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buildMatDRAM.sh
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#!/bin/bash
####################################################################################################################################
####################################################################################################################################
####
#### MIT License
####
#### ParaMonte: plain powerful parallel Monte Carlo library.
####
#### Copyright (C) 2012-present, The Computational Data Science Lab
####
#### This file is part of the ParaMonte library.
####
#### Permission is hereby granted, free of charge, to any person obtaining a
#### copy of this software and associated documentation files (the "Software"),
#### to deal in the Software without restriction, including without limitation
#### the rights to use, copy, modify, merge, publish, distribute, sublicense,
#### and/or sell copies of the Software, and to permit persons to whom the
#### Software is furnished to do so, subject to the following conditions:
####
#### The above copyright notice and this permission notice shall be
#### included in all copies or substantial portions of the Software.
####
#### THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
#### EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
#### MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
#### IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM,
#### DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR
#### OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE
#### OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
####
#### ACKNOWLEDGMENT
####
#### ParaMonte is an honor-ware and its currency is acknowledgment and citations.
#### As per the ParaMonte library license agreement terms, if you use any parts of
#### this library for any purposes, kindly acknowledge the use of ParaMonte in your
#### work (education/research/industry/development/...) by citing the ParaMonte
#### library as described on this page:
####
#### https://github.com/cdslaborg/paramonte/blob/main/ACKNOWLEDGMENT.md
####
####################################################################################################################################
####################################################################################################################################
#
# NOTE: This is not a standalone file. This file must be called via install.sh script file.
# NOTE: This is the Bash script file that builds the ParaMonte MatDRAM library.
# NOTE: Do not change the contents of this file unless you know what the consequences are.
BUILD_NAME="MatDRAM"; export BUILD_NAME
verify() {
if [ $1 -eq 0 ]; then
echo >&2 "-- ${BUILD_NAME} - ParaMonte::MatDRAM $2 appears to have succeeded."
else
echo >&2
echo >&2 " -- ${BUILD_NAME} - FATAL: ParaMonte::MatDRAM $2 appears to have failed."
echo >&2 " -- ${BUILD_NAME} - FATAL: If all ParaMonte::MatDRAM installation attempts fail, please report this issue at"
echo >&2 " -- ${BUILD_NAME} - FATAL: "
echo >&2 " -- ${BUILD_NAME} - FATAL: https://github.com/shahmoradi/paramonte/issues"
echo >&2 " -- ${BUILD_NAME} - FATAL: "
echo >&2 " -- ${BUILD_NAME} - FATAL: or by contacting the ParaMonte authors directly (e.g., [email protected])."
echo >&2
echo >&2 " -- ${BUILD_NAME} - gracefully exiting."
echo >&2
exit 1
fi
}
printCopyFailMsg() {
echo >&2
echo >&2 "-- ParaMonteExample${LANG_NAME} - Copy action failed. Please resolve the error. Gracefully exiting..."
echo >&2
exit 1
}
FILE_DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" >/dev/null 2>&1 && pwd )"
ParaMonte_ROOT_DIR="${FILE_DIR}"
export ParaMonte_ROOT_DIR
ParaMonteExample_SRC_DIR="${ParaMonte_ROOT_DIR}/example"
ParaMonteInterface_SRC_DIR="${ParaMonte_ROOT_DIR}/src/interface"
echo >&2 "-- ${BUILD_NAME} - project root directory: ${ParaMonte_ROOT_DIR}"
#:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
#: build MatDRAM library example objects and executable
#:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
echo >&2
echo >&2 "::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::"
echo >&2 ":::: ::::"
echo >&2 " MatDRAM MATLAB Library Build "
echo >&2 ":::: ::::"
echo >&2 "::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::"
echo >&2
#:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
#: make bin directory
#:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
ParaMonte_BIN_DIR="${ParaMonte_ROOT_DIR}/bin"
echo >&2 -- "${BUILD_NAME} - The MatDRAM binaries directory: ${ParaMonte_BIN_DIR}"
if ! [ -d "${ParaMonte_BIN_DIR}" ]; then
mkdir "${ParaMonte_BIN_DIR}"
verify $? "binary directory creation"
fi
#:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
#: setup examples' interface language
#:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
LANG_FILE_EXT="m"
LANG_NAME="MATLAB"
if [ -z ${LANG_NAME+x} ]; then
echo >&2
echo >&2 "-- ${BUILD_NAME}Example - Fatal Error: unrecognized or no language specified. exiting..."
