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rename to docs/images/usesix.png diff --git a/docs/_images/usethree.png b/docs/images/usethree.png similarity index 100% rename from docs/_images/usethree.png rename to docs/images/usethree.png diff --git a/docs/_images/usetwo.png b/docs/images/usetwo.png similarity index 100% rename from docs/_images/usetwo.png rename to docs/images/usetwo.png diff --git a/docs/introduction/register.md b/docs/introduction/register.md index 8793d17..c04522b 100644 --- a/docs/introduction/register.md +++ b/docs/introduction/register.md @@ -30,7 +30,7 @@ sbatch: error: Job submit/allocate failed: Invalid account or account/partition 用户可在 SCOW 管理平台主页账户信息的仪表盘中查看当前用户可使用账户的余额情况。 -![余额情况](../_images/scow/image17.png) +![余额情况](../images/scow/image17.png) ### 续费 diff --git a/docs/usage/apps/cp2k.md b/docs/usage/apps/cp2k.md index 6ae34da..58a16dd 100644 --- a/docs/usage/apps/cp2k.md +++ b/docs/usage/apps/cp2k.md @@ -5,10 +5,10 @@ CP2K 是可用于DFT计算和分子动力学模拟的强大软件包。它支持 ## 嘉庚智算上的CP2K !!! failure - 目前由于升级后 OpenMPI 的已知问题，目前集群上的 CP2K 仅 `cp2k/2024.3` 和 `cp2k/2024.3-generic` 版本可用。 - 前者由于 Core Dump 等原因未能通过 Regtest（但无数值issue），后者由于17个测试任务的数值不匹配亦未能通过。 + 目前集群上的 CP2K 尚需要测试其可靠性和稳定性。 + - 因此请各位用户在使用时注意自己的结果，我们正在积极解决升级后的集群与 CP2K 的兼容性问题。 + 因此请各位用户在使用时注意自己得到的结果，我们正在积极解决升级后的集群与 CP2K 的兼容性问题。 如对可靠性有较高要求，推荐使用 [CP2K 官方 Singularity 容器镜像](https://github.com/cp2k/cp2k-containers#apptainer-singularity)。 ```bash title="/public/slurmscript_demo/cp2k-2024.3.slurm" diff --git a/docs/usage/apps/index.md b/docs/usage/apps/index.md index d4b29e8..214e9d8 100644 --- a/docs/usage/apps/index.md +++ b/docs/usage/apps/index.md @@ -1,4 +1,4 @@ -# 应用软件 +# 软件使用说明 在快速开始指南的[使用智算上的软件](../quick-start.md#_6)部分中，我们介绍了如何使用 `module` 来加载软件及依赖。 而在[创建作业提交脚本](../quick-start.md#_7)部分中，我们介绍了如何编写一个 Slurm 作业脚本。 diff --git a/docs/usage/login.md b/docs/usage/login.md index 8b6eb05..bf5d2fa 100644 --- a/docs/usage/login.md +++ b/docs/usage/login.md @@ -4,21 +4,44 @@ ## 密钥分发 -用户申请完账号后，管理员会将用户的密钥发送到申请账号时预留的厦大邮箱，按照邮箱指引解压缩附件即可获取到密钥。用户务必妥善保管好该密钥，不得将密钥给与他人使用。 +用户申请账号后，管理员会将用户的密钥发送到申请账号时预留的邮箱中，按照邮箱指引解压缩附件即可获取密钥。 + +**用户务必妥善保管好该密钥，请勿泄露。** ## 登陆系统 +!!! info + 当前集群登录节点 IP 为 10.26.14.64。 + + 仅厦大校内网可以访问，校外用户请通过 SSLVPN 或零信任终端访问。 + +!!! failure + 旧登录节点IP 10.26.14.56 **已停止任务提交**，如遇到作业长久排队且计算节点均显示为 Drain 状态请检查登录节点是否正确。 + ### Windows用户 -#### 通过xshell(version 7)工具登录 +#### 通过 MobaXterm 登录 + +MobaXterm 是 Windows 下一款终端软件，支持SSH、WSL等，并且包含一个集成的 X 桌面服务，允许您远程运行图形应用程序（如 gnuplot、VMD 等）。 + +您可以从以下链接下载 MobaXterm 家庭版（安装版）： + +[安装 MobaXterm](http://mobaxterm.mobatek.net/download-home-edition.html) -![useone](../_images/useone.png) -![usetwo](../_images/usetwo.png) -![usethree](../_images/usethree.png) -![usefour](../_images/usefour.png) -![usefive](../_images/usefive.png) -![usesix](../_images/usesix.png) -![useseven](../_images/useseven.png) +请按下图所示步骤操作，在第④步时请导入邮件中收到的密钥，然后点击 OK 即可登录。 + +![mobaxterm-step1](../images/mobaxterm/login.png) +![mobaxterm-step2](../images/mobaxterm/logged-in.png) + +#### 通过 XShell(version 7) 工具登录 + +![useone](../images/useone.png) +![usetwo](../images/usetwo.png) +![usethree](../images/usethree.png) +![usefour](../images/usefour.png) +![usefive](../images/usefive.png) +![usesix](../images/usesix.png) +![useseven](../images/useseven.png) #### 通过CMD(命令提示符)直接登录 @@ -26,7 +49,7 @@ 将获取到的密钥文件（id_rsa）拷贝到C:\\Users\\user1\\.ssh目录下 -![useeight](../_images/useeight.png) +![useeight](../images/useeight.png) !!! info 说明： @@ -35,19 +58,19 @@ 通过CMD(命令提示符)登录到登录节点，命令为： `ssh account@10.26.14.64`，此处account请替换为实际申请的用户账号。如下： -![usenine](../_images/usenine.png) +![usenine](../images/usenine.png) #### 通过SecureCRT工具登录 以secureCRT version 9.2.3为例： -![use10](../_images/use10.png) -![use11](../_images/use11.png) -![use12](../_images/use12.png) -![use13](../_images/use13.png) -![use14](../_images/use14.png) -![use15](../_images/use15.png) -![use16](../_images/use16.png) +![use10](../images/use10.png) +![use11](../images/use11.png) +![use12](../images/use12.png) +![use13](../images/use13.png) +![use14](../images/use14.png) +![use15](../images/use15.png) +![use16](../images/use16.png) ### MAC电脑用户 @@ -85,7 +108,7 @@ Windows/Linux/Unix/Mac 用户均可通过在命令行终端中使用 `scp` 命 scp -r D:\\data\\ user01@10.26.14.64:/public/home/user01/ ``` -![use16](../_images/use16.png) +![use16](../images/use16.png) 示例2：将集群中用户user01家目录中的~/math.dat文件下载到本地电脑的D:\\data目录下（以下命令在用户本地电脑运行） @@ -93,19 +116,25 @@ scp -r D:\\data\\ user01@10.26.14.64:/public/home/user01/ scp user01@10.26.14.64:/public/home/user01/math.dat D:\\data\\ ``` -![use17](../_images/use17.png) +![use17](../images/use17.png) + +### MobaXterm 传输文件 + +MobaXterm 自身即支持传输文件。登录后在左侧的 Quick connect栏即可右键选择上传文件。 + +![MobaXterm Upload](../images/mobaxterm/upload.png) ### XFTP 传输文件 如果已经装了xftp软件，也可以使用xftp软件进行文件传输： -![use18](../_images/use18.png) -![use19](../_images/use19.png) -![use20](../_images/use20.png) -![use21](../_images/use21.png) -![use22](../_images/use22.png) -![use23](../_images/use23.png) -![use24](../_images/use24.png) +![use18](../images/use18.png) +![use19](../images/use19.png) +![use20](../images/use20.png) +![use21](../images/use21.png) +![use22](../images/use22.png) +![use23](../images/use23.png) +![use24](../images/use24.png) ### SCOW 平台传输文件 diff --git a/docs/usage/scow.md b/docs/usage/scow.md index 32f796d..c398de7 100644 --- a/docs/usage/scow.md +++ b/docs/usage/scow.md @@ -11,7 +11,7 @@ SCOW是一个算力平台系统，旨在解决算力中心在建设和运营中 - 注册：用户需要通过邮箱发送申请表，申请表需用户ID、用户名（、用户邮箱、登录密码（统一设定，后续用户自行修改）；用户可主动联系平台管理员注销账号。管理账号欠费后，账号被封锁，管理账号及其所属上机账号可以继续登录系统，但不可以提交作业，3个月后不可以登录系统，6个月后数据将被删除，管理账号及所属上机账号将被全部注销。 - 登录地址：[http://10.26.14.63:8080/](http://10.26.14.63:8080/)，用户名和密码与集群LDAP以及之前的 CE 一致，如无法登录可联系系统管理员。 - ![登录界面](../_images/scow/image1.png) + ![登录界面](../images/scow/image1.png) - 密码修改：请联系管理员进行修改 @@ -20,77 +20,77 @@ SCOW是一个算力平台系统，旨在解决算力中心在建设和运营中 - 仪表盘：分为两个部分，快捷入口和平台概览 - 快捷入口点击后面的+号可以自定义需要导入的模块 - ![快捷入口](../_images/scow/image4.png) + ![快捷入口](../images/scow/image4.png) - 网页端可提交作业至集群 - 进入scow平台后，点击提交作业 - ![提交作业](../_images/scow/image5.png) + ![提交作业](../images/scow/image5.png) - 需填写命令、分区、qos、节点数、单节点核心数、最长运行时间，确认无误后可点击下面提交按钮（也可以提交时选择保存为模板，方便同类型作业提交） - ![作业参数](../_images/scow/image6.png) + ![作业参数](../images/scow/image6.png) - 如没有报错，提交后会跳转到未结束的作业模块（可以同时选上作业模板，方便同类型作业提交），提交成功和作业ID - ![作业管理](../_images/scow/image7.png) + ![作业管理](../images/scow/image7.png) - 点击作业中的进入目录，可以看到作业标准/错误输出文件，支持下载、重命名、删除、提交 - ![作业详情](../_images/scow/image8.png) + ![作业详情](../images/scow/image8.png) - 集群命令行界面登录：从shell模块中可进入到命令行界面 - ![命令行入口](../_images/scow/image9.png) + ![命令行入口](../images/scow/image9.png) - ![命令行界面](../_images/scow/image10.png) + ![命令行界面](../images/scow/image10.png) - 作业模板：可保存之前提交过的作业脚本 - ![作业模板](../_images/scow/image11.png) + ![作业模板](../images/scow/image11.png) - 支持查看本用户所有历史作业，可按批量搜索（按集群）、精确搜索（按集群+作业ID） - ![历史作业](../_images/scow/image12.png) + ![历史作业](../images/scow/image12.png) - 平台概览：包括集群CPU、GPU空闲可用节点，作业排队情况等 - ![平台概览](../_images/scow/image13.png) + ![平台概览](../images/scow/image13.png) - 交互式应用模块 - 用户可以在此使用平台提供的交互式应用，并提交到集群作业管理系统上，如 Jupyter、 VS Code 等。 - ![交互式应用](../_images/scow/image14.png) + ![交互式应用](../images/scow/image14.png) - 文件管理模块：在网页端可以对自己目录下的文件进行增删改 - ![文件管理](../_images/scow/image15.png) + ![文件管理](../images/scow/image15.png) ### 账户信息 - 点击右上角的"管理系统"，可以跳转到"超算平台"页面 - ![管理系统](../_images/scow/image16.png) + ![管理系统](../images/scow/image16.png) - 仪表盘：账户可用额度，未结束作业列表 - ![仪表盘](../_images/scow/image17.png) + ![仪表盘](../images/scow/image17.png) #### 用户空间模块 - 本用户未结束的作业：按批量搜索（按集群）、精确搜索（按集群+作业ID） - ![未结束作业](../_images/scow/image18.png) + ![未结束作业](../images/scow/image18.png) - 已结束的作业：按批量搜索（按集群）、精确搜索（按集群+作业ID） - ![已结束作业](../_images/scow/image19.png) + ![已结束作业](../images/scow/image19.png) - 集群和分区信息：含分区名、分区节点、单节点核心数、单节点GPU数、单节点内存、QOS、单价、计量方式 - ![集群和分区](../_images/scow/image20.png) + ![集群和分区](../images/scow/image20.png) - 操作日志：支持按行为/结果/时间进行搜索，其日志内容主要记录的是在超算平台界面的操作，如shell登录、作业提交等 - ![操作日志](../_images/scow/image21.png) + ![操作日志](../images/scow/image21.png) #### 账户管理模块 @@ -99,20 +99,20 @@ SCOW是一个算力平台系统，旨在解决算力中心在建设和运营中 - 账户信息：包含了账户信息、用户管理、充值记录、消费记录、操作日志模块 - ![账户信息](../_images/scow/image22.png) + ![账户信息](../images/scow/image22.png) - 未结束的作业：按批量搜索（按集群）、精确搜索（按集群+作业ID） - ![未结束](../_images/scow/image23.png) + ![未结束](../images/scow/image23.png) - 已结束的作业：按批量搜索（按集群）、精确搜索（按集群+作业ID） - ![已结束](../_images/scow/image24.png) + ![已结束](../images/scow/image24.png) - 充值记录：支持按时间/类型搜索，可导出 - ![充值记录](../_images/scow/image26.png) + ![充值记录](../images/scow/image26.png) - 消费记录：支持按用户ID或用户名/时间/类型搜索，可导出 - ![消费记录](../_images/scow/image27.png) + ![消费记录](../images/scow/image27.png)