🙉

Author: cboettig

Dockerfile

@@ -1,19 +1,15 @@
+# Choose any ubuntu-based Jupyter image, e.g.:
 FROM quay.io/jupyter/minimal-notebook
 
+# Install R, RStudio on any Ubuntu LTS
 USER root
-
-# Install R
-RUN curl -s https://raw.githubusercontent.com/boettiger-lab/repo2docker-r/refs/heads/main/install_r.sh | bash
-
-## RStudio
-RUN conda install jupyter-rsession-proxy
 RUN curl -s https://raw.githubusercontent.com/boettiger-lab/repo2docker-r/refs/heads/main/install_r.sh | bash
+RUN curl -s https://raw.githubusercontent.com/boettiger-lab/repo2docker-r/refs/heads/main/install_rstudio.sh | bash
 
-COPY environment.yml environment.yml
-RUN conda env update -f environment.yml
-
+# When run as root, install.r automagically handles any necessary apt-gets
 COPY install.r install.r
 RUN Rscript install.r
 
 USER ${NB_USER}
-
+COPY environment.yml environment.yml
+RUN conda env update -f environment.yml