echo >&2
exit 1
fi
#:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
#: build examples
#:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
# select examples to build
EXAM_LIST="mvn"
# set and make example directories
MatDRAM_BLD_DIR="${ParaMonte_ROOT_DIR}/build/libparamonte_matdram"
MatDRAM_EXP_DIR="${MatDRAM_BLD_DIR}/example"
ParaMonteInterface_SRC_DIR_CURRENT="${ParaMonteInterface_SRC_DIR}/${LANG_NAME}"
echo >&2
echo >&2 "-- ${BUILD_NAME} - generating the MatDRAM library examples in ${LANG_NAME} language..."
echo >&2 "-- ${BUILD_NAME} - The MatDRAM ${LANG_NAME} examples directory: ${MatDRAM_EXP_DIR}"
for EXAM_NAME in $EXAM_LIST
do
MatDRAM_BLD_DIR_CURRENT="${MatDRAM_EXP_DIR}/${EXAM_NAME}"
echo >&2 "-- ${BUILD_NAME} - The MatDRAM library ${EXAM_NAME} example directory: ${MatDRAM_BLD_DIR_CURRENT}"
if [ -d "${MatDRAM_BLD_DIR_CURRENT}" ]; then
echo >&2 "-- ${BUILD_NAME} - previous example build detected. deleting the old contents..."
rm -rf "${MatDRAM_BLD_DIR_CURRENT}"
verify $? "deletion of the old files"
echo >&2 "-- ${BUILD_NAME} - regenerating the MatDRAM library ${EXAM_NAME} example directory: ${MatDRAM_BLD_DIR_CURRENT}"
fi
mkdir -p "${MatDRAM_BLD_DIR_CURRENT}/"
verify $? "ParaMonte::MatDRAM example directory creation"
# The MatDRAM library example required files
echo >&2 "-- ${BUILD_NAME} - copying the MatDRAM library ${EXAM_NAME} example required files in ${LANG_NAME} language..."
# The MatDRAM library README.md file
# echo >&2 "-- ${BUILD_NAME} - copying the MatDRAM library README.md file..."
# echo >&2 "-- ${BUILD_NAME} - from: ${ParaMonteInterface_SRC_DIR_CURRENT}/README.md"
# echo >&2 "-- ${BUILD_NAME} - to: ${MatDRAM_BLD_DIR_CURRENT}/paramonte/README.md"
# cp "${ParaMonteInterface_SRC_DIR_CURRENT}/README.md" "${MatDRAM_BLD_DIR_CURRENT}/README.md" || printCopyFailMsg
# The MatDRAM library CHANGES.md file
# echo >&2 "-- ${BUILD_NAME} - copying the MatDRAM library CHANGES.md file..."
# echo >&2 "-- ${BUILD_NAME} - from: ${ParaMonteInterface_SRC_DIR_CURRENT}/CHANGES.md"
# echo >&2 "-- ${BUILD_NAME} - to: ${MatDRAM_BLD_DIR_CURRENT}/paramonte/CHANGES.md"
# copy "${ParaMonteInterface_SRC_DIR_CURRENT}/CHANGES.md" "${MatDRAM_BLD_DIR_CURRENT}/CHANGES.md" || printCopyFailMsg
# The MatDRAM library license file
echo >&2
echo >&2 "-- ${BUILD_NAME} - copying the MatDRAM library license file..."
echo >&2 "-- ${BUILD_NAME} - from: ${ParaMonte_ROOT_DIR}/LICENSE.md"
echo >&2 "-- ${BUILD_NAME} - to: ${MatDRAM_BLD_DIR_CURRENT}/LICENSE.md"
cp "${ParaMonte_ROOT_DIR}/LICENSE.md" "${MatDRAM_BLD_DIR_CURRENT}/LICENSE.md" || printCopyFailMsg
# The MatDRAM library README file
echo >&2
echo >&2 "-- ${BUILD_NAME} - copying the MatDRAM library license file..."
