Lesson (instructor, teaching) contents that are pulled and rendered in the Carpentries incubator lesson website and the Jupyter notebook contents are out of sync: the latter correspond to the contents removed in PR #41, and such contents seem to be a pre-Carpentries version of the contents.
However, much of that material is relevant, and needed, as some of the current lessons (e.g. Data organization with BIDS) have little content, and/or no exercises.
Similarly, some figures that were included in the removed episodes_md Markdown files or the Jupyter notebooks are not included in the rendered materials.
Specifically:
Also, solutions to the exercises need to be included in the Markdown and Jupyter files: a way to do this can be found in the SDC-BIDS-dMRI lesson.
Note that removing the _episodes_md was a necessary step to avoid errors in the transition to the Carpentries Workbench infrastructure.
Lesson (instructor, teaching) contents that are pulled and rendered in the Carpentries incubator lesson website and the Jupyter notebook contents are out of sync: the latter correspond to the contents removed in PR #41, and such contents seem to be a pre-Carpentries version of the contents.
However, much of that material is relevant, and needed, as some of the current lessons (e.g.
Data organization with BIDS) have little content, and/or no exercises.Similarly, some figures that were included in the removed
episodes_mdMarkdown files or the Jupyter notebooks are not included in the rendered materials.Specifically:
_episodes_md/02-anatomy-of-nifti: the BIDS JSON metada part ("In addition to metadata embedded in the NIfTI header, the (...)") needs to be recovered, and probably transferred to theData organization with BIDSepisode._episodes_md/03-data-organization-bids: almost all content needs to be recovered._episodes_md/04-open-mri-datasets: large parts need to be recovered: excerpts related toOpenNeuro;DataLadintroduction, first commands; almost all contents in theExploring a bids datasetand all of its exercises; all exercises usingBIDSlayout._episodes_md/05-bids-derivatives: some minor passages need to be recovered.Also, solutions to the exercises need to be included in the Markdown and Jupyter files: a way to do this can be found in the SDC-BIDS-dMRI lesson.
Note that removing the
_episodes_mdwas a necessary step to avoid errors in the transition to the Carpentries Workbench infrastructure.