Refine type signatures a bit for galaxy-lib.

Author: jmchilton

typeshed/2.7/galaxy/tools/deps/__init__.pyi

@@ -17,7 +17,7 @@ def build_dependency_manager(config): ...
 class NullDependencyManager:
     dependency_resolvers = ...  # type: Any
     def uses_tool_shed_dependencies(self): ...
-    def dependency_shell_commands(self, requirements, **kwds): ...
+    def dependency_shell_commands(self, requirements: ToolRequirements, **kwds) -> List[str]: ...
     def find_dep(self, name, version: Optional[Any] = ..., type: str = ..., **kwds): ...
 
 class DependencyManager:
@@ -27,7 +27,7 @@ class DependencyManager:
     def __init__(self, default_base_path, conf_file: Optional[Any] = ..., app_config: Any = ...) -> None: ...
     def get_resolver_option(self, resolver, key, explicit_resolver_options: Any = ...): ...
     def get_app_option(self, key, default: Optional[Any] = ...): ...
-    def dependency_shell_commands(self, requirements, **kwds): ...
+    def dependency_shell_commands(self, requirements: ToolRequirements, **kwds) -> List[str]: ...
     def requirements_to_dependencies(self, requirements, **kwds): ...
     def uses_tool_shed_dependencies(self): ...
     def find_dep(self, name, version: Optional[Any] = ..., type: str = ..., **kwds): ...
@@ -36,6 +36,6 @@ class CachedDependencyManager(DependencyManager):
     tool_dependency_cache_dir = ...  # type: Any
     def __init__(self, default_base_path, conf_file: Optional[Any] = ..., app_config: Any = ..., tool_dependency_cache_dir: Optional[Any] = ...) -> None: ...
     def build_cache(self, requirements, **kwds): ...
-    def dependency_shell_commands(self, requirements, **kwds): ...
+    def dependency_shell_commands(self, requirements: ToolRequirements, **kwds) -> List[str]: ...
     def hash_dependencies(self, resolved_dependencies): ...
     def get_hashed_dependencies_path(self, resolved_dependencies): ...

typeshed/2.7/galaxy/tools/deps/requirements.pyi

@@ -2,7 +2,7 @@
 #
 # NOTE: This dynamically typed stub was automatically generated by stubgen.
 
-from typing import Any, Optional
+from typing import Any, Dict, List, Optional
 
 DEFAULT_REQUIREMENT_TYPE = ...  # type: str
 DEFAULT_REQUIREMENT_VERSION = ...  # type: Any
@@ -13,10 +13,10 @@ class ToolRequirement:
     version = ...  # type: Any
     specs = ...  # type: Any
     def __init__(self, name: Optional[Any] = ..., type: Optional[Any] = ..., version: Optional[Any] = ..., specs: Any = ...) -> None: ...
-    def to_dict(self): ...
+    def to_dict(self) -> Dict[Any]: ...
     def copy(self): ...
     @staticmethod
-    def from_dict(dict): ...
+    def from_dict(dict: Dict[Any]) -> ToolRequirement: ...
     def __eq__(self, other): ...
     def __ne__(self, other): ...
     def __hash__(self): ...
@@ -31,7 +31,7 @@ class RequirementSpecification:
     def short_name(self): ...
     def to_dict(self): ...
     @staticmethod
-    def from_dict(dict): ...
+    def from_dict(dict: Dict[Any]) -> ToolRequirements: ...
     def __eq__(self, other): ...
     def __ne__(self, other): ...
     def __hash__(self): ...
@@ -40,12 +40,12 @@ class ToolRequirements:
     tool_requirements = ...  # type: Any
     def __init__(self, tool_requirements: Optional[Any] = ...) -> None: ...
     @staticmethod
-    def from_list(requirements): ...
+    def from_list(requirements: List[ToolRequirement]) -> ToolRequirements: ...
     @property
     def resolvable(self): ...
     @property
     def packages(self): ...
-    def to_list(self): ...
+    def to_list(self) -> List[ToolRequirement]: ...
     def append(self, requirement): ...
     def __eq__(self, other): ...
     def __ne__(self, other): ...