echo >&2 "-- ${BUILD_NAME} - from: ${ParaMonteInterface_SRC_DIR_CURRENT}/README.MatDRAM.md"
echo >&2 "-- ${BUILD_NAME} - to: ${MatDRAM_BLD_DIR_CURRENT}/README.MatDRAM.md"
cp "${ParaMonteInterface_SRC_DIR_CURRENT}/README.MatDRAM.md" "${MatDRAM_BLD_DIR_CURRENT}/README.md" || printCopyFailMsg
# The MatDRAM library interface files
echo >&2
echo >&2 "-- ${BUILD_NAME} - from: ${ParaMonteInterface_SRC_DIR_CURRENT}/libparamonte_matdram"
echo >&2 "-- ${BUILD_NAME} - to: ${MatDRAM_BLD_DIR_CURRENT}/paramonte/"
cp -R "${ParaMonteInterface_SRC_DIR_CURRENT}/paramonte" "${MatDRAM_BLD_DIR_CURRENT}/paramonte/" || printCopyFailMsg
# The MatDRAM library ParaDRAM class method files, required for postprocess reading of output of data
COPY_PATH_SOURCE="${ParaMonteInterface_SRC_DIR_CURRENT}/paramonte/interface/@ParaDRAM/readMarkovChain.m"
COPY_PATH_DESTIN="${MatDRAM_BLD_DIR_CURRENT}/paramonte/kernel/@ParaDRAM_class/"
echo >&2
echo >&2 "-- ${BUILD_NAME} - from: ${COPY_PATH_SOURCE}"
echo >&2 "-- ${BUILD_NAME} - to: ${COPY_PATH_DESTIN}"
cp "${COPY_PATH_SOURCE}" "${COPY_PATH_DESTIN}" || printCopyFailMsg
COPY_PATH_SOURCE="${ParaMonteInterface_SRC_DIR_CURRENT}/paramonte/interface/@ParaMonteSampler/readChain.m"
COPY_PATH_DESTIN="${MatDRAM_BLD_DIR_CURRENT}/paramonte/kernel/@ParaDRAM_class/"
echo >&2
echo >&2 "-- ${BUILD_NAME} - from: ${COPY_PATH_SOURCE}"
echo >&2 "-- ${BUILD_NAME} - to: ${COPY_PATH_DESTIN}"
cp "${COPY_PATH_SOURCE}" "${COPY_PATH_DESTIN}" || printCopyFailMsg
COPY_PATH_SOURCE="${ParaMonteInterface_SRC_DIR_CURRENT}/paramonte/interface/@ParaMonteSampler/readSample.m"
COPY_PATH_DESTIN="${MatDRAM_BLD_DIR_CURRENT}/paramonte/kernel/@ParaDRAM_class/"
echo >&2
echo >&2 "-- ${BUILD_NAME} - from: ${COPY_PATH_SOURCE}"
echo >&2 "-- ${BUILD_NAME} - to: ${COPY_PATH_DESTIN}"
cp "${COPY_PATH_SOURCE}" "${COPY_PATH_DESTIN}" || printCopyFailMsg
COPY_PATH_SOURCE="${ParaMonteInterface_SRC_DIR_CURRENT}/paramonte/interface/@ParaMonteSampler/readRestart.m"
COPY_PATH_DESTIN="${MatDRAM_BLD_DIR_CURRENT}/paramonte/kernel/@ParaDRAM_class/"
echo >&2
echo >&2 "-- ${BUILD_NAME} - from: ${COPY_PATH_SOURCE}"
echo >&2 "-- ${BUILD_NAME} - to: ${COPY_PATH_DESTIN}"
cp "${COPY_PATH_SOURCE}" "${COPY_PATH_DESTIN}" || printCopyFailMsg
COPY_PATH_SOURCE="${ParaMonteInterface_SRC_DIR_CURRENT}/paramonte/interface/@ParaMonteSampler/readReport.m"
COPY_PATH_DESTIN="${MatDRAM_BLD_DIR_CURRENT}/paramonte/kernel/@ParaDRAM_class/"
echo >&2
echo >&2 "-- ${BUILD_NAME} - from: ${COPY_PATH_SOURCE}"
