linter: gonna lint

Author: dshemetov

_delphi_utils_python/delphi_utils/__init__.py

@@ -3,16 +3,16 @@
 
 from __future__ import absolute_import
 
+from delphi_logger import get_structured_logger, pool_and_threadedlogger
+
 from .archive import ArchiveDiffer, GitArchiveDiffer, S3ArchiveDiffer
 from .export import create_export_csv
-from .utils import read_params
-
-from .slack_notifier import SlackNotifier
-from delphi_logger import get_structured_logger, pool_and_threadedlogger
 from .geomap import GeoMapper
-from .smooth import Smoother
-from .signal import add_prefix
 from .nancodes import Nans
+from .signal import add_prefix
+from .slack_notifier import SlackNotifier
+from .smooth import Smoother
+from .utils import read_params
 from .weekday import Weekday
 
 __version__ = "0.3.23"

_delphi_utils_python/delphi_utils/archive.py

@@ -26,25 +26,25 @@
 Created: 2020-08-06
 """
 
-from contextlib import contextmanager
 import filecmp
-from glob import glob
-from os import remove, replace
-from os.path import join, basename, abspath
 import shutil
 import time
-from typing import Tuple, List, Dict, Optional
+from contextlib import contextmanager
+from glob import glob
+from os import remove, replace
+from os.path import abspath, basename, join
+from typing import Dict, List, Optional, Tuple
 
+import numpy as np
+import pandas as pd
 from boto3 import Session
 from boto3.exceptions import S3UploadFailedError
+from delphi_logger import get_structured_logger
 from git import Repo
 from git.refs.head import Head
-import pandas as pd
-import numpy as np
 
-from .utils import read_params
-from delphi_logger import get_structured_logger
 from .nancodes import Nans
+from .utils import read_params
 
 Files = List[str]
 FileDiffMap = Dict[str, Optional[str]]

_delphi_utils_python/delphi_utils/logger.py

@@ -6,4 +6,5 @@
 
 no longer imports from `delphi_utils.logger` directly.
 """
-from delphi_logger import get_structured_logger # pylint: disable=unused-import
+
+from delphi_logger import get_structured_logger  # pylint: disable=unused-import

_delphi_utils_python/delphi_utils/runner.py

@@ -1,16 +1,17 @@
 """Indicator running utilities."""
 import argparse as ap
 import importlib
-import os
-from typing import Any, Callable, Dict, Optional
 import multiprocessing
+import os
 import time
-from .archive import ArchiveDiffer, archiver_from_params
+from typing import Any, Callable, Dict, Optional
+
 from delphi_logger import get_structured_logger
-from .utils import read_params, transfer_files, delete_move_files
-from .validator.validate import Validator
-from .validator.run import validator_from_params
 
+from .archive import ArchiveDiffer, archiver_from_params
+from .utils import delete_move_files, read_params, transfer_files
+from .validator.run import validator_from_params
+from .validator.validate import Validator
 
 Params = Dict[str, Any]
 

_delphi_utils_python/delphi_utils/validator/report.py

@@ -1,9 +1,12 @@
 """Validation output reports."""
 import sys
 from typing import List
+
 from delphi_logger import get_structured_logger
+
 from .errors import ValidationFailure
 
+
 class ValidationReport:
     """Class for reporting the results of validation."""
 

quidel_covidtest/delphi_quidel_covidtest/run.py

@@ -5,30 +5,30 @@
 when the module is run with `python -m MODULE_NAME`.
 """
 import atexit
+import time
 from datetime import datetime
 from multiprocessing import cpu_count
-import time
-from typing import Dict, Any
-
-from delphi_utils import (
-    add_prefix,
-    create_export_csv,
-    get_structured_logger
+from typing import Any, Dict
+
+from delphi_utils import add_prefix, create_export_csv, get_structured_logger, pool_and_threadedlogger
+
+from .backfill import merge_backfill_file, store_backfill_file
+from .constants import (
+    AGE_GROUPS,
+    END_FROM_TODAY_MINUS,
+    NONPARENT_GEO_RESOLUTIONS,
+    PARENT_GEO_RESOLUTIONS,
+    RAW_POSITIVE,
+    RAW_TEST_PER_DEVICE,
+    SENSORS,
+    SMOOTHED_POSITIVE,
+    SMOOTHED_TEST_PER_DEVICE,
+    SMOOTHERS,
 )
-from delphi_utils import pool_and_threadedlogger
-
-from .constants import (END_FROM_TODAY_MINUS,
-                        SMOOTHED_POSITIVE, RAW_POSITIVE,
-                        SMOOTHED_TEST_PER_DEVICE, RAW_TEST_PER_DEVICE,
-                        PARENT_GEO_RESOLUTIONS, SENSORS, SMOOTHERS, NONPARENT_GEO_RESOLUTIONS,
-                        AGE_GROUPS)
-from .generate_sensor import generate_sensor_for_parent_geo, generate_sensor_for_nonparent_geo
+from .generate_sensor import generate_sensor_for_nonparent_geo, generate_sensor_for_parent_geo
 from .geo_maps import geo_map
-from .pull import (pull_quidel_covidtest,
-                   check_export_start_date,
-                   check_export_end_date,
-                   update_cache_file)
-from .backfill import (store_backfill_file, merge_backfill_file)
+from .pull import check_export_end_date, check_export_start_date, pull_quidel_covidtest, update_cache_file
+
 
 def log_exit(start_time, stats, logger):
     """Log at program exit."""