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lines changed Original file line number Diff line number Diff line change @@ -142,7 +142,6 @@ function process(){
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$ features = $ this ->retrieveSections ("FEATURES " , $ sectionsRaw );
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$ parsed_features_arr = $ this ->parseFeatures ($ features );
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- print_r ($ parsed_features_arr );exit ;
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//get the source section
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$ source = $ this ->retrieveSections ("SOURCE " , $ sectionsRaw );
@@ -164,7 +163,11 @@ function process(){
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parent ::triplifyString ($ gb_res , $ this ->getVoc ().'source ' , utf8_encode ($ parsed_source_arr [0 ])).
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parent ::QQuadO_URL ($ gb_res , $ this ->getVoc ().'fasta-seq ' , 'https://www.ncbi.nlm.nih.gov/sviewer/viewer.cgi?sendto=on&db=nucest&dopt=fasta&val= ' .$ parsed_version_arr ['gi ' ])
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);
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-
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+
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+ foreach ($ parsed_features_arr as $ aFeature ) {
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+ print_r ($ aFeature );
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+ }
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+
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foreach ($ parsed_accession_arr [0 ] as $ acc ){
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parent ::AddRDF (
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parent ::triplifyString ($ gb_res , $ this ->getVoc ()."accession " , $ acc )
@@ -225,6 +228,7 @@ function process(){
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if (count ($ matches ) == 0 ){
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$ gb_record_str .= $ aLine ;
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}
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+ exit ;
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}//while
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}
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