echo >&2 "-- ${BUILD_NAME} - to: ${COPY_PATH_DESTIN}"
cp "${COPY_PATH_SOURCE}" "${COPY_PATH_DESTIN}" || printCopyFailMsg
COPY_PATH_SOURCE="${ParaMonteInterface_SRC_DIR_CURRENT}/paramonte/interface/@ParaMonteSampler/readTabular.m"
COPY_PATH_DESTIN="${MatDRAM_BLD_DIR_CURRENT}/paramonte/kernel/@ParaDRAM_class/"
echo >&2
echo >&2 "-- ${BUILD_NAME} - from: ${COPY_PATH_SOURCE}"
echo >&2 "-- ${BUILD_NAME} - to: ${COPY_PATH_DESTIN}"
cp "${COPY_PATH_SOURCE}" "${COPY_PATH_DESTIN}" || printCopyFailMsg
COPY_PATH_SOURCE="${ParaMonteInterface_SRC_DIR_CURRENT}/paramonte/interface/@ParaMonteSampler/getFilePathList.m"
COPY_PATH_DESTIN="${MatDRAM_BLD_DIR_CURRENT}/paramonte/kernel/@ParaDRAM_class/"
echo >&2
echo >&2 "-- ${BUILD_NAME} - from: ${COPY_PATH_SOURCE}"
echo >&2 "-- ${BUILD_NAME} - to: ${COPY_PATH_DESTIN}"
cp "${COPY_PATH_SOURCE}" "${COPY_PATH_DESTIN}" || printCopyFailMsg
# The MatDRAM library banner file
echo >&2
echo >&2 "-- ${BUILD_NAME} - copying the MatDRAM library auxiliary files"
echo >&2 "-- ${BUILD_NAME} - from: ${ParaMonteInterface_SRC_DIR}/auxil/"
echo >&2 "-- ${BUILD_NAME} - to: ${MatDRAM_BLD_DIR_CURRENT}/paramonte/auxil/"
cp -R "${ParaMonteInterface_SRC_DIR}/auxil" "${MatDRAM_BLD_DIR_CURRENT}/paramonte/" || printCopyFailMsg
# The MatDRAM library kernel version file (must appear only after the above)
echo >&2
echo >&2 "-- ${BUILD_NAME} - copying the MatDRAM library kernel version file..."
echo >&2 "-- ${BUILD_NAME} - from: ${ParaMonte_ROOT_DIR}/.VERSION"
echo >&2 "-- ${BUILD_NAME} - to: ${MatDRAM_BLD_DIR_CURRENT}/paramonte/auxil/.VERSION_KERNEL"
cp "${ParaMonte_ROOT_DIR}/.VERSION" "${MatDRAM_BLD_DIR_CURRENT}/paramonte/auxil/.VERSION_KERNEL" || printCopyFailMsg
# The MatDRAM library interface version file (must appear only after the above)
echo >&2
echo >&2 "-- ${BUILD_NAME} - copying the MatDRAM library interface version file..."
echo >&2 "-- ${BUILD_NAME} - from: ${ParaMonteInterface_SRC_DIR_CURRENT}/.VERSION"
echo >&2 "-- ${BUILD_NAME} - to: ${MatDRAM_BLD_DIR_CURRENT}/paramonte/auxil/.VERSION_INTERFACE"
cp "${ParaMonteInterface_SRC_DIR_CURRENT}/.VERSION" "${MatDRAM_BLD_DIR_CURRENT}/paramonte/auxil/.VERSION_INTERFACE" || printCopyFailMsg
# The MatDRAM library example input files
ParaMonteExample_SRC_DIR_CURRENT="${ParaMonteExample_SRC_DIR}/${EXAM_NAME}/${LANG_NAME}"
mainFileName=main.${LANG_FILE_EXT}
echo >&2
echo >&2 "-- ${BUILD_NAME} - copying the MatDRAM library ${EXAM_NAME} example source files in ${LANG_NAME} language..."
