl) mocker.patch("cubi_tk.sea_snap.itransfer_results.os", fake_os) mocker.patch("cubi_tk.snappy.itransfer_common.os", fake_os)