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Merge pull request #558 from cmu-delphi/ds/doc
doc: update from Rachel's comments
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vignettes/epiprocess.Rmd

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@@ -86,7 +86,7 @@ edf %>%
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```
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We can compute the 7 day moving average of the confirmed daily cases for each
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geo_value by using the `epi_slide_mean()` function. For a more in-depth guide to
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`geo_value` by using the `epi_slide_mean()` function. For a more in-depth guide to
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sliding, see `vignette("epi_df")`.
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```{r}
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```
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We can compute the growth rate of the confirmed cumulative cases for each
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geo_value. For a more in-depth guide to growth rates, see `vignette("growth_rate")`.
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`geo_value`. For a more in-depth guide to growth rates, see `vignette("growth_rate")`.
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```{r}
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edf %>%
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group_by(geo_value) %>%
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mutate(cases_growth = growth_rate(x = time_value, y = cases_cumulative, method = "rel_change", h = 7))
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```
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Detect outliers in daily reported cases for each geo_value. For a more in-depth
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Detect outliers in daily reported cases for each `geo_value`. For a more in-depth
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guide to outlier detection, see `vignette("outliers")`.
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```{r message=FALSE}
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ungroup()
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```
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Add a column to the epi_df object with the daily deaths for each geo_value and
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compute the correlations between cases and deaths for each geo_value. For a more
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Add a column to the epi_df object with the daily deaths for each `geo_value` and
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compute the correlations between cases and deaths for each `geo_value`. For a more
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in-depth guide to correlations, see `vignette("correlation")`.
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```{r}

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