cp "${ParaMonteExample_SRC_DIR}/${mainFileName}" "${MatDRAM_BLD_DIR_CURRENT}/" || printCopyFailMsg
echo >&2
echo >&2 "-- ${BUILD_NAME} - from: ${ParaMonteExample_SRC_DIR_CURRENT}/*"
echo >&2 "-- ${BUILD_NAME} - to: ${MatDRAM_BLD_DIR_CURRENT}"
cp -R "${ParaMonteExample_SRC_DIR_CURRENT}"/* "${MatDRAM_BLD_DIR_CURRENT}/" || printCopyFailMsg
done
echo >&2
#:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
#: copy the first example to the bin directory
#:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
MatDRAM_BLD_DIR_CURRENT="${MatDRAM_EXP_DIR}/mvn"
MatDRAMExample_BIN_DIR_CURRENT="${ParaMonte_BIN_DIR}/libparamonte_matdram"
echo >&2 "-- ${BUILD_NAME} - The MatDRAM ${LANG_NAME} library binary directory: ${MatDRAMExample_BIN_DIR_CURRENT}"
if ! [ -d ${MatDRAMExample_BIN_DIR_CURRENT} ]; then
mkdir "${MatDRAMExample_BIN_DIR_CURRENT}/"
verify $? "directory creation"
fi
echo >&2
echo >&2 "-- ${BUILD_NAME} - copying the MatDRAM library files to the bin folder..."
echo >&2 "-- ${BUILD_NAME} - from: ${MatDRAM_BLD_DIR_CURRENT}"
echo >&2 "-- ${BUILD_NAME} - to: ${MatDRAMExample_BIN_DIR_CURRENT}"
cp -R "${MatDRAM_BLD_DIR_CURRENT}"/* "${MatDRAMExample_BIN_DIR_CURRENT}" || printCopyFailMsg
#:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
#: build test
#:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
MatDRAMTest_BLD_DIR="${MatDRAM_BLD_DIR}/test"
MatDRAMTest_SRC_DIR="${ParaMonteInterface_SRC_DIR_CURRENT}/test"
echo >&2
echo >&2 "-- ${BUILD_NAME} - copying the MatDRAM library files to the test folder..."
echo >&2 "-- ${BUILD_NAME} - from: ${MatDRAM_BLD_DIR_CURRENT}"
echo >&2 "-- ${BUILD_NAME} - to: ${MatDRAMTest_BLD_DIR}"
cp -R "${MatDRAM_BLD_DIR_CURRENT}"/* "${MatDRAMTest_BLD_DIR}" || printCopyFailMsg
cd ${MatDRAMTest_BLD_DIR}
for file in main.m logfunc.m LICENSE.md; do
if [ -f "${MatDRAMTest_BLD_DIR}/${file}" ]; then
rm "${MatDRAMTest_BLD_DIR}/${file}" || verify $? "MatDRAM test ${file} file removal"
fi
done
echo >&2
cp "${MatDRAMTest_SRC_DIR}/testParaMonte.m" "${MatDRAMTest_BLD_DIR}/testParaMonte.m" || printCopyFailMsg
cp "${MatDRAMTest_SRC_DIR}/getLogFunc.m" "${MatDRAMTest_BLD_DIR}/getLogFunc.m" || printCopyFailMsg
#:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
#: copy the first example to the bin directory
#:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
if [ "${ParaMonteExample_RUN_ENABLED}" = "true" ]; then
for EXAM_NAME in ${EXAM_LIST}; do
echo >&2 "-- ${BUILD_NAME} - Running the MatDRAM library's ${EXAM_NAME} example."
# The MatDRAM library example build and run if requested
MatDRAM_BLD_DIR_CURRENT="${MatDRAM_EXP_DIR}/${EXAM_NAME}"
cd "${MatDRAM_BLD_DIR_CURRENT}" && matlab -batch "main"
if [ $? -eq 0 ]; then
echo >&2 "-- ${BUILD_NAME} - The MatDRAM library example build/run appears to have succeeded."
echo >&2
else
echo >&2 "-- ${BUILD_NAME} - Fatal Error: The MatDRAM library example build/run failed. exiting..."
echo >&2
exit 1
fi
done
fi
echo >&2
echo >&2 "-- ${BUILD_NAME} - the MatDRAM build files are located at: ${MatDRAM_BLD_DIR_CURRENT}"
echo >&2 "-- ${BUILD_NAME} - the MatDRAM library files are located at: ${MatDRAMExample_BIN_DIR_CURRENT}"
echo >&2